
uuid
large_string | kingdom
large_string | phylum
large_string | class
large_string | order
large_string | family
large_string | genus
large_string | species
large_string | scientific_name
large_string | common
large_string | source_id
large_string | data_source
large_string | publisher
large_string | basisOfRecord
large_string | img_type
large_string | shard_filename
large_string | shard_file_path
large_string | base_dataset_file_path
large_string |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
cf1e8d10-1449-4e75-b19a-9a6b848590a9 | Animalia | Chordata | Mammalia | Rodentia | Sciuridae | Otospermophilus | Otospermophilus beecheyi | Otospermophilus beecheyi (Richardson, 1829) | California ground squirrel | 4145372972 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-05970.tar | 200M_v1.1/224x224/shards/shard-05970.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_004421dc-d24b-4c11-810b-6159f8207152.parquet |
a3aac9ea-312d-49d1-855d-95cdb9f7ee05 | Animalia | Chordata | Aves | Passeriformes | Pachycephalidae | Pachycephala | Pachycephala pectoralis | Pachycephala pectoralis (Latham, 1802) | Australian golden whistler | 3859876243 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-21505.tar | 200M_v1.1/224x224/shards/shard-21505.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_44053f9b-b193-4ff9-b7b4-4d00fd01aa71.parquet |
b6e0fe03-896b-4c23-a852-5d3bb6396f26 | Animalia | Chordata | Aves | Columbiformes | Columbidae | Zenaida | Zenaida asiatica | Zenaida asiatica (Linnaeus, 1758) | White-winged dove | 1986594914 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-14814.tar | 200M_v1.1/224x224/shards/shard-14814.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_dcdb255d-5b67-4859-a767-9d782d3cd266.parquet |
932f4914-ca0a-4c80-bc42-3a700c61d5e3 | Plantae | Tracheophyta | Magnoliopsida | Aquifoliales | Aquifoliaceae | Ilex | Ilex verticillata | Ilex verticillata (L.) A.Gray | Virginia winterberry | 4011574723 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-16656.tar | 200M_v1.1/224x224/shards/shard-16656.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_bc58aa9e-083e-4dc8-965b-f8f2949d71f7.parquet |
c390b5a0-521b-43af-85ea-9df175a3baca | Fungi | Basidiomycota | Agaricomycetes | Russulales | Hericiaceae | Hericium | Hericium erinaceus | Hericium erinaceus (Bull.) Pers. | Bearded tooth | 2013739873 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-11874.tar | 200M_v1.1/224x224/shards/shard-11874.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_0a993e2b-bcb2-46ca-b8b3-70e0a7aed96d.parquet |
68cebee5-e9e8-4992-9557-b81cb6700c47 | Animalia | Arthropoda | Insecta | Coleoptera | Chrysomelidae | Dicranosterna | null | Dicranosterna Motschoulsky, 1860 | Dicranosterna Motschoulsky, 1860 | 4039466417 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-11354.tar | 200M_v1.1/224x224/shards/shard-11354.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_4a7895ef-e4b2-47e1-912f-d9994952878d.parquet |
78ca4912-d67d-4447-a928-76b1a1c2ad45 | Plantae | Tracheophyta | Pinopsida | Pinales | Pinaceae | Larix | Larix laricina | Larix laricina (Du Roi) K.Koch | American larch | 1273849038 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-14328.tar | 200M_v1.1/224x224/shards/shard-14328.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_c2d69bd1-218e-44bf-954a-157d5726b035.parquet |
caf97398-0347-4f6a-8be6-f71bd180a227 | Animalia | Arthropoda | Malacostraca | Decapoda | Palaemonidae | Laomenes | Laomenes pardus | Laomenes pardus Marin, 2009 | Laomenes pardus Marin, 2009 | 21614818_46515914 | eol | null | null | Unidentified | shard-22321.tar | 200M_v1.1/224x224/shards/shard-22321.tar | data/source=eol/server=content.eol.org/data_9986bb67-31c4-42a4-b076-66afff90ad03.parquet |
10d14c91-0b9c-4a83-a17a-c101a1c0813e | Animalia | Arthropoda | Insecta | Lepidoptera | Lycaenidae | Callophrys | Callophrys rubi | Callophrys rubi (Linnaeus, 1758) | Green hairstreak | 3302486840 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-07594.tar | 200M_v1.1/224x224/shards/shard-07594.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_3ecf217f-5440-4140-b4c4-5513ffc32d9d.parquet |
50c40e56-0acb-4f99-9dcf-a10779a92c81 | Plantae | Tracheophyta | Liliopsida | Asparagales | Asparagaceae | Yucca | Yucca glauca | Yucca glauca Nutt. | Great plains yucca | 4600052949 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-09107.tar | 200M_v1.1/224x224/shards/shard-09107.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_d546edf1-de03-4bb4-94ca-125dc671d43c.parquet |
e3fa3837-c5fd-4bfe-8724-7cfcff3f8fbe | Plantae | Tracheophyta | Magnoliopsida | Myrtales | Onagraceae | Circaea | Circaea canadensis | Circaea canadensis (L.) Hill | Broad-leaved enchanter's nightshade | 1837096381 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-00780.tar | 200M_v1.1/224x224/shards/shard-00780.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_ec8168a6-b1ed-4c2f-b6aa-e968adcb84a2.parquet |
53d8c57e-b0cb-4846-997d-0ceaf01b83be | Chromista | Ochrophyta | Phaeophyceae | Laminariales | Lessoniaceae | Ecklonia | Ecklonia radiata | Ecklonia radiata (C.Agardh) J.Agardh | Ecklonia radiata (C.Agardh) J.Agardh | 3759517946 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-07724.tar | 200M_v1.1/224x224/shards/shard-07724.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_776895f3-abff-41d3-923e-cd9b51ac9ba5.parquet |
37825fc7-4ecd-401d-b99c-2986fc7e7f38 | Plantae | Tracheophyta | Magnoliopsida | Rosales | Rosaceae | Rubus | Rubus chamaemorus | Rubus chamaemorus L. | Cloudberry | 1144167904 | gbif | University of Bergen | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-07879.tar | 200M_v1.1/224x224/shards/shard-07879.tar | data/source=gbif/server=www.unimus.no/data_e51036d6-5508-4472-a03c-ea353b174980.parquet |
b0e5e553-a5bc-4401-b749-eb2139fd56fd | Animalia | Arthropoda | Insecta | Coleoptera | Dasytidae | Aplocnemus | Aplocnemus impressus | Aplocnemus impressus (Marsham, 1802) | Aplocnemus impressus (Marsham, 1802) | 2593030606 | gbif | SLU Artdatabanken | HUMAN_OBSERVATION | Citizen Science | shard-15946.tar | 200M_v1.1/224x224/shards/shard-15946.tar | data/source=gbif/server=www.artportalen.se/data_0b61aabc-7ea3-417a-9287-a6e631ac46f2.parquet |
820e56a2-4c20-4a0b-a696-4879e120ac41 | Animalia | Arthropoda | Insecta | Lepidoptera | Zygaenidae | Zygaena | Zygaena transalpina | Zygaena transalpina Esper, 1780 | Southern six spot burnet | 3455226681 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-07725.tar | 200M_v1.1/224x224/shards/shard-07725.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_bea60b51-5c49-4e5e-8d85-c10459f247e0.parquet |
d0caebda-85d3-46fc-978e-58ca4c7d5cfd | Animalia | Chordata | Squamata | null | Colubridae | Coluber | Coluber constrictor | Coluber constrictor Linnaeus, 1758 | Eastern racer | 2862388309 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-08423.tar | 200M_v1.1/224x224/shards/shard-08423.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_5ae36d93-9803-47c5-9db8-53f6aa782efc.parquet |
22929263-c034-4729-89e5-54dc0b0a288e | Plantae | Tracheophyta | Magnoliopsida | Sapindales | Burseraceae | Bursera | Bursera epinnata | Bursera epinnata (Rose) Engl. | Bursera epinnata (Rose) Engl. | 4431168838 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-03932.tar | 200M_v1.1/224x224/shards/shard-03932.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_64299895-6967-4c4d-b923-7c15c9866503.parquet |
2962ea0d-0cb4-40b1-b3cd-8012ba5484eb | Plantae | Tracheophyta | Magnoliopsida | Asterales | Asteraceae | Othonna | Othonna triplinervia | Othonna triplinervia DC. | Othonna triplinervia DC. | 2823104349 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-12597.tar | 200M_v1.1/224x224/shards/shard-12597.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_29671ec6-8735-4e27-8304-e0fbc6b76d63.parquet |
b3ae4d8d-ff6a-476e-aafe-60f4a3b0ce91 | Animalia | Chordata | Aves | Accipitriformes | Accipitridae | Buteo | Buteo lineatus | Buteo lineatus (Gmelin, 1788) | Red-shouldered hawk | 3399175279 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-19485.tar | 200M_v1.1/224x224/shards/shard-19485.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_740295c5-7848-4295-ad5f-067356c4a47c.parquet |
e90c785d-2dca-4d1e-8676-168dbd1d68bc | Plantae | Tracheophyta | Magnoliopsida | Rosales | Moraceae | Ficus | Ficus casearioides | Ficus casearioides King | Ficus casearioides King | 2513901404 | gbif | Naturalis Biodiversity Center | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-02115.tar | 200M_v1.1/224x224/shards/shard-02115.tar | data/source=gbif/server=medialib.naturalis.nl/data_d3671a8d-03ca-4b42-8fe5-cc07c39c1b29.parquet |
