Datasets:

songlab
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TraitGym

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Subset (4)

complex_traits · 11.4k rows

Split (1)

test · 11.4k rows

chrom stringclasses 22 values	pos int64 99.5k 249M	ref stringclasses 4 values	alt stringclasses 4 values	pip float64 0 1	trait stringclasses 259 values	label bool 2 classes	maf float64 0 0.5	ld_score float64 1.53 628	consequence stringclasses 16 values	tss_dist int64 0 1.58M	match_group stringlengths 5 37
1	159,709,026	C	T	0		false	0.3307	69.033	intergenic_variant	5,562	intergenic_variant_5
1	159,714,396	T	A	0		false	0.30708	94.889	PLS	192	PLS_1
1	159,723,815	G	A	0.0038		false	0.32932	69.15	intergenic_variant	9,225	intergenic_variant_5
1	159,724,989	T	C	0.995381	CRP	true	0.32939	69.149	intergenic_variant	10,399	intergenic_variant_5
1	159,728,759	G	A	0.0006		false	0.32903	69.15	intergenic_variant	14,169	intergenic_variant_5
1	159,729,459	G	T	0		false	0.32895	69.188	intergenic_variant	14,869	intergenic_variant_5
1	159,733,652	T	A	0		false	0.32901	69.16	intergenic_variant	19,062	intergenic_variant_5
1	159,752,304	A	G	0.908923	CRP	true	0.007624	43.59	dELS	28,627	dELS_20
1	160,194,292	G	A	0		false	0.14204	47.397	dELS_flank	3,716	dELS_flank_10
1	160,285,165	G	A	0		false	0.061067	30.895	PLS	31	PLS_2
1	160,347,231	C	T	0.00057		false	0.4857	151.85	non_coding_transcript_exon_variant	2,873	non_coding_transcript_exon_variant_5
1	160,347,829	C	T	0.000575		false	0.48577	151.65	non_coding_transcript_exon_variant	2,275	non_coding_transcript_exon_variant_5
1	160,647,267	C	T	0		false	0.073276	31.718	PLS	222	PLS_2
1	160,662,948	G	T	0		false	0.21286	23.181	dELS	15,903	dELS_6
1	160,700,056	A	G	0		false	0.011912	6.4878	intron_variant	11,746	intron_variant_7
1	160,705,554	C	G	0		false	0.4711	44.645	dELS	6,248	dELS_24
1	160,714,701	T	C	0		false	0.32485	42.724	dELS	2,869	dELS_7
1	160,714,745	A	C	0		false	0.325	42.69	dELS	2,913	dELS_7
1	160,722,754	T	G	0.001196		false	0.37556	40.663	dELS_flank	10,922	dELS_flank_3
1	160,965,818	C	A	0.000591		false	0.32154	132.41	intergenic_variant	11,008	intergenic_variant_1
1	160,969,171	T	A	0		false	0.32119	132.72	intergenic_variant	14,361	intergenic_variant_1
1	160,969,654	A	G	0		false	0.32132	132.76	intergenic_variant	14,844	intergenic_variant_1
1	161,199,803	G	A	0		false	0.016291	15.302	pELS	487	pELS_1
1	161,219,103	T	G	0.997912	Plt	true	0.090434	65.775	3_prime_UTR_variant	3,807	3_prime_UTR_variant_2
1	161,262,982	C	A	0		false	0.42358	66.313	intron_variant	4,236	intron_variant_1
1	161,398,801	C	T	0		false	0.002294	52.263	pELS	30,924	pELS_5
1	161,422,274	C	T	0		false	0.089657	40.175	non_coding_transcript_exon_variant	54,397	non_coding_transcript_exon_variant_0
1	161,514,053	A	G	0		false	0.017928	12.884	pELS	154	pELS_1
