SARS-CoV-2 against Streptococcus pneumoniae Genome by Blast Analysis
<|begin_of_text|><|start_header_id|>system<|end_header_id|> You are a research archivist expert in dataset metadata. Answer the question truthfully.  <|eot_id|><|start_header_id|>user<|end_header_id|> Here is the Description of a dataset. Description:'Introduction: The study was performed by blastn analysis with SARS-Cov-2 against Streptococcus pneumoniae H17 genomic sequences. Considering there is no hitting when blast analysis with whole length of SARS-Cov-2, we spliced the SARS-Cov-2 virus genome sequence into segments of 1,000bp with sliding windows of 50bp, and then conducted blast analysis on these segments against sequences of Streptococcus pneumoniae. Methods:The genome sequence of SARS-Cov-2 virus were spliced into segments of 1,000bp length, with starting positions shifting from 1 to 950 at interval of 50bp. In total 20 sets of segments were created. The 20 sets of SARS-Cov-2 genome segments were compared against sequences of Streptococcus pneumoniae downloaded from NCBI (https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/076/835/GCF_002076835.1_ASM207683v1/GCF_002076835.1' . Please return only a json list of at most 3 Keywords corresponding to the Description:.<|eot_id|><|start_header_id|>assistant<|end_header_id|> {"Answer" : ["SARS-CoV-2, Streptococcus pneumoniae, Genome, Blast Analysis"]} <|eot_id|>
 Here is the Description of a dataset. Description:'Introduction: The study was performed by blastn analysis with SARS-Cov-2 against Streptococcus pneumoniae H17 genomic sequences. Considering there is no hitting when blast analysis with whole length of SARS-Cov-2, we spliced the SARS-Cov-2 virus genome sequence into segments of 1,000bp with sliding windows of 50bp, and then conducted blast analysis on these segments against sequences of Streptococcus pneumoniae. Methods:The genome sequence of SARS-Cov-2 virus were spliced into segments of 1,000bp length, with starting positions shifting from 1 to 950 at interval of 50bp. In total 20 sets of segments were created. The 20 sets of SARS-Cov-2 genome segments were compared against sequences of Streptococcus pneumoniae downloaded from NCBI (https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/076/835/GCF_002076835.1_ASM207683v1/GCF_002076835.1' . Please return only a json list of at most 3 Keywords corresponding to the Description:.
Introduction: The study was performed by blastn analysis with SARS-Cov-2 against Streptococcus pneumoniae H17 genomic sequences. Considering there is no hitting when blast analysis with whole length of SARS-Cov-2, we spliced the SARS-Cov-2 virus genome sequence into segments of 1,000bp with sliding windows of 50bp, and then conducted blast analysis on these segments against sequences of Streptococcus pneumoniae. Methods:The genome sequence of SARS-Cov-2 virus were spliced into segments of 1,000bp length, with starting positions shifting from 1 to 950 at interval of 50bp. In total 20 sets of segments were created. The 20 sets of SARS-Cov-2 genome segments were compared against sequences of Streptococcus pneumoniae downloaded from NCBI (https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/076/835/GCF_002076835.1_ASM207683v1/GCF_002076835.1
SARS-CoV-2, Streptococcus pneumoniae, Genome, Blast Analysis