cd52572e-8512-409e-bbf3-39ab75072b70 | Animalia | Arthropoda | Insecta | Lepidoptera | Nymphalidae | Aglais | Aglais urticae | Aglais urticae (Linnaeus, 1758) | Small tortoiseshell | 3760323644 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-16823.tar | 200M_v1.1/224x224/shards/shard-16823.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_2784101b-a418-4bf3-9dfc-362ded6d5c9f.parquet |
36d36239-c0fe-479f-a5cf-00df23bad1d0 | Animalia | Arthropoda | Insecta | Lepidoptera | Nymphalidae | Marpesia | Marpesia petreus | Marpesia petreus (Cramer, 1776) | Red dagger wing | 4519199542 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-06394.tar | 200M_v1.1/224x224/shards/shard-06394.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_41a3045a-f878-478e-927c-53d5b040c471.parquet |
6e8a2e2a-ac28-4310-ad64-70a7a01afa9c | Fungi | Basidiomycota | Agaricomycetes | Agaricales | Physalacriaceae | Armillaria | Armillaria mellea | Armillaria mellea (Vahl) P.Kumm. | Honey fungus | 3044850622 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-06336.tar | 200M_v1.1/224x224/shards/shard-06336.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_4280d893-81b0-43d5-90b9-8dfa8387176b.parquet |
02c351bc-01b6-4e1d-ab26-76e437cff52e | Plantae | Tracheophyta | Magnoliopsida | Fagales | Betulaceae | Betula | Betula pubescens | Betula pubescens Ehrh. | Downy birch | 4459158166 | gbif | Finnish Biodiversity Information Facility | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-06507.tar | 200M_v1.1/224x224/shards/shard-06507.tar | data/source=gbif/server=id.digitarium.fi/data_fbdf8da9-8222-4c97-bf58-f19129eb5b26.parquet |
e61f52b2-733e-4524-8476-86a4e69950f8 | Fungi | Basidiomycota | Agaricomycetes | Agaricales | Physalacriaceae | Strobilurus | Strobilurus stephanocystis | Strobilurus stephanocystis (Kühner & Romagn. ex Hora) Singer | Russian conecap | 2330243220 | gbif | naturgucker.de | HUMAN_OBSERVATION | Citizen Science | shard-16057.tar | 200M_v1.1/224x224/shards/shard-16057.tar | data/source=gbif/server=live.staticflickr.com/data_858201af-714d-4b93-9a88-330b2cee0f35.parquet |
8f128468-5171-4938-8f1a-b451e743b35c | Animalia | Arthropoda | Malacostraca | Isopoda | Ligiidae | Ligia | Ligia oceanica | Ligia oceanica (Linnaeus, 1767) | Sea slater | 2818702140 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-13186.tar | 200M_v1.1/224x224/shards/shard-13186.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_085e39f1-57ec-4268-818d-a5c55a949395.parquet |
e1a46d3d-9c08-46a8-a8d0-d3187b0e78cb | Animalia | Arthropoda | Insecta | Lepidoptera | Noctuidae | Noctua | Noctua pronuba | Noctua pronuba Linnaeus, 1758 | Large yellow underwing | 4022153738 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-11972.tar | 200M_v1.1/224x224/shards/shard-11972.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_59a64f13-7c4f-4a88-a67b-c3b7fee43d62.parquet |
537be989-da3c-4a8d-ab37-7eeddd298b6e | Plantae | Tracheophyta | Magnoliopsida | Cornales | Cornaceae | Cornus | Cornus sanguinea | Cornus sanguinea L. | Dogwood | 2643949852 | gbif | Pl@ntNet | HUMAN_OBSERVATION | Citizen Science | shard-16505.tar | 200M_v1.1/224x224/shards/shard-16505.tar | data/source=gbif/server=bs.plantnet.org/data_fb4a949d-f30b-44ec-a810-6cf86b456265.parquet |
e6d78d2f-f2ff-4bb7-bc17-00280c08407a | Animalia | Arthropoda | Insecta | Diptera | Dryomyzidae | Dryomyza | Dryomyza anilis | Dryomyza anilis Fallén, 1820 | Marsh fly | 2822888428 | gbif | The Norwegian Biodiversity Information Centre (NBIC) | HUMAN_OBSERVATION | Citizen Science | shard-14002.tar | 200M_v1.1/224x224/shards/shard-14002.tar | data/source=gbif/server=www.artsobservasjoner.no/data_82f28924-8313-4d46-89c5-0d6fde881ab8.parquet |
2a961cdf-23e9-400b-b403-dddd988ed862 | Animalia | Arthropoda | Insecta | Coleoptera | Chrysomelidae | Coptocephala | Coptocephala rubicunda | Coptocephala rubicunda (Laicharting, 1781) | Coptocephala rubicunda (Laicharting, 1781) | 4037440959 | gbif | Natural History Museum | PRESERVED_SPECIMEN | Museum Specimen: Insect | shard-03857.tar | 200M_v1.1/224x224/shards/shard-03857.tar | data/source=gbif/server=data.nhm.ac.uk/data_f9265a3d-5485-4231-a26f-9ea8c667a2b7.parquet |
5ae8b09a-276f-420c-a8ad-5f686e327b56 | Animalia | Arthropoda | Insecta | Lepidoptera | Saturniidae | Epiphora | Epiphora ploetzi | BOLD:ACF4769 | BOLD:ACF4769 | 1416119480 | gbif | The International Barcode of Life Consortium | MATERIAL_SAMPLE | Museum Specimen: Insect | shard-08300.tar | 200M_v1.1/224x224/shards/shard-08300.tar | data/source=gbif/server=www.boldsystems.org/data_f71422ae-651d-4491-8651-3be4d6b8c128.parquet |
d15a7437-5ba7-4163-918f-411217dda425 | Plantae | Tracheophyta | Magnoliopsida | Ericales | Primulaceae | Primula | Primula vulgaris | Primula vulgaris Huds. | Primrose | 4102867888 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-18695.tar | 200M_v1.1/224x224/shards/shard-18695.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_5ec30797-d167-4b71-be20-2bb65195bcb5.parquet |
1d016bf9-52c4-4fe2-a071-f70c616079a7 | Animalia | Arthropoda | Insecta | Lepidoptera | Nymphalidae | Nymphalis | Nymphalis californica | Nymphalis californica (Boisduval, 1852) | California tortoiseshell | 3383888392 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-14606.tar | 200M_v1.1/224x224/shards/shard-14606.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_d54c5830-448f-466f-a8b9-ac1eba736246.parquet |
098ea5e1-56f8-4f93-84d6-d3cb82e8d43c | Plantae | Tracheophyta | Magnoliopsida | Gentianales | Rubiaceae | Galium | Galium boreale | Galium boreale L. | Northern bedstraw | 607598217 | gbif | MNHN - Museum national d'Histoire naturelle | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-05215.tar | 200M_v1.1/224x224/shards/shard-05215.tar | data/source=gbif/server=mediaphoto.mnhn.fr/data_2d846336-6d85-49da-8084-1906a82e7631.parquet |
e3413c7f-e3e7-4a62-a2fc-d75d8facc4a0 | Animalia | Arthropoda | Insecta | Hymenoptera | Apidae | Apis | Apis mellifera | Apis mellifera Linnaeus, 1758 | Honey bee | 4413882737 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-13309.tar | 200M_v1.1/224x224/shards/shard-13309.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_fe4d11e5-2b58-4cc9-8aee-4e71c44b2ab2.parquet |
5b58823c-c158-4e94-bf12-c5736c1a2b71 | Animalia | Chordata | Aves | Anseriformes | Anatidae | Mergellus | Mergellus albellus | Mergellus albellus (Linnaeus, 1758) | salskrake | 3768029474 | gbif | SLU Artdatabanken | HUMAN_OBSERVATION | Citizen Science | shard-10991.tar | 200M_v1.1/224x224/shards/shard-10991.tar | data/source=gbif/server=www.artportalen.se/data_6d318fe5-590f-43fe-93df-a43423e98c93.parquet |
ac1cfaeb-5e41-4d00-bdf1-face37495e02 | Plantae | Tracheophyta | Magnoliopsida | Apiales | Apiaceae | Heracleum | Heracleum sphondylium | Heracleum sibiricum L. | Hogweed | 3314153483 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-07874.tar | 200M_v1.1/224x224/shards/shard-07874.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_b54d36db-ade9-4a67-b754-5f588ed424e2.parquet |
c98bb464-7bef-4167-a26c-4ebc9e515b23 | Plantae | Tracheophyta | Magnoliopsida | Caryophyllales | Caryophyllaceae | Dianthus | Dianthus carthusianorum | Dianthus carthusianorum L. | Carthusian pink | 4600054175 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-08006.tar | 200M_v1.1/224x224/shards/shard-08006.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_6daeb9f4-720e-4e3a-a050-78b29fea1ef2.parquet |
e5d8250a-9925-4a11-8c44-6539b5a02a79 | Animalia | Chordata | Aves | Passeriformes | Regulidae | Regulus | Regulus calendula | Corthylio calendula (Linnaeus, 1766) | Ruby-crowned kinglet | 4454078998 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-06920.tar | 200M_v1.1/224x224/shards/shard-06920.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_a9b70d12-0111-4195-874d-e21efcd7c13e.parquet |
d5cda933-b054-4eae-ac2e-58be9f8aaf85 | Animalia | Chordata | Aves | Passeriformes | Corvidae | Aphelocoma | Aphelocoma ultramarina | Aphelocoma ultramarina (Bonaparte, 1825) | Transvolcanic Jay | 2243672905 | gbif | Xeno-canto Foundation for Nature Sounds | HUMAN_OBSERVATION | Citizen Science | shard-00796.tar | 200M_v1.1/224x224/shards/shard-00796.tar | data/source=gbif/server=xeno-canto.org/data_548858da-b3cd-41de-9200-ae05141f598b.parquet |
