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  1. README.md +69 -0
  2. evaluation.parquet +3 -0
  3. test.parquet +3 -0
  4. train.parquet +3 -0
  5. validation.parquet +3 -0
README.md ADDED
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+ ---
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+ language: rna
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+ tags:
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+ - Biology
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+ - RNA
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+ license:
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+ - agpl-3.0
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+ size_categories:
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+ - 100K<n<1M
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+ source_datasets:
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+ - multimolecule/pdb
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+ task_categories:
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+ - text-generation
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+ - fill-mask
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+ task_ids:
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+ - language-modeling
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+ - masked-language-modeling
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+ pretty_name: pdb-rna_secondary_structure
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+ library_name: multimolecule
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+ ---
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+
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+ # pdb-rna_secondary_structure
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+
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+ > [!IMPORTANT]
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+ > The pdb-rna_secondary_structure dataset is in beta test.
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+ > This dataset card may not accurately reflects the data content.
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+ > The data content and this dataset card may subject to change.
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+ >
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+ > Please contact the MultiMolecule team on GitHub issues should you have any feedback.
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+
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+ > [!CAUTION]
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+ > This dataset is converted from the dataset released by the authors of SPOT-RNA.
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+ > The MultiMolecule is aware of a potential issue in data quality.
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+ > We are working on cleaning the dataset.
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+
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+ ![pdb-rna_secondary_structure](https://cdn.rcsb.org/rcsb-pdb/v2/common/images/rcsb_logo.png)
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+
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+ RCSB Protein Data Bank (RCSB PDB) enables breakthroughs in science and education by providing access and tools for exploration, visualization, and analysis of:
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+
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+ - Experimentally-determined 3D structures from the Protein Data Bank (PDB) archive
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+ - Computed Structure Models (CSM) from AlphaFold DB and ModelArchive
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+
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+ The PDB-rna_secondary_structure is a subset of the PDB dataset focusing on the secondary structure of RNA.
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+
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+ ## Disclaimer
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+
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+ This is an UNOFFICIAL release of the RNA Secondary Structure data in the [Protein Data Bank](https://www.rcsb.org).
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+
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+ **The team releasing Protein Data Bank did not write this dataset card for this dataset so this dataset card has been written by the MultiMolecule team.**
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+
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+ ## Dataset Description
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+
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+ - **Homepage**: https://multimolecule.danling.org/datasets/pdb-rna_secondary_structure
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+ - **datasets**: https://huggingface.co/datasets/multimolecule/pdb-rna_secondary_structure
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+ - **Point of Contact**: [RCSB PDB](https://www.rcsb.org/pages/contactus)
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+
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+ ## Example Entry
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+
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+ | id | sequence | secondary_structure |
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+ | -------- | ----------------------------------- | -------------------------------- |
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+ | 1c0a-1-B | GGAGCGGUAGUUCAGUCGGUUAGAAUACCUGC... | (((((((([{{[[)<..AB).)]]}}(((... |
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+
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+ ## License
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+
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+ This dataset is licensed under the [AGPL-3.0 License](https://www.gnu.org/licenses/agpl-3.0.html).
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+
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+ ```spdx
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+ SPDX-License-Identifier: AGPL-3.0-or-later
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+ ```
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