genome_name
stringlengths 15
15
| taxid
int64 7
2.75M
| bacformer_genome_embedding
sequencelengths 480
480
| madin_categorical_gram_stain
stringclasses 2
values | madin_categorical_metabolism
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values | madin_categorical_motility_binary
stringclasses 2
values | madin_categorical_motility_type
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values | madin_categorical_sporulation
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values | madin_categorical_range_tmp
stringclasses 7
values | madin_categorical_range_salinity
stringclasses 7
values | madin_categorical_cell_shape
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values | madin_categorical_isolation_source
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values | madin_quantitative_d1_lo
float64 0.1
10
⌀ | madin_quantitative_d1_up
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10
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float64 0.1
51
⌀ | madin_quantitative_d2_up
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66
⌀ | madin_quantitative_optimum_tmp
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102
⌀ | madin_quantitative_optimum_ph
float64 0.75
11.3
⌀ | madin_quantitative_growth_tmp
float64 3
85
⌀ | madin_carbsubs_cellobiose
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1
⌀ | madin_carbsubs_fructose
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⌀ | madin_carbsubs_galactose
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⌀ | madin_carbsubs_glucose
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⌀ | madin_carbsubs_glycerol
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⌀ | madin_carbsubs_lactose
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⌀ | madin_carbsubs_maltose
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⌀ | madin_carbsubs_N-acetylgulcosamine
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⌀ | madin_carbsubs_trehalose
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⌀ | madin_carbsubs_5-ketogluconate
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1
⌀ | madin_carbsubs_xylose
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1
⌀ | madin_carbsubs_adonitol
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1
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⌀ | madin_carbsubs_citrate
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⌀ | madin_carbsubs_fucose
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⌀ | madin_carbsubs_gelatin
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⌀ | madin_carbsubs_myo-inositol
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⌀ | madin_carbsubs_Tween 20
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⌀ | madin_carbsubs_Tween 80
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1
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1
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1
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⌀ | madin_carbsubs_methyl pyruvate
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⌀ | madin_carbsubs_thymidine
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1
⌀ | madin_carbsubs_Tween 40
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1
⌀ | madin_carbsubs_uridine
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1
⌀ | madin_carbsubs_3-hydroxybutyrate
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1
⌀ | madin_carbsubs_valerate
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1
⌀ | madin_carbsubs_glucosamine
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⌀ | madin_carbsubs_urea
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⌀ | madin_carbsubs_methyl beta-D-glucoside
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1
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1
⌀ | madin_carbsubs_galacturonic acid
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1
⌀ | madin_carbsubs_adipate
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⌀ | madin_carbsubs_pyruvic acid methyl ester
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1
⌀ | madin_carbsubs_alpha-cyclodextrin
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1
⌀ | madin_carbsubs_glycogen
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1
⌀ | madin_carbsubs_leucine
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⌀ | madin_carbsubs_threonine
float64 0
1
⌀ | madin_carbsubs_phenylalanine
float64 0
1
⌀ | madin_carbsubs_formic acid
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1
⌀ | madin_carbsubs_phenylacetate
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1
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float64 0
1
⌀ | madin_carbsubs_Tween 60
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1
⌀ | madin_carbsubs_alaninamide
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1
⌀ | madin_carbsubs_quinic acid
float64 0
1
⌀ | madin_carbsubs_alpha-ketovaleric acid
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⌀ | gideon_Adonitol
stringclasses 2
values | gideon_Salicin
stringclasses 2
values | gideon_Catalase
stringclasses 2
values | gideon_Gelatin hydrolysis
stringclasses 2
values | gideon_Coccus
stringclasses 2
values | gideon_Motile
stringclasses 2
values | gideon_Coccus - pairs or chains predominate
stringclasses 2
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values | gideon_Growth on ordinary blood agar
stringclasses 2
values | gideon_Melibiose
stringclasses 2
values | gideon_Spore formation
stringclasses 2
values | gideon_Yellow pigment
stringclasses 2
values | gideon_Nitrate to nitrite
stringclasses 2
values | gideon_Gram positive
stringclasses 2
values | gideon_Anaerobe
stringclasses 2
values | gideon_Glucose oxidizer
stringclasses 2
values | gideon_Gram negative
stringclasses 2
values | gideon_L-Arabinose
stringclasses 2
values | gideon_Gas from glucose
stringclasses 2
values | gideon_Lactose
stringclasses 2
values | gideon_Raffinose
stringclasses 2
values | gideon_L-Rhamnose
stringclasses 2
values | gideon_Bacillus or coccobacillus
stringclasses 2
values | gideon_Indole
stringclasses 2
values | gideon_D-Xylose
stringclasses 2
values | gideon_Growth on MacConkey agar
stringclasses 2
values | gideon_Citrate
stringclasses 2
values | gideon_Urea hydrolysis
stringclasses 2
values | gideon_Glycerol
stringclasses 2
values | gideon_D-Mannitol
stringclasses 2
values | gideon_Trehalose
stringclasses 2
values | gideon_Arginine dihydrolase
stringclasses 2
values | gideon_myo-Inositol
stringclasses 2
values | gideon_ONPG (beta galactosidase)
stringclasses 2
values | gideon_D-Mannose
stringclasses 2
values | gideon_Glucose fermenter
stringclasses 2
values | gideon_Aerobe
stringclasses 2
values | gideon_Oxidase
stringclasses 2
values | gideon_Beta hemolysis
stringclasses 2
values | gideon_Hydrogen sulfide
stringclasses 2
values | gideon_Branching filaments present
stringclasses 2
values | gideon_Facultative
stringclasses 2
values | gideon_Esculin hydrolysis
stringclasses 2
values | gideon_Sucrose
stringclasses 2
values | gideon_D-Sorbitol
stringclasses 2
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | 37 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | 37 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | 37 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | 37 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000412335.2 | 158,484 | [
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] | negative | aerobic | no | null | no | mesophilic | null | bacillus | null | null | null | null | null | 26 | null | 29 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | - | + | + | - | - | + | - | + | + | - | - | - | + | - | - | - | + | - | null | null | null | - | + | - | + | + | + | - | - | + | + | null | - | null | + | + | - | - | null | - | - | + | null | + | - |
GCF_000412595.1 | 1,126 | [
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] | negative | null | yes | null | no | mesophilic | moderate-halophilic | bacillus | host_plant | null | null | null | null | 28 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | positive | aerobic | no | null | yes | mesophilic | null | filament | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000411995.1 | 31,958 | [
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GCF_000486085.1 | 28,901 | [
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] | negative | null | no | null | no | mesophilic | null | bacillus | water_marine | 0.2 | 0.4 | 0.8 | 6.5 | 30 | 7.25 | null | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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GCF_000975115.1 | 676,199 | [
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] | positive | aerobic | no | null | null | mesophilic | null | bacillus | null | null | null | null | null | 28 | null | 28 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000975265.2 | 480,418 | [
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GCF_000975095.1 | 327,095 | [
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GCF_000981035.1 | 270,498 | [
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