d6ca78eb-8170-4e55-8b7f-0e85e5e428e3 | Animalia | Arthropoda | Insecta | Lepidoptera | Nymphalidae | Dione | Dione vanillae | Dione vanillae (Linnaeus, 1758) | Gulf fritillary | 3873220303 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-00451.tar | 200M_v1.1/224x224/shards/shard-00451.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_201511d2-ea5c-4974-a3d8-68b51e6f90ac.parquet |
a957f670-6acc-482e-9cfc-b8803694426f | Animalia | Arthropoda | Arachnida | Araneae | Theridiidae | Cryptachaea | Cryptachaea veruculata | Cryptachaea veruculata (Urquhart, 1886) | Cryptachaea veruculata (Urquhart, 1886) | 4442346313 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-13318.tar | 200M_v1.1/224x224/shards/shard-13318.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_41a8d2d7-8d49-4b2d-aa0a-8cb116266661.parquet |
d729873b-295a-4442-8ca2-e9f2eb4a12c1 | Animalia | Chordata | Amphibia | Caudata | Plethodontidae | Desmognathus | null | Desmognathus Baird, 1850 | Desmognathus Baird, 1850 | 3455288901 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-07937.tar | 200M_v1.1/224x224/shards/shard-07937.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_ee83e941-66cb-4dc2-a4ca-a3ead04df0d9.parquet |
c4630ae0-111b-49d4-9d7e-27c68530c966 | Plantae | Tracheophyta | Magnoliopsida | Asterales | Campanulaceae | Lobelia | Lobelia spathopetala | Lobelia spathopetala Diels | Lobelia spathopetala Diels | 4535509363 | gbif | Royal Botanic Gardens, Kew | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-19669.tar | 200M_v1.1/224x224/shards/shard-19669.tar | data/source=gbif/server=d2seqvvyy3b8p2.cloudfront.net/data_6e34f3b8-ea50-4d25-8168-ee76bb28c761.parquet |
563f9115-c40f-43c6-9e10-9ab7775bc76f | Plantae | Tracheophyta | Magnoliopsida | Gentianales | Rubiaceae | Stenaria | Stenaria nigricans | Stenaria nigricans (Lam.) Terrell | Diamondflowers | 3772632740 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-08299.tar | 200M_v1.1/224x224/shards/shard-08299.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_f86d64db-644b-4cc6-b4d9-bb7dc891df1a.parquet |
2cf92b06-847d-4ea7-9652-6cddccb7ba2a | Animalia | Arthropoda | Insecta | Blattodea | Blattidae | Blatta | Blatta orientalis | Blatta orientalis Linnaeus, 1758 | Oriental cockroach | 3760283646 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-01571.tar | 200M_v1.1/224x224/shards/shard-01571.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_458dac16-9eaf-420e-b4b9-0cea11453f1f.parquet |
474d7541-d967-48e3-af7e-7c520ef16421 | Animalia | Arthropoda | Insecta | Hymenoptera | Apidae | Apis | Apis mellifera | Apis mellifera Linnaeus, 1758 | Honey bee | 3385023710 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-01057.tar | 200M_v1.1/224x224/shards/shard-01057.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_869d6076-299f-4c1b-8aa3-016e42326243.parquet |
39859b5c-db7c-4c6e-8acb-2151c22dd8b3 | Plantae | Tracheophyta | Liliopsida | Poales | Poaceae | Dendrocalamus | Dendrocalamus giganteus | Dendrocalamus giganteus Munro | Giant bamboo | 4607952302 | gbif | Royal Botanic Gardens, Kew | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-18394.tar | 200M_v1.1/224x224/shards/shard-18394.tar | data/source=gbif/server=d2seqvvyy3b8p2.cloudfront.net/data_bcd4cd29-6503-43d4-be47-f4b8b1872a05.parquet |
016a7b4a-7d01-4eea-bde7-7f422e7b6b26 | Animalia | Chordata | Mammalia | Lagomorpha | Leporidae | Lepus | Lepus timidus | Lepus timidus Linnaeus, 1758 | skogshare | 2272373729 | gbif | SLU Artdatabanken | HUMAN_OBSERVATION | Citizen Science | shard-12151.tar | 200M_v1.1/224x224/shards/shard-12151.tar | data/source=gbif/server=www.artportalen.se/data_be928648-5af9-4f26-8930-5e6b0f542298.parquet |
46c26e92-b1a3-481e-a9b7-a6f22c1d098d | Plantae | Tracheophyta | Magnoliopsida | Asterales | Asteraceae | Isocoma | Isocoma menziesii | Isocoma menziesii (Hook. & Arn.) G.L.Nesom | Isocoma menziesii (Hook. & Arn.) G.L.Nesom | 2429304032 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-20399.tar | 200M_v1.1/224x224/shards/shard-20399.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_44beb0e1-391a-4b17-82bf-536981a1c3a2.parquet |
a8e06a7f-2d46-4ec1-b859-e2c018547c8f | Animalia | Chordata | Aves | Passeriformes | Laniidae | Lanius | Lanius bucephalus | Lanius bucephalus Temminck & Schlegel, 1845 | Bull-headed shrike | 3985776483 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-18922.tar | 200M_v1.1/224x224/shards/shard-18922.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_ba0eaeb2-26e8-495e-a40f-867e1b068025.parquet |
514e2858-df9e-4e24-9dd4-8a66ed30a8c2 | Fungi | Ascomycota | Sordariomycetes | Meliolales | Armatellaceae | Armatella | Armatella litseae | Armatella litseae (Henn.) Theiss. & Syd. | Armatella litseae (Henn.) Theiss. & Syd. | 3785027788 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-09935.tar | 200M_v1.1/224x224/shards/shard-09935.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_3fbed2ae-f959-4b22-8d39-91c4f82928c1.parquet |
e03599e4-6765-4b80-bfec-2e0952e4d05a | Animalia | Chordata | Aves | Passeriformes | Turdidae | Sialia | Sialia currucoides | Sialia currucoides (Bechstein, 1798) | Mountain bluebird | 4116296272 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-17236.tar | 200M_v1.1/224x224/shards/shard-17236.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_fc0683f3-4ec4-409c-8dfb-f9c313c172d4.parquet |
3187aaba-c25f-4c01-9746-8f505b04ab10 | Plantae | Tracheophyta | Magnoliopsida | Malpighiales | Violaceae | Viola | Viola cucullata | Viola cucullata Aiton | Marsh blue violet | 4080955612 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-14026.tar | 200M_v1.1/224x224/shards/shard-14026.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_80965763-dd65-4936-ba32-767feb7cb020.parquet |
0aaf392b-2580-42a9-8ae7-969ee4583622 | Animalia | Arthropoda | Insecta | Lepidoptera | Noctuidae | Galgula | Galgula partita | Galgula partita Guenée, 1852 | Wedgeling | 3330790752 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-16545.tar | 200M_v1.1/224x224/shards/shard-16545.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_6428ba24-8d01-41b0-bf9e-1d307e9ce791.parquet |
23ee3d6d-69f9-4fdb-9e18-c85e47f4c4e5 | Animalia | Chordata | Aves | Passeriformes | Vireonidae | Vireo | Vireo flavifrons | Vireo flavifrons Vieillot, 1808 | Yellow-throated vireo | 4414116770 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-07597.tar | 200M_v1.1/224x224/shards/shard-07597.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_e51bbb58-badf-4ed0-a1e7-67d3e9afad23.parquet |
c31ac8dd-057f-428f-8c50-97f74ad9f742 | Plantae | Tracheophyta | Magnoliopsida | Solanales | Solanaceae | Solanum | Solanum lycopersicum | Solanum lycopersicum L. | Garden tomato | 2980955668 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-07831.tar | 200M_v1.1/224x224/shards/shard-07831.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_ddc494ab-6f23-44df-b72d-14e36c5492c4.parquet |
844f318b-70eb-4762-a630-e444130692f8 | Plantae | Tracheophyta | Magnoliopsida | Lamiales | Martyniaceae | Proboscidea | Proboscidea louisianica | Proboscidea louisianica (Mill.) Thell. | Elephant tusks | 4516320681 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-10648.tar | 200M_v1.1/224x224/shards/shard-10648.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_0f883dce-b4d1-42f9-9e01-37257d966241.parquet |
e8be41af-1242-45e9-b68b-317598877f3c | Animalia | Arthropoda | Insecta | Hemiptera | Belostomatidae | Lethocerus | Lethocerus distinctifemur | Lethocerus distinctifemur Menke, 1960 | Lethocerus distinctifemur Menke, 1960 | 3860213634 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-19953.tar | 200M_v1.1/224x224/shards/shard-19953.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_7e4e91ff-dbec-4317-9b80-4e0ef92d498d.parquet |
73a37575-7727-49bf-8108-c527dbf59573 | Plantae | Tracheophyta | Magnoliopsida | Asterales | Asteraceae | Smallanthus | Smallanthus riparius | Polymnia riparia Kunth | Polymnia riparia Kunth | 438769193 | gbif | MNHN - Museum national d'Histoire naturelle | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-18172.tar | 200M_v1.1/224x224/shards/shard-18172.tar | data/source=gbif/server=mediaphoto.mnhn.fr/data_8b00aadc-6f9b-4621-a451-a8d63daf9a7f.parquet |
37aebf45-2ade-4ffe-8566-a7b6f9493b39 | Fungi | Basidiomycota | Agaricomycetes | Phallales | Phallaceae | Phallus | Phallus impudicus | Phallus impudicus L. | Common stinkhorn | 3994057719 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-09479.tar | 200M_v1.1/224x224/shards/shard-09479.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_22368b17-9891-4279-b12b-0e08a16cc94e.parquet |
