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devjas1
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Parent(s):
aecd727
(FEAT/DATASETS)[Demo Dataset Generation Script for ML Training]: Automate creation of synthetic polymer spectra for stable and weathered classes
Browse files- Script generates realistic synthetic spectra for both stable and weathered polymers, simulating noise, peak broadening, and chemical changes.
- Saves output in organized directory structure compatible with training pipeline, enabling quick prototyping and testing.
- Provides clear progress feedback and summary of dataset location and sample counts for user convenience.
- scripts/create_demo_dataset.py +141 -0
scripts/create_demo_dataset.py
ADDED
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"""
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Generate demo datasets for testing the training functionality.
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"""
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import numpy as np
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from pathlib import Path
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import sys
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import os
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# Add project root to path
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sys.path.append(os.path.abspath(os.path.join(os.path.dirname(__file__), "..")))
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def generate_synthetic_spectrum(
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wavenumbers, base_intensity=0.5, noise_level=0.05, peaks=None
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):
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"""Generate a synthetic spectrum with specified characteristics"""
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spectrum = np.full_like(wavenumbers, base_intensity)
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# Add some peaks
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if peaks is None:
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peaks = [
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(1000, 0.3, 50),
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(1500, 0.5, 80),
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(2000, 0.2, 40),
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] # (center, height, width)
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for center, height, width in peaks:
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peak = height * np.exp(-(((wavenumbers - center) / width) ** 2))
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spectrum += peak
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# Add noise
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spectrum += np.random.normal(0, noise_level, len(wavenumbers))
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# Ensure positive values
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spectrum = np.maximum(spectrum, 0.01)
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return spectrum
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def create_demo_datasets():
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"""Create demo datasets for training"""
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# Define wavenumber range (typical for Raman)
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wavenumbers = np.linspace(400, 3500, 200)
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# Create stable polymer samples
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stable_dir = Path("datasets/demo_dataset/stable")
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stable_dir.mkdir(parents=True, exist_ok=True)
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print("Generating stable polymer samples...")
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for i in range(20):
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# Stable polymers - higher intensity, sharper peaks
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stable_peaks = [
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(
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800 + np.random.normal(0, 20),
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0.4 + np.random.normal(0, 0.05),
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30 + np.random.normal(0, 5),
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),
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(
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1200 + np.random.normal(0, 30),
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0.6 + np.random.normal(0, 0.08),
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40 + np.random.normal(0, 8),
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),
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(
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1600 + np.random.normal(0, 25),
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0.3 + np.random.normal(0, 0.04),
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35 + np.random.normal(0, 6),
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),
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(
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2900 + np.random.normal(0, 40),
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0.8 + np.random.normal(0, 0.1),
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60 + np.random.normal(0, 10),
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),
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]
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spectrum = generate_synthetic_spectrum(
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wavenumbers,
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base_intensity=0.4 + np.random.normal(0, 0.05),
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noise_level=0.02,
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peaks=stable_peaks,
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)
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# Save as two-column format
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data = np.column_stack([wavenumbers, spectrum])
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np.savetxt(stable_dir / f"stable_sample_{i:02d}.txt", data, fmt="%.6f")
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# Create weathered polymer samples
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weathered_dir = Path("datasets/demo_dataset/weathered")
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weathered_dir.mkdir(parents=True, exist_ok=True)
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print("Generating weathered polymer samples...")
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for i in range(20):
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# Weathered polymers - lower intensity, broader peaks, additional oxidation peaks
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weathered_peaks = [
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(
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800 + np.random.normal(0, 30),
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0.2 + np.random.normal(0, 0.04),
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45 + np.random.normal(0, 10),
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),
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(
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1200 + np.random.normal(0, 40),
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0.3 + np.random.normal(0, 0.06),
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55 + np.random.normal(0, 12),
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),
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(
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1600 + np.random.normal(0, 35),
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0.15 + np.random.normal(0, 0.03),
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50 + np.random.normal(0, 8),
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),
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(
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1720 + np.random.normal(0, 20),
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0.25 + np.random.normal(0, 0.04),
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40 + np.random.normal(0, 7),
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), # Oxidation peak
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(
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2900 + np.random.normal(0, 50),
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0.4 + np.random.normal(0, 0.08),
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80 + np.random.normal(0, 15),
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),
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]
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spectrum = generate_synthetic_spectrum(
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wavenumbers,
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base_intensity=0.25 + np.random.normal(0, 0.04),
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noise_level=0.03,
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peaks=weathered_peaks,
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)
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# Save as two-column format
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data = np.column_stack([wavenumbers, spectrum])
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np.savetxt(weathered_dir / f"weathered_sample_{i:02d}.txt", data, fmt="%.6f")
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print(f"✅ Demo dataset created:")
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print(f" Stable samples: {len(list(stable_dir.glob('*.txt')))}")
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print(f" Weathered samples: {len(list(weathered_dir.glob('*.txt')))}")
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print(f" Location: datasets/demo_dataset/")
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if __name__ == "__main__":
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create_demo_datasets()
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