1	161,721,796	G	A	0.000564		false	0.090397	50.207	5_prime_UTR_variant	251	5_prime_UTR_variant_5
1	161,721,827	G	A	0		false	0.054712	54.581	5_prime_UTR_variant	282	5_prime_UTR_variant_5
1	161,728,870	C	A	0.000628		false	0.43223	100.73	dELS	6,210	dELS_26
1	161,729,020	G	A	0.000637		false	0.43212	100.81	dELS	6,360	dELS_26
1	161,730,131	C	T	0.001164		false	0.43182	99.785	dELS	7,471	dELS_26
1	161,738,404	T	G	0.995452	ALP	true	0.043105	49.126	dELS_flank	11,381	dELS_flank_11
1	162,365,091	T	C	0		false	0.076784	25.619	5_prime_UTR_variant	315	5_prime_UTR_variant_5
1	162,500,401	C	T	0		false	0.47233	164.2	non_coding_transcript_exon_variant	2,582	non_coding_transcript_exon_variant_5
1	162,500,713	G	A	0		false	0.47236	164.26	non_coding_transcript_exon_variant	2,894	non_coding_transcript_exon_variant_5
1	162,507,069	G	A	0.000763		false	0.026292	32.177	intron_variant	9,250	intron_variant_4
1	162,577,797	A	G	0		false	0.21437	78.796	dELS	16,074	dELS_25
1	162,583,732	A	G	0		false	0.21443	78.529	dELS	22,009	dELS_25
1	162,822,771	A	G	0		false	0.03986	69.024	pELS	32,047	pELS_5
1	162,822,856	G	A	0		false	0.017887	78.855	pELS	32,132	pELS_5
1	162,823,037	A	C	0		false	0.017924	78.902	pELS	32,313	pELS_5
1	162,835,998	C	A	0		false	0.017778	78.589	dELS	23,665	dELS_13
1	162,840,421	C	A	0		false	0.017843	78.717	dELS	19,242	dELS_13
1	162,841,447	C	T	0		false	0.017784	78.75	dELS	18,216	dELS_13
1	162,875,295	A	G	0		false	0.32587	69.784	intergenic_variant	6,533	intergenic_variant_5
1	162,887,440	G	A	0.007097		false	0.38662	92.547	intergenic_variant	18,678	intergenic_variant_0
1	162,889,079	A	G	0.009404		false	0.38632	92.701	intergenic_variant	20,317	intergenic_variant_0
1	162,894,833	C	T	0.007903		false	0.3867	92.359	intergenic_variant	26,071	intergenic_variant_0
1	162,983,612	G	A	0		false	0.026677	82.194	dELS	85,162	dELS_22
1	163,230,917	C	T	0		false	0.14983	129.29	dELS_flank	13,280	dELS_flank_7
1	163,231,336	A	T	0		false	0.15001	129.08	dELS_flank	13,699	dELS_flank_7
1	164,589,690	G	A	0.971759	Lym	true	0.46405	36.168	dELS	26,884	dELS_21
1	164,590,299	A	G	0		false	0.47567	32.238	dELS	27,493	dELS_21
1	164,617,415	T	G	0		false	0.24354	43.741	dELS_flank	8,590	dELS_flank_14
1	164,617,881	C	T	0		false	0.2434	43.763	dELS_flank	8,124	dELS_flank_14
1	164,636,210	C	A	0		false	0.11782	16.189	dELS_flank	5,228	dELS_flank_9
1	164,703,078	G	T	0		false	0.22776	28.665	non_coding_transcript_exon_variant	2,734	non_coding_transcript_exon_variant_4
1	164,756,923	A	G	0		false	0.38213	40.363	dELS_flank	15,988	dELS_flank_3
1	164,759,299	A	G	0		false	0.38096	41.466	dELS_flank	13,612	dELS_flank_3
1	164,759,305	T	C	0		false	0.38103	41.461	dELS_flank	13,606	dELS_flank_3
1	164,769,934	T	C	0		false	0.21489	22.04	non_coding_transcript_exon_variant	2,977	non_coding_transcript_exon_variant_4
1	164,865,268	G	A	0		false	0.003448	6.9649	DNase-H3K4me3	72,596	DNase-H3K4me3_0