19665034-87f9-48ef-a296-af8e9b007e7b | Animalia | Arthropoda | Insecta | Hemiptera | Berytidae | Berytinus | Berytinus minor | Berytinus minor (Herrich-Schaeffer, 1835) | Stilt bug | 1669279082 | gbif | SLU Artdatabanken | HUMAN_OBSERVATION | Citizen Science | shard-22472.tar | 200M_v1.1/224x224/shards/shard-22472.tar | data/source=gbif/server=www.artportalen.se/data_d074f62a-7f9c-4014-9968-8f04c3379922.parquet |
532bf588-d60d-440d-bb18-d3bb80dc2808 | Plantae | Tracheophyta | Magnoliopsida | Lamiales | Lamiaceae | Pycnanthemum | Pycnanthemum verticillatum | Koellia verticillata (Michx.) Kuntze | Whorled mountain-mint | 1302877818 | gbif | University of Oslo | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-08567.tar | 200M_v1.1/224x224/shards/shard-08567.tar | data/source=gbif/server=www.unimus.no/data_baaeea77-7fa1-4696-a312-5c784272ffe2.parquet |
48484ae9-683d-4e51-a6c4-60da309e3858 | Plantae | Tracheophyta | Liliopsida | Poales | Poaceae | Calamagrostis | Calamagrostis arundinacea | Calamagrostis arundinacea (L.) Roth | Metskastik | 3963549508 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-16081.tar | 200M_v1.1/224x224/shards/shard-16081.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_bff5108f-964a-4fad-981d-94734608d604.parquet |
aecb628d-7e98-474a-a498-944bac9b49b0 | Plantae | Tracheophyta | Liliopsida | Poales | Cyperaceae | Carex | Carex retroflexa | Carex retroflexa Muhl. ex Willd. | Reflexed sedge | 3859033677 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-20765.tar | 200M_v1.1/224x224/shards/shard-20765.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_3392d74e-e329-4bd5-8a79-134e1f931d2f.parquet |
b8730ad4-e013-4283-8685-df97a825dcf6 | Plantae | Tracheophyta | Liliopsida | Asparagales | Amaryllidaceae | Allium | null | Allium L. | Allium L. | 465160671 | gbif | MNHN - Museum national d'Histoire naturelle | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-03547.tar | 200M_v1.1/224x224/shards/shard-03547.tar | data/source=gbif/server=mediaphoto.mnhn.fr/data_253b8ead-d73d-4f5c-a4cb-de2189c15f05.parquet |
89bce6ec-b4a8-4df4-876a-945b863ce1b8 | Animalia | Arthropoda | Insecta | Odonata | Libellulidae | Macrodiplax | Macrodiplax cora | Macrodiplax cora (Kaup, 1867) | Coastal glider | 3947161675 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-03856.tar | 200M_v1.1/224x224/shards/shard-03856.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_0695c5b0-7db6-405e-9c69-4268722d5b8d.parquet |
152dc54f-ab58-4782-b19e-f7bf17e5d62c | Animalia | Arthropoda | Insecta | Lepidoptera | Lycaenidae | Lycaena | Lycaena virgaureae | Lycaena virgaureae (Linnaeus, 1758) | vitfläckig guldvinge | 2295173851 | gbif | SLU Artdatabanken | HUMAN_OBSERVATION | Citizen Science | shard-20414.tar | 200M_v1.1/224x224/shards/shard-20414.tar | data/source=gbif/server=www.artportalen.se/data_c953a043-d1b1-4f8b-903b-5716164b173c.parquet |
63c4aa40-a794-4d08-beef-30ae0a116b43 | Plantae | Tracheophyta | Magnoliopsida | Asterales | Asteraceae | Eurybia | Eurybia macrophylla | Eurybia macrophylla (L.) Cass. | Big-leaved aster | 2366109894 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-01906.tar | 200M_v1.1/224x224/shards/shard-01906.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_ef146f5c-6330-42c0-9c34-fa6f5fed9079.parquet |
43d71c20-01ed-4ca9-aad2-fa972357c60a | Animalia | Arthropoda | Insecta | Lepidoptera | Geometridae | Odontopera | Odontopera bidentata | Odontopera bidentata (Clerck, 1759) | Scalloped hazel | 1826329516 | gbif | Natural History Museum | PRESERVED_SPECIMEN | Museum Specimen: Insect | shard-17340.tar | 200M_v1.1/224x224/shards/shard-17340.tar | data/source=gbif/server=data.nhm.ac.uk/data_e3ea5545-bf00-49bb-801e-ac03c06d7a8d.parquet |
0e5c90ac-12b0-4363-962b-73913613583e | Animalia | Chordata | Aves | Passeriformes | Corvidae | Coloeus | Coloeus monedula | Corvus monedula Linnaeus, 1758 | Western jackdaw | 4407430976 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-21869.tar | 200M_v1.1/224x224/shards/shard-21869.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_eca47fd5-b237-4cc3-a51f-b1f126f11130.parquet |
aef313d7-e001-4971-ad24-bca426194038 | Plantae | Tracheophyta | Magnoliopsida | Ranunculales | Ranunculaceae | Coptis | Coptis aspleniifolia | Coptis aspleniifolia Salisb. | Fern-leaved goldthread | 2864744559 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-00710.tar | 200M_v1.1/224x224/shards/shard-00710.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_a0534ce2-995b-47f4-b233-19c150641685.parquet |
58318ff1-9a0b-4e7e-ba73-666fd2b1e761 | Animalia | Arthropoda | Insecta | Hymenoptera | Apidae | Bombus | Bombus impatiens | Bombus impatiens Cresson, 1863 | Common eastern bumble bee | 4414357304 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-02822.tar | 200M_v1.1/224x224/shards/shard-02822.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_3227070f-ce9a-46ab-9aab-cf57412c7b73.parquet |
9cf6a9c9-9c60-4d07-b182-dd8a02c6c030 | Plantae | Tracheophyta | Liliopsida | Poales | Poaceae | Eriochloa | Eriochloa contracta | Eriochloa contracta Hitchc. | Prairie cup grass | 4010603421 | gbif | The University of Vermont Pringle Herbarium | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-13975.tar | 200M_v1.1/224x224/shards/shard-13975.tar | data/source=gbif/server=nansh.org/data_7cbf0bac-d49e-4c48-b8aa-43e3e43a4644.parquet |
1b46ca84-6fb7-47ec-9d7a-d0d30dfb74c0 | Plantae | Tracheophyta | Liliopsida | Poales | Cyperaceae | Scirpus | Scirpus atrovirens | Scirpus atrovirens Willd. | Black bulrush | 3385049460 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-21593.tar | 200M_v1.1/224x224/shards/shard-21593.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_bcddbf91-240d-49de-9a32-859e4ab26958.parquet |
35b5a094-eabb-49ea-bfd9-5b9af9308631 | Plantae | Tracheophyta | Liliopsida | Poales | Bromeliaceae | Lemeltonia | Lemeltonia monadelpha | Tillandsia monadelpha (É.Morren) Baker | Tillandsia monadelpha (É.Morren) Baker | 4031639459 | gbif | Missouri Botanical Garden | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-22363.tar | 200M_v1.1/224x224/shards/shard-22363.tar | data/source=gbif/server=images.mobot.org/data_d47ff153-50a4-4713-a2f8-3b845745f0a2.parquet |
b95e20c9-a52d-4792-93be-758653f64630 | Plantae | Tracheophyta | Magnoliopsida | Ericales | Ericaceae | Vaccinium | Vaccinium corymbosum | Vaccinium corymbosum L. | Blueberry | 607583140 | gbif | MNHN - Museum national d'Histoire naturelle | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-13903.tar | 200M_v1.1/224x224/shards/shard-13903.tar | data/source=gbif/server=mediaphoto.mnhn.fr/data_2496b92b-baf9-4264-8eb5-8e823bda2012.parquet |
7602fa9b-9f17-4cc0-bd8d-1bcc22bfb2ac | Plantae | Tracheophyta | Magnoliopsida | Dipsacales | Viburnaceae | Viburnum | Viburnum tinus | Viburnum tinus L. | Laurustinus | 3949108714 | gbif | Pl@ntNet | HUMAN_OBSERVATION | Citizen Science | shard-15142.tar | 200M_v1.1/224x224/shards/shard-15142.tar | data/source=gbif/server=bs.plantnet.org/data_605b9295-c489-46b8-983b-b47e58d48f4b.parquet |
31965940-fc86-4ea1-a039-ca7cea0936c5 | Plantae | Tracheophyta | Magnoliopsida | Boraginales | Heliotropiaceae | Heliotropium | Heliotropium curassavicum | Heliotropium curassavicum L. | Seaside heliotrope | 3860807354 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-09803.tar | 200M_v1.1/224x224/shards/shard-09803.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_436dba5d-4b96-47af-84bc-c38855a1bb24.parquet |
072d1e66-b91d-42e9-9a90-08b15c6972a8 | Animalia | Chordata | Aves | Passeriformes | Passerellidae | Melospiza | Melospiza melodia | Melospiza melodia (A.Wilson, 1810) | Song sparrow | 3302322051 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-03660.tar | 200M_v1.1/224x224/shards/shard-03660.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_d7f223f2-3c52-4224-8204-106de43dbb76.parquet |
7762a014-2212-4943-838d-17bbffb72cf0 | Animalia | Arthropoda | Insecta | Lepidoptera | Nymphalidae | Pararge | Lasiommata megera | Lasiommata megera (Linnaeus, 1767) | Lasiommata megera (Linnaeus, 1767) | 3888892878 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-14841.tar | 200M_v1.1/224x224/shards/shard-14841.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_a5e9a529-65ca-48a6-9810-79ea8b0fba10.parquet |
e5ad1c55-eece-4b6b-b177-24f09981e5c2 | Plantae | Tracheophyta | Magnoliopsida | Caryophyllales | Amaranthaceae | Pupalia | Pupalia lappacea | Pupalia lappacea (L.) A.Juss. | Pupalia lappacea (L.) A.Juss. | 1839885490 | gbif | Meise Botanic Garden | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-07841.tar | 200M_v1.1/224x224/shards/shard-07841.tar | data/source=gbif/server=oxalis.br.fgov.be/data_fac50795-daa6-43d4-91fd-0b2e468b5b97.parquet |
