genome_name
stringlengths 15
15
| taxid
int64 7
2.75M
| bacformer_genome_embedding
sequencelengths 480
480
| madin_categorical_gram_stain
stringclasses 2
values | madin_categorical_metabolism
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values | madin_categorical_motility_binary
stringclasses 2
values | madin_categorical_motility_type
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values | madin_categorical_sporulation
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stringclasses 7
values | madin_categorical_range_salinity
stringclasses 7
values | madin_categorical_cell_shape
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values | madin_categorical_isolation_source
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values | madin_quantitative_d1_lo
float64 0.1
10
⌀ | madin_quantitative_d1_up
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10
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float64 0.1
51
⌀ | madin_quantitative_d2_up
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66
⌀ | madin_quantitative_optimum_tmp
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102
⌀ | madin_quantitative_optimum_ph
float64 0.75
11.3
⌀ | madin_quantitative_growth_tmp
float64 3
85
⌀ | madin_carbsubs_cellobiose
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1
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⌀ | madin_carbsubs_glycerol
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⌀ | madin_carbsubs_lactose
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⌀ | madin_carbsubs_maltose
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1
⌀ | madin_carbsubs_adonitol
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⌀ | madin_carbsubs_myo-inositol
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⌀ | madin_carbsubs_Tween 40
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⌀ | madin_carbsubs_urea
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⌀ | madin_carbsubs_galacturonic acid
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⌀ | madin_carbsubs_pyruvic acid methyl ester
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⌀ | madin_carbsubs_glycogen
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⌀ | madin_carbsubs_leucine
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⌀ | madin_carbsubs_threonine
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⌀ | madin_carbsubs_phenylalanine
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⌀ | madin_carbsubs_formic acid
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1
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1
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⌀ | madin_carbsubs_Tween 60
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⌀ | madin_carbsubs_alaninamide
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⌀ | madin_carbsubs_quinic acid
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⌀ | madin_carbsubs_alpha-ketovaleric acid
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⌀ | gideon_Adonitol
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values | gideon_Salicin
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stringclasses 2
values | gideon_Gelatin hydrolysis
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values | gideon_Melibiose
stringclasses 2
values | gideon_Spore formation
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values | gideon_Yellow pigment
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values | gideon_Nitrate to nitrite
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values | gideon_Gram positive
stringclasses 2
values | gideon_Anaerobe
stringclasses 2
values | gideon_Glucose oxidizer
stringclasses 2
values | gideon_Gram negative
stringclasses 2
values | gideon_L-Arabinose
stringclasses 2
values | gideon_Gas from glucose
stringclasses 2
values | gideon_Lactose
stringclasses 2
values | gideon_Raffinose
stringclasses 2
values | gideon_L-Rhamnose
stringclasses 2
values | gideon_Bacillus or coccobacillus
stringclasses 2
values | gideon_Indole
stringclasses 2
values | gideon_D-Xylose
stringclasses 2
values | gideon_Growth on MacConkey agar
stringclasses 2
values | gideon_Citrate
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values | gideon_Urea hydrolysis
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values | gideon_Glycerol
stringclasses 2
values | gideon_D-Mannitol
stringclasses 2
values | gideon_Trehalose
stringclasses 2
values | gideon_Arginine dihydrolase
stringclasses 2
values | gideon_myo-Inositol
stringclasses 2
values | gideon_ONPG (beta galactosidase)
stringclasses 2
values | gideon_D-Mannose
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values | gideon_Glucose fermenter
stringclasses 2
values | gideon_Aerobe
stringclasses 2
values | gideon_Oxidase
stringclasses 2
values | gideon_Beta hemolysis
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values | gideon_Hydrogen sulfide
stringclasses 2
values | gideon_Branching filaments present
stringclasses 2
values | gideon_Facultative
stringclasses 2
values | gideon_Esculin hydrolysis
stringclasses 2
values | gideon_Sucrose
stringclasses 2
values | gideon_D-Sorbitol
stringclasses 2
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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] | null | obligate aerobic | no | null | null | null | null | bacillus | water_fresh | 1.25 | null | 2.5 | null | 22.5 | 6.1 | 25 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | obligate anaerobic | yes | null | yes | mesophilic | null | null | null | null | null | null | null | 30 | 7.5 | 30 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000176435.1 | 666 | [
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | 25 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000176395.1 | 666 | [
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | 25 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_ectotherm | null | null | null | null | 25 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000176535.2 | 562 | [
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000176675.2 | 562 | [
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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GCF_000176835.2 | 82,996 | [
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | bioreactor/digester | null | null | null | null | 26 | 6.8 | 29 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | - | + | + | null | - | null | - | + | + | + | - | - | + | - | - | - | + | + | null | null | + | - | + | - | + | + | null | - | null | + | + | - | null | null | + | + | - | - | null | - | - | + | null | + | null |
GCF_000176575.2 | 562 | [
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] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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0.16779647767543793
] | negative | facultative | yes | null | no | mesophilic | null | bacillus | host_animal_endotherm | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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