1	165,629,002	C	G	0.008048		false	0.020888	84.257	dELS_flank	2,210	dELS_flank_1
1	166,242,671	G	T	0		false	0.072517	43.652	intron_variant	75,669	intron_variant_10
1	167,093,909	T	C	0		false	0.30649	108.16	PLS	165	PLS_1
1	167,182,628	C	T	0		false	0.10034	54.997	dELS	16,148	dELS_5
1	167,480,845	A	G	0		false	0.34142	29.25	dELS_flank	25,157	dELS_flank_5
1	167,518,220	C	T	0		false	0.013667	13.322	pELS	308	pELS_1
1	167,553,951	T	A	0		false	0.48185	67.393	PLS	145	PLS_4
1	167,631,605	C	T	0.966865	Neutro,WBC	true	0.42417	68.236	pELS	1,372	pELS_2
1	167,721,830	C	A	0		false	0.077293	28.443	PLS	151	PLS_2
1	167,869,515	G	A	0		false	0.29247	43.174	dELS_flank	44,573	dELS_flank_0
1	167,875,326	C	T	0		false	0.020313	50.649	dELS	38,762	dELS_23
1	168,137,545	C	T	0		false	0.095456	116.47	5_prime_UTR_variant	27	5_prime_UTR_variant_0
1	168,143,621	C	A	0		false	0.38588	91.997	intergenic_variant	5,953	intergenic_variant_0
1	168,309,680	G	A	0		false	0.009431	6.844	intron_variant	12,055	intron_variant_7
1	169,004,043	G	A	0		false	0.014203	21.262	dELS_flank	101,653	dELS_flank_4
1	169,113,970	C	T	0		false	0.14833	57.328	dELS	3,102	dELS_18
1	169,114,100	T	C	0		false	0.1482	57.556	dELS	3,232	dELS_18
1	169,114,868	C	G	0		false	0.14784	58.534	dELS	4,000	dELS_18
1	170,224,684	G	C	1	AFib	true	0.074523	43.623	intron_variant	78,724	intron_variant_10
1	170,247,861	G	A	0		false	0.16708	111.05	dELS	101,901	dELS_17
1	170,461,431	A	G	0		false	0.005508	14.64	non_coding_transcript_exon_variant	70,699	non_coding_transcript_exon_variant_6
1	170,664,755	T	C	0.000673		false	0.26155	148.51	pELS	623	pELS_0
1	170,740,452	T	G	0.949674	BFP	true	0.44621	137.41	intergenic_variant	76,320	intergenic_variant_6
1	170,864,471	G	T	0		false	0.00541	18.161	non_coding_transcript_exon_variant	71,054	non_coding_transcript_exon_variant_6
1	171,226,920	T	G	0		false	0.42765	191.27	dELS	21,550	dELS_8
1	171,344,136	G	C	0		false	0.009654	79.947	pELS	29,952	pELS_5
1	171,435,122	C	G	0		false	0.25586	91.7	dELS	50,407	dELS_15
1	171,509,567	T	A	0.983489	eGFR	true	0.47183	155.69	non_coding_transcript_exon_variant	2,464	non_coding_transcript_exon_variant_5
1	171,841,377	C	T	0.000584		false	0.016947	30.144	PLS	94	PLS_0
1	171,858,497	A	G	0		false	0.001362	6.9232	intron_variant	16,967	intron_variant_2
1	172,459,629	G	C	0.002606		false	0.22313	98.282	dELS	6,735	dELS_2
1	172,746,562	A	G	0.975379	AG	true	0.1246	70.963	pELS	87,417	pELS_3
1	173,079,757	T	C	0		false	0.001968	6.9712	intergenic_variant	28,815	intergenic_variant_3
1	174,199,077	C	T	0		false	0.010048	25.855	intron_variant	39,486	intron_variant_9
1	175,366,415	A	G	0.000714		false	0.24902	94.934	dELS	39,948	dELS_15
1	175,521,171	C	A	0		false	0.002632	6.6381	intron_variant	114,806	intron_variant_13

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