ebca8c73-214b-4aab-af26-9c51a26c4306 | Plantae | Tracheophyta | Magnoliopsida | Geraniales | Geraniaceae | Pelargonium | Pelargonium pulverulentum | Pelargonium pulverulentum Colvill ex Sweet | Powdered-leaf pelargonium | 4465655378 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-12172.tar | 200M_v1.1/224x224/shards/shard-12172.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_066af0f1-140f-49d0-b82e-685bd6e3672d.parquet |
064dfa31-9934-47b8-b592-53086124904c | Animalia | Chordata | Aves | Passeriformes | Turdidae | Turdus | Turdus merula | Turdus merula Linnaeus, 1758 | Common blackbird | 2423113665 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-18976.tar | 200M_v1.1/224x224/shards/shard-18976.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_9975fda3-a995-4743-b376-8e1afaf4d2e3.parquet |
c6a9e279-74f1-4bd0-984b-8dcbaa409525 | Animalia | Arthropoda | Insecta | Lepidoptera | Nymphalidae | Coenonympha | Coenonympha leander | Coenonympha leander leander | Russian heath | 2980807182 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-21719.tar | 200M_v1.1/224x224/shards/shard-21719.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_8f223e96-3a5c-456d-82f7-281a1b703c53.parquet |
a4ad5a63-6480-4f34-a7e3-f88a7b86238e | Plantae | Tracheophyta | Magnoliopsida | Lamiales | Plantaginaceae | Linaria | Linaria vulgaris | Linaria vulgaris Mill. | Butter and eggs | 2856618290 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-21884.tar | 200M_v1.1/224x224/shards/shard-21884.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_f38c3012-1062-41be-acf5-26640516ff9f.parquet |
58dc0063-821a-4387-bb93-12251c0eb932 | Plantae | Tracheophyta | Lycopodiopsida | Selaginellales | Selaginellaceae | Selaginella | Selaginella apoda | Selaginella apoda (L.) C.Morren | Creeping spikemoss | 3709848346 | gbif | University of Georgia Herbarium [GA] | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-13665.tar | 200M_v1.1/224x224/shards/shard-13665.tar | data/source=gbif/server=sernecportal.org/data_7356894f-7c90-4660-b0e9-7c1e8d6944b7.parquet |
4610b00f-c9d1-485c-8b71-4f5c7626462a | incertae sedis | null | null | null | null | null | null | incertae sedis | incertae sedis | 4102391769 | gbif | Botanical Research Institute of Texas | PRESERVED_SPECIMEN | Museum Specimen: Uncategorized | shard-17972.tar | 200M_v1.1/224x224/shards/shard-17972.tar | data/source=gbif/server=sernecportal.org/data_604c30a1-12b2-4963-8761-45010ba85a6c.parquet |
c3ad916c-ce56-4a65-b563-e1c1239e8e21 | Plantae | Tracheophyta | Magnoliopsida | Brassicales | Brassicaceae | Cardamine | Cardamine diphylla | Cardamine diphylla (Michx.) A.W.Wood | Broad-leaved toothwort | 3915274486 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-03019.tar | 200M_v1.1/224x224/shards/shard-03019.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_29864405-ae18-4b16-9dcb-222a6895dbd9.parquet |
48de8fd4-4b44-4b45-9b29-a67011c53cff | Plantae | Tracheophyta | Magnoliopsida | Ericales | Ericaceae | Agiortia | Agiortia pedicellata | Agiortia pedicellata (C.T.White) Quinn | Agiortia pedicellata (C.T.White) Quinn | 4512159780 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-22879.tar | 200M_v1.1/224x224/shards/shard-22879.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_cadc14db-1a0a-495c-8e61-6c6f5dabd460.parquet |
cafa7380-ec35-44db-93fc-d8b2bdd03cc3 | Animalia | Arthropoda | Insecta | Hymenoptera | Vespidae | Dolichovespula | Dolichovespula maculata | Dolichovespula maculata (Linnaeus, 1763) | Bald-faced hornet | 2563467970 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-16499.tar | 200M_v1.1/224x224/shards/shard-16499.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_234df9a3-2c6e-4acc-bdda-bd8be3522982.parquet |
30ef08ad-ead4-4d17-9034-7d004e633f09 | Plantae | Tracheophyta | Liliopsida | Poales | Poaceae | Echinochloa | Echinochloa crus-galli | Echinochloa crus-galli (L.) P.Beauv. | Cockspur | 3925156856 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-17888.tar | 200M_v1.1/224x224/shards/shard-17888.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_bfbd9cde-2902-47e8-b2f7-1f6ae818d253.parquet |
cc0bc475-6373-443c-baf9-19d869ba3541 | Plantae | Tracheophyta | Pinopsida | Pinales | Cupressaceae | Taxodium | Taxodium distichum | Taxodium distichum (L.) Rich. | Bald cypress | 4116219141 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-02878.tar | 200M_v1.1/224x224/shards/shard-02878.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_38b09bbd-82e2-43ae-bd37-45fd9d00d2fb.parquet |
b4a1d156-d977-446f-9d39-09947ffdaa18 | Fungi | Basidiomycota | Agaricomycetes | Cantharellales | Hydnaceae | Craterellus | Craterellus tubaeformis | Craterellus tubaeformis (Fr.) Quél. | Yellowfoot | 2897790387 | gbif | The Norwegian Biodiversity Information Centre (NBIC) | HUMAN_OBSERVATION | Citizen Science | shard-12311.tar | 200M_v1.1/224x224/shards/shard-12311.tar | data/source=gbif/server=www.artsobservasjoner.no/data_1ab44651-5b34-4a6a-9328-bf27bdda3789.parquet |
7955afba-9098-4238-8bbd-5088e72a283e | Animalia | Arthropoda | Insecta | Lepidoptera | Saturniidae | Actias | Actias luna | Actias luna Linnaeus, 1758 | Luna moth | 2859918777 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-00474.tar | 200M_v1.1/224x224/shards/shard-00474.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_54d390be-a41e-44ad-b3a4-4956ab076b36.parquet |
00c77337-b7c6-4073-91b4-325e20f25253 | Animalia | Arthropoda | Insecta | Lepidoptera | Nymphalidae | Vanessa | Vanessa atalanta | Vanessa atalanta (Linnaeus, 1758) | Red admiral | 4162250735 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-08101.tar | 200M_v1.1/224x224/shards/shard-08101.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_8d5d384e-9c2d-41f3-a311-b7106ea8638c.parquet |
cc3e8cd0-b993-4fdf-ae35-27880edf1597 | Animalia | Chordata | Squamata | null | Colubridae | Nerodia | Nerodia sipedon | Nerodia sipedon sipedon | Northern water snake | 2868371673 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-09864.tar | 200M_v1.1/224x224/shards/shard-09864.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_a86727c7-1f2e-4bb0-b041-49b26fdfa08a.parquet |
a0a1ee3e-8d3d-4fe7-8059-48a07950bf66 | Plantae | Tracheophyta | Liliopsida | Poales | Poaceae | Milium | Milium effusum | Milium effusum L. | Wood millet | 1701926319 | gbif | University of Oslo | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-06471.tar | 200M_v1.1/224x224/shards/shard-06471.tar | data/source=gbif/server=www.unimus.no/data_8f7671b8-fc18-4c79-8733-90a01b95c7b1.parquet |
bd52abab-f57a-4767-a6f4-4e919ae372a2 | Animalia | Chordata | Aves | Pelecaniformes | Ardeidae | Ardea | Ardea cinerea | Ardea cinerea Linnaeus, 1758 | Grey heron | 1831178662 | gbif | iNaturalist.org | HUMAN_OBSERVATION | Citizen Science | shard-16679.tar | 200M_v1.1/224x224/shards/shard-16679.tar | data/source=gbif/server=inaturalist-open-data.s3.amazonaws.com/data_43034519-8ccf-4e15-8ece-ec4dfe3cc5ca.parquet |
d32c254a-db76-4204-961d-42e72cf90fa0 | Plantae | Tracheophyta | Magnoliopsida | Asterales | Campanulaceae | Campanula | Campanula persicifolia | Campanula persicifolia L. | Peach-leaved bellflower | 2516341518 | gbif | Naturalis Biodiversity Center | PRESERVED_SPECIMEN | Museum Specimen: Plant | shard-14726.tar | 200M_v1.1/224x224/shards/shard-14726.tar | data/source=gbif/server=medialib.naturalis.nl/data_c929ae48-3e14-4aa9-8dfd-bfa458cf21db.parquet |
Dataset Card for TreeOfLife-200M
With nearly 214 million images representing 952,257 taxa across the tree of life, TreeOfLife-200M is the largest and most diverse public ML-ready dataset for computer vision models in biology at release. This dataset combines images and metadata from four core biodiversity data providers: Global Biodiversity Information Facility (GBIF), Encyclopedia of Life (EOL), BIOSCAN-5M, and FathomNet to more than double the number of unique taxa covered by TreeOfLife-10M, adding 50 million more images than BioTrove (and nearly triple the unique taxa). TreeOfLife-200M also increases image context diversity with museum specimen, camera trap, and citizen science images well-represented (see Image Types). Our rigorous curation process ensures each image has the most specific taxonomic label possible and that the overall dataset provides a well-rounded foundation for training BioCLIP 2 and future biology foundation models.
