genome_name
stringlengths 15
15
| taxid
int64 7
2.75M
| bacformer_genome_embedding
sequencelengths 480
480
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stringclasses 2
values | madin_categorical_metabolism
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values | madin_categorical_motility_binary
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values | madin_categorical_motility_type
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values | madin_categorical_range_tmp
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values | madin_categorical_range_salinity
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values | madin_categorical_cell_shape
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values | madin_categorical_isolation_source
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10
⌀ | madin_quantitative_d1_up
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10
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51
⌀ | madin_quantitative_d2_up
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66
⌀ | madin_quantitative_optimum_tmp
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102
⌀ | madin_quantitative_optimum_ph
float64 0.75
11.3
⌀ | madin_quantitative_growth_tmp
float64 3
85
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1
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⌀ | madin_carbsubs_glucose
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⌀ | madin_carbsubs_maltose
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⌀ | madin_carbsubs_N-acetylgulcosamine
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⌀ | madin_carbsubs_trehalose
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⌀ | madin_carbsubs_sorbitol
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⌀ | madin_carbsubs_sucrose
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1
⌀ | madin_carbsubs_xylose
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1
⌀ | madin_carbsubs_adonitol
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1
⌀ | madin_carbsubs_alanine
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⌀ | madin_carbsubs_gelatin
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⌀ | madin_carbsubs_myo-inositol
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1
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1
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⌀ | madin_carbsubs_methyl pyruvate
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⌀ | madin_carbsubs_thymidine
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1
⌀ | madin_carbsubs_Tween 40
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1
⌀ | madin_carbsubs_uridine
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⌀ | madin_carbsubs_3-hydroxybutyrate
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1
⌀ | madin_carbsubs_valerate
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⌀ | madin_carbsubs_methyl beta-D-glucoside
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1
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1
⌀ | madin_carbsubs_galacturonic acid
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1
⌀ | madin_carbsubs_adipate
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1
⌀ | madin_carbsubs_pyruvic acid methyl ester
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1
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1
⌀ | madin_carbsubs_glycogen
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1
⌀ | madin_carbsubs_leucine
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1
⌀ | madin_carbsubs_threonine
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1
⌀ | madin_carbsubs_phenylalanine
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1
⌀ | madin_carbsubs_formic acid
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1
⌀ | madin_carbsubs_phenylacetate
float64 0
1
⌀ | madin_carbsubs_glycine
float64 0
1
⌀ | madin_carbsubs_Tween 60
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1
⌀ | madin_carbsubs_alaninamide
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1
⌀ | madin_carbsubs_quinic acid
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1
⌀ | madin_carbsubs_alpha-ketovaleric acid
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⌀ | gideon_Adonitol
stringclasses 2
values | gideon_Salicin
stringclasses 2
values | gideon_Catalase
stringclasses 2
values | gideon_Gelatin hydrolysis
stringclasses 2
values | gideon_Coccus
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values | gideon_Motile
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values | gideon_Growth on ordinary blood agar
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values | gideon_Melibiose
stringclasses 2
values | gideon_Spore formation
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values | gideon_Yellow pigment
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values | gideon_Nitrate to nitrite
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values | gideon_Gram positive
stringclasses 2
values | gideon_Anaerobe
stringclasses 2
values | gideon_Glucose oxidizer
stringclasses 2
values | gideon_Gram negative
stringclasses 2
values | gideon_L-Arabinose
stringclasses 2
values | gideon_Gas from glucose
stringclasses 2
values | gideon_Lactose
stringclasses 2
values | gideon_Raffinose
stringclasses 2
values | gideon_L-Rhamnose
stringclasses 2
values | gideon_Bacillus or coccobacillus
stringclasses 2
values | gideon_Indole
stringclasses 2
values | gideon_D-Xylose
stringclasses 2
values | gideon_Growth on MacConkey agar
stringclasses 2
values | gideon_Citrate
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values | gideon_Urea hydrolysis
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values | gideon_Glycerol
stringclasses 2
values | gideon_D-Mannitol
stringclasses 2
values | gideon_Trehalose
stringclasses 2
values | gideon_Arginine dihydrolase
stringclasses 2
values | gideon_myo-Inositol
stringclasses 2
values | gideon_ONPG (beta galactosidase)
stringclasses 2
values | gideon_D-Mannose
stringclasses 2
values | gideon_Glucose fermenter
stringclasses 2
values | gideon_Aerobe
stringclasses 2
values | gideon_Oxidase
stringclasses 2
values | gideon_Beta hemolysis
stringclasses 2
values | gideon_Hydrogen sulfide
stringclasses 2
values | gideon_Branching filaments present
stringclasses 2
values | gideon_Facultative
stringclasses 2
values | gideon_Esculin hydrolysis
stringclasses 2
values | gideon_Sucrose
stringclasses 2
values | gideon_D-Sorbitol
stringclasses 2
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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] | negative | aerobic | yes | null | no | null | null | bacillus | host_animal_endotherm | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | positive | facultative | no | null | no | mesophilic | null | bacillus | host_animal_endotherm_oral | 0.9 | 1 | 3.3 | 6.1 | 37 | null | 37 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000429585.1 | 269,774 | [
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] | negative | facultative | null | flagella | no | null | null | bacillus | water_fresh | 0.4 | null | 1.65 | null | 37.5 | 7.5 | 28 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000429345.1 | 348,842 | [
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] | positive | anaerobic | yes | flagella | yes | thermophilic | null | bacillus | rock_deep | 0.8 | 1 | 2 | 6 | 70.5 | 7.05 | 70 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000429525.1 | 392,016 | [
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] | positive | null | yes | null | yes | thermophilic | null | bacillus | soil | 0.8 | 0.9 | 4 | 5 | 52.5 | 4.25 | 55 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | null | no | null | no | mesophilic | null | bacillus | host_animal_ectotherm | 0.3 | null | null | null | 30 | null | 28 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000429125.1 | 487,317 | [
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] | negative | obligate aerobic | no | null | null | null | null | bacillus | null | 0.35 | null | 2.5 | null | 25 | 7 | 25 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000429425.1 | 226,504 | [
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] | negative | obligate aerobic | yes | flagella | no | mesophilic | null | bacillus | null | 0.1 | 0.2 | 1.5 | 2 | 30 | 7 | 28 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | aerobic | no | null | no | mesophilic | halophilic | bacillus | water_marine | 0.4 | 0.6 | 2 | 3 | 37 | null | 35 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000429465.1 | 426,371 | [
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] | negative | null | no | null | null | mesophilic | halotolerant | bacillus | null | null | 0.5 | null | 2.5 | 23.5 | null | 28 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000429545.1 | 228,955 | [
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] | negative | null | yes | flagella | null | mesophilic | null | bacillus | null | null | 1.2 | null | 2.7 | 27.5 | 8 | 28 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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GCF_000429365.1 | 337,702 | [
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] | negative | null | no | null | no | mesophilic | null | coccobacillus | null | null | 1.2 | null | 2 | 25 | 7 | 28 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000429305.1 | 102,109 | [
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] | negative | facultative | no | null | no | null | null | bacillus | host_animal_endotherm | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | facultative | no | null | no | null | null | bacillus | host_animal_endotherm | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000286475.1 | 1,105,032 | [
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] | negative | aerobic | no | null | no | null | null | bacillus | host_animal_endotherm | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
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] | negative | anaerobic | no | null | no | null | null | bacillus | host_animal_endotherm | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
GCF_000286315.1 | 1,211,706 | [
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