language: rna
tags:
- Biology
- RNA
license:
- agpl-3.0
size_categories:
- 100K<n<1M
source_datasets:
- multimolecule/pdb
task_categories:
- text-generation
- fill-mask
task_ids:
- language-modeling
- masked-language-modeling
pretty_name: pdb-rna_secondary_structure
library_name: multimolecule
pdb-rna_secondary_structure
The pdb-rna_secondary_structure dataset is in beta test. This dataset card may not accurately reflects the data content. The data content and this dataset card may subject to change.
Please contact the MultiMolecule team on GitHub issues should you have any feedback.
This dataset is converted from the dataset released by the authors of SPOT-RNA. The MultiMolecule is aware of a potential issue in data quality. We are working on cleaning the dataset.
RCSB Protein Data Bank (RCSB PDB) enables breakthroughs in science and education by providing access and tools for exploration, visualization, and analysis of:
- Experimentally-determined 3D structures from the Protein Data Bank (PDB) archive
- Computed Structure Models (CSM) from AlphaFold DB and ModelArchive
The PDB-rna_secondary_structure is a subset of the PDB dataset focusing on the secondary structure of RNA.
Disclaimer
This is an UNOFFICIAL release of the RNA Secondary Structure data in the Protein Data Bank.
The team releasing Protein Data Bank did not write this dataset card for this dataset so this dataset card has been written by the MultiMolecule team.
Dataset Description
- Homepage: https://multimolecule.danling.org/datasets/pdb-rna_secondary_structure
- datasets: https://huggingface.co/datasets/multimolecule/pdb-rna_secondary_structure
- Point of Contact: RCSB PDB
Example Entry
| id | sequence | secondary_structure |
|---|---|---|
| 1c0a-1-B | GGAGCGGUAGUUCAGUCGGUUAGAAUACCUGC... | (((((((([{{[[)<..AB).)]]}}(((... |
License
This dataset is licensed under the AGPL-3.0 License.
SPDX-License-Identifier: AGPL-3.0-or-later