Dataset Details
Supported Tasks and Leaderboards
Image Classification, Zero-shot and few-shot Classification.
Dataset Contents
/dataset/
catalog.parquet
metadata/
Darwin-finches.csv
eol_metadata/
media_manifest.csv
taxon.tab
fathom_metadata.csv
provenance.parquet # For full Dataset
resolved_taxa/ # product of TaxonoPy
source=bioscan/
source=eol/
source=fathomnet/
source=gbif/
To avoid republishing existing datasets or interfering with original data source providers' ability to track use of their data, we provide all metadata here with step-by-step reproduction instructions in the GitHub repository to download the images and recreate the proper webdataset structure. This process will produce a collection of files named shard-######.tar
in a train
folder with which to work.
Inside each shard is a collection of images (named <uuid>.jpg
), for which each has the following files:
<uuid>.com.txt
<uuid>.common_name.txt
<uuid>.jpg
<uuid>.sci.txt
<uuid>.sci_com.txt
<uuid>.scientific_name.txt
<uuid>.taxon.txt
<uuid>.taxonTag.txt
<uuid>.taxonTag_com.txt
<uuid>.taxon_com.txt
<uuid>.taxonomic_name.txt
Data Instances
Each image in this dataset is matched to the 7-rank Linnean taxonomy and common name of the subject of the image (where available). Examples of these text types is provided below. 89% (190,988,120) of the images have full taxonomic labels (for more context, see discussion on labeling challenges in biodiversity data under Considerations for Use). In addition to the biodiversity introduced (952,257 unique taxa), these images also span a variety of settings (or "images types"), the three main categories we highlight being museum specimen, camera trap, and citizen science images. Counts for these and more specific museum specimen subcategories (as used in processing) are provide in a table below.
Text Types
Text Type | Example |
---|---|
Common name | Narrow-leaved meadow-grass |
Scientific name | Poa angustifolia |
Taxonomic label | Plantae Tracheophyta Liliopsida Poales Poaceae Poa angustifolia |
Image Types (GBIF only)
Image Type | Number of Images |
---|---|
Camera-trap | 617.8K |
Citizen Science | 151M |
Museum Specimen: Fungi | 599.5K |
Museum Specimen: Insect | 7.9M |
Museum Specimen: Invertebrate Zoology | 1.7M |
Museum Specimen: Microbiology | 38.7K |
Museum Specimen: Plant | 39.7M |
Museum Specimen: Uncategorized | 1M |
Museum Specimen: Vertebrate Zoology - Amphibians | 36.2K |
Museum Specimen: Vertebrate Zoology - Birds | 435.3K |
Museum Specimen: Vertebrate Zoology - Fishes | 199.7K |
Museum Specimen: Vertebrate Zoology - Mammals | 129.1K |
Museum Specimen: Vertebrate Zoology - Others | 137K |
Data Fields
catalog.parquet
uuid
: unique identifier for the image in this dataset, created at time of download.kingdom
: kingdom to which the subject of the image belongs (Animalia
,Plantae
,Fungi
,Chromista
,Protozoa
,Bacteria
,Viruses
,Archaea
, and less than 1% unresolved cases, e.g.,Metazoa
andincertae sedis
).phylum
: phylum to which the subject of the image belongs.class
: class to which the subject of the image belongs.order
: order to which the subject of the image belongs.family
: family to which the subject of the image belongs.genus
: genus to which the subject of the image belongs.species
: species to which the subject of the image belongs.scientific_name
:<Genus> <species>
of the subject of the image, or most specific taxonomic rank available.common
: vernacular name associated with the subject of the image where available. Otherwise, this is either thescientific_name
or whatever subset of the taxonomic hierarchy is available (eg.,<Kingdom> <Phylum> <Class> <Order>
or<Kingdom> <Phylum> <Class> <Order> <Family>
). All images have a non-null entry for this column.source_id
: unique identifier for the image used by the source.- Note: for GBIF, this is
gbifID
which is unique to the occurrence containing the image. For EOL, this is<EOL Content ID>_<EOL Page ID>
, the first of which is not a persistent identifier.
- Note: for GBIF, this is
data_source
: source from which the record was obtained (gbif
,eol
,bioscan
, orfathomnet
).publisher
: the organization or entity that published the data (exclusive to GBIF records).basisOfRecord
: basis of the record (e.g.,PRESERVED_SPECIMEN
,HUMAN_OBSERVATION
,MACHINE_OBSERVATION
; exclusive to GBIF records).img_type
: the type of the associated image or its subject (e.g.,Museum Specimen: Fungi
,Citizen Science
,Camera-trap
), as defined by our processing (exclusive to GBIF records; EOL, BIOSCAN, and FathomNet images are all classified as `Unidentified).shard_filename
: name of shard containing the image.shard_file_path
: filepath of the shard containing the image.- ex:
200M_v1.1/224x224/shards/shard-00123.tar
- ex:
base_dataset_file_path
: filepath of the parquet file in the dataset containing the image.- ex:
data/source=gbif/server=observation.org/data_7c3169bf-9670-4c03-86e7-c6d31436bb33.parquet
- ex:
provenance.parquet: Provenance metadata for the full dataset.
uuid
: unique identifier for the image in this dataset, created at time of download.source_id
: unique identifier for the image used by the source.- Note: for GBIF, this is
gbifID
which is unique to the occurrence containing the image. For EOL, this is<EOL Content ID>_<EOL Page ID>
, the first of which is not a persistent identifier.
- Note: for GBIF, this is
data_source
: source from which the record was obtained (gbif
,eol
,bioscan
, orfathomnet
).source_url
: URL from which image was downloaded.license_name
: name of license attached to the image (eg.,cc-by
).copyright_owner
: copyright holder for the image, filled withnot provided
if no copyright owner was provided.license_link
: URL to the listed license, left null in the case thatlicense_name
isNo known copyright restrictions
.title
: title provided for the image, filled withnot provided
if no title was pro
Darwin-finches.csv: File for Darwin's finches embedding space evaluation completed in paper. Images are a represenative subset of the 18 species known as "Darwin's Finches" sampled from TreeOfLice-200M for this evaluation. Common names are from Avibase.
uuid
: unique identifier for the image in this dataset, links to other TreeOfLife-200M metadata.scientific_name
: scientific name of the species.filepath
:<scientific_name>/<uuid>.jpg
the expected filepath to the images when calling them from a directory with the images organized in subfolders determined by the scientific name of the bird in the image.common_name
: common name used by Avibase for the species.group
: the "group" to which the bird belongs ('tree finches', 'warbler finches', 'ground finches', 'cactus finches', 'vampire finch', 'Cocos finch', or 'vegetarian finch'), as determined by name and the paper, Lamichhaney, S., Berglund, J., Almén, M. et al. Evolution of Darwin’s finches and their beaks revealed by genome sequencing. Nature 518, 371–375 (2015). https://doi.org/10.1038/nature14181.group
image counts:group name number of images ground finches 180 tree finches 145 cactus finches 133 warbler finches 100 Cocos finch 50 vegetarian finch 50 vampire finch 19
EOL-specific Files
media_manifest.csv: File with license, source, and copyright holder associated to each image from EOL listed in catalog.parquet
and provenance.parquet
; use <EOL Content ID>_<EOL Page ID>
to match on source_id
for provenance.parquet
. Remaining columns are
EOL content ID
: unique identifier within EOL database for images sourced from EOL. Note that EOL content IDs are not stable.EOL page ID
: identifier of page from which images from EOL are sourced. Note that an image's association to a particular page ID may change with updates to the EOL (or image provider's) hierarchy. However, EOL taxon page IDs are stable.Medium Source URL
: URL pointing to source of image.EOL Full-Size Copy URL
: URL to access the full-sized image; this is the URL from which the image was downloaded for this dataset (see Initial Data Collection and Normalization for more information on this process).License Name
: name of license attached to the image (e.g.,cc-by
).Copyright Owner
: copyright holder for the image, filled withnot provided
if no copyright owner was provided.
taxon.tab: Tab-delimited file with taxonomic information for EOL images based on EOL page IDs.
taxonID
: unique identifier for the file.source
: often<source>:<id>
where the source corresponds to the domain of thefurtherInformationURL
. The ID likely corresponds to an ID at the source.furtherInformationURL
: URL with more information on the indicated taxon.acceptedNameUsageID
:taxonID
for the name accepted to represent this entry. Less than a third of these are non-nullparentNameUsageID
:taxonID
of taxonomic rank above the indicatedtaxonRank
in the hierarchy (eg., thetaxonID
of the genusAtadinus
for theAtadinus fallax (Boiss.) Hauenschild
entry).scientificName
: scientific name associated with the EOL page (<canonicalName> <authority>
, authority as available).taxonRank
: lowest rank of the taxonomic tree indicated (eg.,genus
orspecies
), occasionally not indicated, even for accepted names.taxonomicStatus
: whether the name is accepted by EOL or not (accepted
ornot accepted
, correspond to existence of non-nulleolID
oracceptedNameUsageID
entry, respectively).datasetID
: generally corresponds to the source identified insource
column.canonicalName
: the name(s) associate with thetaxonRank
(eg.,<Genus> <species>
for species).authority
: usually name of person who assigned the name, with the year as available.eolID
: the EOL page ID (only non-null whentaxonomicStatus
is accepted by EOL).Landmark
: numeric values, meaning unknown, mostly null.higherClassification
: labeling in the EOL Dynamic Hierarchy above thetaxonRank
(eg.,Life|Cellular Organisms|Eukaryota|Opisthokonta|Metazoa|Bilateria|Protostomia|Ecdysozoa|Arthropoda|Pancrustacea|Hexapoda|Insecta|Pterygota|Neoptera|Endopterygota|Coleoptera|Adephaga|Carabidae|Paussus
).
FathomNet Specific File
fathom_metadata.csv: Metadata file with FathomNet images identifiers and associated bounding boxes. This is required to fetch FathomNet images since there are multiple bounding boxes used from some images to generate final TreeOfLife-200M images.
uuid
: unique identifier to match tocatalog
andprovenance
parquet files.x
,y
: together these columns give the reference coordinate from which to construct the bounding boxes.width
: width in pixels of bounding box the image came from.height
: height in pixels of bounding box the image came from. This file is required along withprovenance.parquet
to fetch all the FathomNet images since some are pulled from bounding boxes around different creatures in the same base image.
Data Splits
This entire dataset was used for training the model. We used 11 biologically-relevant datasets for various species classification tests of the model trained on this dataset; they are described (briefly) and linked to below.
Test Sets
BioCLIP 2 was tested on the same 10 biologically-relevant benchmarks as BioCLIP, though we used NABirds in place of Birds 525, since the latter is no longer available online. We also curated IDLE-OO Camera Traps.
- NABirds: 48K images of the 400 most common North American birds (based on observation counts), with at least 100 images per species. Includes age and sex annotations that we used for evaluation.
- Meta-Album: Specifically, we used the Plankton, Insects, Insects 2, PlantNet, Fungi, PlantVillage, and Medicinal Leaf datasets.
- Rare Species: Balanced benchmark dataset with 400 species (30 images per species) listed under 5 IUCN Red List categories (Near Threatened, Vulnerable, Endangered, Critically Endangered, and Extinct in the Wild).
- IDLE-OO Camera Traps: A new benchmark we curated from a combination of 5 different LILA BC camera trap datasets with image-level labels. These were filtered to contain only images with a single species of animal in frame.
Additional hierarchical structure and embedding space evaluation was done using images of Darwin's Finches sourced from the training data (in metadata/Darwin-finches.csv
). These species are not evenly represented in the dataset, so 12 of them have 50 images each, but the remaining six species (Geospiza propinqua, Geospiza acutirostris, Camarhynchus psittacula, Geospiza septentrionalis, Camarhynchus pauper, Camarhynchus heliobates) have between 8 and 33 representative images (listed in decreasing order).
Other non-species classification tasks were also used for testing, and are described in the BioCLIP 2 model card and our paper.
Dataset Creation
Curation Rationale
TreeOfLife-200M was curated for the purpose of training a biological foundation model. In particular, we aimed to increase the both the biodiversity of available training data (i.e., from that available in TreeOfLife-10M) and the raw number of images available (i.e., from that of BioTrove). We also performed extensive data curation beyond that used for either of these training datasets: aligning taxonomic labels, removing images of labels or folders associated to specimens, removing noisy citizen science and camera trap images, and ensuring no identifiable humans are in the images (more info below).
We have expanded coverage across the 2.14M described species estimated by The International Union for Conservation of Nature (IUCN) as of March 2025, with particularly strong representation of threatened species (77.1% of species across threatened categories are represented in TreeOfLife-200M). This coverage and the implications are discussed in greater detail in our paper.
Source Data
TreeOfLife-200M is composed of images from the following four core data providers:
- Global Biodiversity Information Facility (GBIF), which is a major biological data aggregator cataloging biodiversity data from citizen science sources (e.g., iNaturalist), museum collections (e.g., from the Smithsonian Institution, Museum national d'Histoire naturelle), and camera trap collections (e.g., from the Research Institute for Nature and Forest (INBO)).
- GBIF provides a DOI for the occurrence snapshot we downloaded (GBIF occurrence 2024-05-01 snapshot with filter
"occurrenceStatus": "PRESENT"
(DOI: https://doi.org/10.15468/dl.bfv433)). - This manifest was further filtered for only
Still Images
, those withgbifID
andidentifier
, and those not labeled as images of text documents prior to download.- Note: there is only one category (
"basisOfRecord": "MATERIAL_CITATION"
) that describes images of textual documents (these are a particular type of document that describes species).
- Note: there is only one category (
- Further filtereing and processing steps are described below.
- Encyclopedia of Life (EOL): Another large biological data aggregator (greatest source of biodiversity in TreeOfLife-10M).
- EOL does not have a versioned release like GBIF, so recreating this dataset requires use of
metadata/eol_metadata/media_manifest.csv
andmetadata/eol_metadata/taxon.tab
(this is just if one wants to reproduce our process, the providedcatalog
andprovenance
parquets are sufficient to reproduce a copy of the dataset).- Media manifest was downloaded from "image list URL: https://eol.org/data/media_manifest.tgz" (at image list). Taxonomy (
taxon.tab
) from "EOL Dynamic Hierarchy Active Version URL: https://editors.eol.org/uploaded_resources/00a/db4/dh21.zip" (at dataset).
- Media manifest was downloaded from "image list URL: https://eol.org/data/media_manifest.tgz" (at image list). Taxonomy (
- Images used for the Rare Species dataset were removed from this collection (by MD5) to avoid data leakage.
- Further filtereing and processing steps are described below.
- BIOSCAN-5M: Collection of primarily insect specimen images, hand-labeled by experts. Other Arthropoda classes account for 2% of the 5M images. 93% of the images in the dataset are not labeled to the species level.
- This dataset was ready to use, and we followed access instructions in their repository (specifically downloading through the Google Drive link).
- The inclusion of this data just required aligning the taxon labels with those of the other datasets (following the Annotation Process, described below).
- FathomNet: Collection of expert-annotated images of undersea creatures; this dataset focuses on a habitat instead of a clade.
- This dataset required fetching image metadata through their API to generate a manifest, then a second pass to fetch bounding boxes for each image.
- From these, "concepts" were extracted and GNVerifier was utilized to obtain the relevant taxonomic information.
- Extracted taxonomic information required alignment (as described in Annotation Process, below).
- Focal species were retrieved from each image following download using distributed-downloader.
- Images with multiple focal species had each extracted into its own image utilizing the bounding box annotations, hence the inclusion of a
fathom_metadata
CSV to fetch all images. The process is described, with specific instructions, in TreeOfLife-toolbox/docs/FathomNet_download_README.
- Images with multiple focal species had each extracted into its own image utilizing the bounding box annotations, hence the inclusion of a
Both BIOSCAN-5M and FathomNet were included to help improve coverage of under-represented and highly diverse branches of the tree of life (Insecta is one of the most diverse classes and creatures that dwell in the ocean are much less commonly represented). The total number of dataset-wide taxonomic hierarchies that are uniquely contributed by each core data provider is provided below, with their total number of images contributed to exemplify this point.
Provider | Unique Taxa | Images |
---|---|---|
GBIF | 586,898 | 203.5M |
EOL | 48,748 | 5.3M |
BIOSCAN-5M | 2,900 | 5.2M |
FathomNet | 251 | 37.9K |
Data Curation and Processing
During download (with distributed-downloader), each image's size is checked: first that it is sufficiently large (224 pixels or more on shortest side) and excluded if not, and then the image is resized, if necessary, so that its largest side does not exceed 720 pixels. A hash of both the original and the resized image is recorded, and the hash of the original image is compared across the dataset to avoid introducing duplicate images. The metadata is still recorded, so that no information is lost (images may be uploaded to one site with more or less information than to another).
The taxonmic alignment process, which was applied to all source data, is described below in Annotations. The remaining processing was focused on (1) ensuring image quality and (2) eliminating duplication and data leakage, and is described below.
1. Ensuring Image Quality
We noted the varied image types included in the GBIF snapshot, above. The three main types (musuem specimen, camera trap, and citizen science images) each require special filtering processes to avoid introducing noisy data.
Musuem specimen collections are often photographed with both specimens and their associated text documents (e.g., labels, folders, tags) under the same occurrence. All images under a single occurrence share metadata, there is no distinction for the subject of the image. These images of text were filtered through a nearest-centroid classifier spanning 25 fine-grained subtypes; 11 collection areas (Fungi, Insect, Invertebrate Zoology, Microbiology, Plant, Uncategorized, and five classes of Vertebrate Zoology: Amphibians, Birds, Fishes, Mammals, Others) inspired by the Smithsonian Institution's collection categories, each further subdivided to classes such as preserved or fossil specimen, as labed by GBIF basisOfRecord
. We manually curate an 8.5K set of examples on which to fit the classifier, which predicts a subtype for all museum images. All non-organismal images are then removed.
Camera trap occurrences are first filtered to only those with 15 images or less. MegaDetector is then applied to each occurrence to distinguish those with animals in them from "empty" frames. We remove these to avoid labeling a creature's habitat as the creature, particularly since we are training a foundation model for the full tree of life, meaning that plants are of interest in their own right and should not be mislabeled as animals.
- Context: Some occurrences include large-volume camera-trap sequences, with up to 10,000 images. These occurrences have a single taxonomic label applied across all images, though there are different taxa (e.g, the first few frames had a duck, while later images have a swan, another a goose, but the label for all is a duck). In these cases, Megadetector often misclassifies empty frames or detects animals that do not match the intended taxa, leading to false positives. To reduce the risk of introducing such noise while still capturing relevant biodiversity, we filter the dataset to include only occurrences with 15 images or fewer.
Finally, images within citizen science occurrences are tested for similarity, and the mean pair-wise BioCLIP embedding distance is used to determine whether they fall into one of three categories: (1) those that are overly distinct (this can happen when images of different species are uploaded to the same observation), (2) those that exhibit "expected" variation, and (3) those that are exceedingly similar (this can occur when images from a single camera trap are uploaded to one observation). The images in (1) are removed (bottom 5th percentile), those in (2) are retained, and those in (3) are run through the camera trap processing described above.
We run MTCNN on all images from GBIF and EOL to detect and remove images containing identifiable human faces. BIOSCAN-5M and FathomNet Database do not have images with human faces requiring filtering.
2. Eliminating Duplication and Data Leakage
As noted above, MD5 hashes are taken of every image on download. This are highly sensitive, in that variation by a single pixel will result in a different hash between two images. Thus, these are used for an initial filter across all images to avoid duplication and the introduction of test set images (e.g., those from Rare Species that were sourced from EOL) into the training data. The next step is to check for test images by metadata; however, this is not always viable, as existing benchmarks do not always retain the connection to their orignal source data in a manner allowing this. We thus take perceptual PDQ hashes of every test image and all images from GBIF and EOL (with Medium Source URL
from Flickr--these methods are not effective on museum specimen images), removing those with distance less than 10 from the training data.
The code for all of these processing steps, along with further details, is provided in TreeOfLife-toolbox.
Annotations
We standardized the taxonomic labels provided by the four core data providers to conform to a uniform 7-rank Linnean structure.
Kingdom Counts
Kingdom | Number of Images |
---|---|
Animalia | 102591559 |
Plantae | 101881537 |
Fungi | 7556801 |
Chromista | 530234 |
Protozoa | 184809 |
Bacteria | 59109 |
Viruses | 8587 |
Archaea | 70 |
Annotation process
Taxonomic labels (kingdom, phylum, etc.) were standardized across the various data sources using the TaxonoPy
package that we designed (in consultation with taxonomists) for this purpose. The TaxonoPy
algorithm works to match each unique taxonomic string to the GBIF Backbone, Catalogue of Life, and OpenTree hierarchies (in that order). See TaxonoPy
for more details on this process.
Who are the annotators?
TBA
Personal and Sensitive Information
None: These images come from existing, public biodiversity data repositories, and no GPS locations for the species in the images are included. We further used MTCNN on all images downloaded from GBIF and EOL to filter out identifiable images of people. There are no images with people in the BIOSCAN-5M or FathomNet Database to filter.
Considerations for Using the Data
We hope this dataset (and the model trained with it) can aid in conservation efforts and biodiversity research.
Bias, Risks, and Limitations
This dataset is imbalanced in its representation of various species with the greatest representation available for those in the phyla Tracheophyta, Arthropoda, and Chordata. The long-tailed distribution exhibited by taxonomic rank is to be expected working with biodiversity data, and results from both an imbalance in the availability of images and actual variance in class diversity. For instance, TreeOfLife-200M has a balanced representation between plants and animals (at the kingdom level), but animals represent a larger proportion of described species. Additionally, IUCN estimates 2,139,242 described species as of March 2025, the vast majority of which are invertebrates. Though described invertebrates outnumber vertebrates 20 to one, more than double the number of vertebrates have been evaluated (64K vertebrates to only 29K invertebrates) due to lack of available information.
Overall, 89% of images have full taxonomic labels. As discussed above, most of this gap is more indicative of the lack of consensus or available granularity in labeling, rather than missing information. BIOSCAN-5M is a good example of this, as the label granularity is still limited for insects (Insecta, one of the most diverse classes in the tree of life). In our resolved taxa for BIOSCAN-5M, 95.97% of images are labeled to the family level but only 30.78% and 6.81% of the images have genus or species indicated, respectively. This is a persistent challenge in species identification and part of the reason that large biological foundation models trained with taxonomic hierachies are useful. We highlight these taxonomic coverage limitations for a better understanding of both the data and our motivation, but do not wish to diminish the impact of our coverage of nearly 868K unique taxa labeled to the level of species; it far surpasses the species diversity of other well-known biological datasets.
We note also that our taxonomic resolution (TaxonoPy
) resulted in less than 1% unresolved cases, e.g., Metazoa
instead of Animalia
or incertae sedis
for kingdom:
Unresolved Kingdom | Number of Images |
---|---|
incertae sedis | 1060535 |
Archaeplastida | 33923 |
Metazoa | 24858 |
NULL | 5253 |
Recommendations
It is always important to understand the data with which one is working and take each dataset's uniqueness into account. Some considerations for TreeOfLife-200M:
- If using this dataset as more than just a training dataset (i.e., for validation or testing) be sure to keep
source_id
distinct across splits.- In these circumstances, it would also good to keep in mind that this dataset has a long-tail distribution (as one would expect from biological data).
- As noted above, there are some unresolved/misaligned kingdoms. Depending on one's use-case, these may be dropped or another attempt at re-alignment might be made (for instance with an updated version of
TaxonoPy
, as we intend to add profiles to address these outliers).
Licensing Information
The data (images and text) contain a variety of licensing restrictions mostly within the CC family. Each image and text in this dataset is provided under the least restrictive terms allowed by its licensing requirements as provided to us (i.e, we impose no additional restrictions past those specified by licenses in the license file).
All BIOSCAN-5M images are licensed under Creative Commons Attribution 3.0 Unported (CC BY 3.0).
FathomNet: All FathomNet images and annotations are shared under Creative Commons Attribution-Non Commercial-No Derivatives 4.0 International license (CC BY-NC-ND, more details on their terms).
EOL and GBIF images contain a variety of licenses ranging from CC0 to CC BY-NC-SA. The GBIF occurrence snapshot is licensed under Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC)
For license and citation information by image, see our provenance file.
This dataset (the compilation) has been marked as dedicated to the public domain by applying the CC0 Public Domain Waiver. However, images are often licensed under different terms (as noted above).
Citation
If you use this dataset in your research, please cite both it and our associated paper, as well as the constituent datasets (source data providers).
BibTeX:
Data
@dataset{treeoflife_200m,
title = {{T}ree{O}f{L}ife-200{M}},
author = {Jianyang Gu and Samuel Stevens and Elizabeth G Campolongo and Matthew J Thompson and Net Zhang and Jiaman Wu and Andrei Kopanev and Zheda Mai and Alexander E. White and James Balhoff and Wasila M Dahdul and Daniel Rubenstein and Hilmar Lapp and Tanya Berger-Wolf and Wei-Lun Chao and Yu Su},
year = {2025},
url = {https://huggingface.co/datasets/imageomics/TreeOfLife-200M},
doi = {},
publisher = {Hugging Face}
}
Please also cite our paper:
@article{gu2025bioclip,
title = {{B}io{CLIP} 2: Emergent Properties from Scaling Hierarchical Contrastive Learning},
author = {Jianyang Gu and Samuel Stevens and Elizabeth G Campolongo and Matthew J Thompson and Net Zhang and Jiaman Wu and Andrei Kopanev and Zheda Mai and Alexander E. White and James Balhoff and Wasila M Dahdul and Daniel Rubenstein and Hilmar Lapp and Tanya Berger-Wolf and Wei-Lun Chao and Yu Su},
year = {2025},
eprint={2505.23883},
archivePrefix={arXiv},
primaryClass={cs.CV},
url={https://arxiv.org/abs/2505.23883},
}
Please be sure to also cite the original data sources and all constituent parts as appropriate.
Source Data Providers
GBIF:
@misc{GBIF-DOI,
doi = {10.15468/DL.BFV433},
url = {https://doi.org/10.15468/dl.bfv433},
keywords = {GBIF, biodiversity, species occurrences},
author = {GBIF.org},
title = {{GBIF} Occurrence Download},
publisher = {The Global Biodiversity Information Facility},
month = {May},
year = {2024},
copyright = {Creative Commons Attribution Non Commercial 4.0 International}
}
EOL:
@misc{eol,
author = {{Encyclopedia of Life (EOL)}},
url = {https://eol.org},
note = {Accessed August 2024}
}
BIOSCAN-5M:
@inproceedings{gharaee2024bioscan5m,
title={{BIOSCAN-5M}: A Multimodal Dataset for Insect Biodiversity},
booktitle={Advances in Neural Information Processing Systems},
author={Zahra Gharaee and Scott C. Lowe and ZeMing Gong and Pablo Millan Arias
and Nicholas Pellegrino and Austin T. Wang and Joakim Bruslund Haurum
and Iuliia Zarubiieva and Lila Kari and Dirk Steinke and Graham W. Taylor
and Paul Fieguth and Angel X. Chang
},
editor={A. Globerson and L. Mackey and D. Belgrave and A. Fan and U. Paquet and J. Tomczak and C. Zhang},
pages={36285--36313},
publisher={Curran Associates, Inc.},
year={2024},
volume={37},
url={https://proceedings.neurips.cc/paper_files/paper/2024/file/3fdbb472813041c9ecef04c20c2b1e5a-Paper-Datasets_and_Benchmarks_Track.pdf},
}
FathomNet:
@article{katija_fathomnet_2022,
title = {{FathomNet}: {A} global image database for enabling artificial intelligence in the ocean},
volume = {12},
issn = {2045-2322},
shorttitle = {{FathomNet}},
url = {https://www.nature.com/articles/s41598-022-19939-2},
doi = {10.1038/s41598-022-19939-2},
number = {1},
urldate = {2025-05-13},
journal = {Scientific Reports},
author = {Katija, Kakani and Orenstein, Eric and Schlining, Brian and Lundsten, Lonny and Barnard, Kevin and Sainz, Giovanna and Boulais, Oceane and Cromwell, Megan and Butler, Erin and Woodward, Benjamin and Bell, Katherine L. C.},
month = sep,
year = {2022},
pages = {15914},
}
For license and citation information by image, see our provenance file.
Acknowledgements
This work was supported by the Imageomics Institute, which is funded by the US National Science Foundation's Harnessing the Data Revolution (HDR) program under Award #2118240 (Imageomics: A New Frontier of Biological Information Powered by Knowledge-Guided Machine Learning). Any opinions, findings and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation.
Dataset Card Authors
Elizabeth G. Campolongo
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