Data for the paper Ravichandran et al.,  Pronounced sequence specificity of the TET enzyme catalytic domain guides its cellular function
<|begin_of_text|><|start_header_id|>system<|end_header_id|> You are a research archivist expert in dataset metadata. Answer the question truthfully.  <|eot_id|><|start_header_id|>user<|end_header_id|> Here is the Description of a dataset. Description:'This repository contains the scripts and datasets for the paper Pronounced sequence specificity guides cellular function of TET enzymes, Ravichandran et al. Components of the analysisScriptsPython script to quantitate methylation by hexamer (call_hexamers.py).Python script to sort methylation according to CGI location (classify_CGI.py).    Python script to merge results and obtain summary tables (summarize.py).R Script to perform the Intra-motif positional preference analysis and plot the results in R (IMPP_analysis.R).R Scripts to determine sequence logos using linear regression for logarithmic rates (seqlogo_NgTET_weighted_in_vitro.html, seqlogo_mTET[1-3]_weighted_in_vitro.Rmd, seqlogo_TET-TKO-TET3-expression.Rmd).DatasetsCpG Illingworth be' . Please return only a json list of at most 3 Keywords corresponding to the Description:.<|eot_id|><|start_header_id|>assistant<|end_header_id|> {"Answer" : ["Epigenomics"]} <|eot_id|>
 Here is the Description of a dataset. Description:'This repository contains the scripts and datasets for the paper Pronounced sequence specificity guides cellular function of TET enzymes, Ravichandran et al. Components of the analysisScriptsPython script to quantitate methylation by hexamer (call_hexamers.py).Python script to sort methylation according to CGI location (classify_CGI.py).    Python script to merge results and obtain summary tables (summarize.py).R Script to perform the Intra-motif positional preference analysis and plot the results in R (IMPP_analysis.R).R Scripts to determine sequence logos using linear regression for logarithmic rates (seqlogo_NgTET_weighted_in_vitro.html, seqlogo_mTET[1-3]_weighted_in_vitro.Rmd, seqlogo_TET-TKO-TET3-expression.Rmd).DatasetsCpG Illingworth be' . Please return only a json list of at most 3 Keywords corresponding to the Description:.
This repository contains the scripts and datasets for the paper Pronounced sequence specificity guides cellular function of TET enzymes, Ravichandran et al. Components of the analysisScriptsPython script to quantitate methylation by hexamer (call_hexamers.py).Python script to sort methylation according to CGI location (classify_CGI.py).    Python script to merge results and obtain summary tables (summarize.py).R Script to perform the Intra-motif positional preference analysis and plot the results in R (IMPP_analysis.R).R Scripts to determine sequence logos using linear regression for logarithmic rates (seqlogo_NgTET_weighted_in_vitro.html, seqlogo_mTET[1-3]_weighted_in_vitro.Rmd, seqlogo_TET-TKO-TET3-expression.Rmd).DatasetsCpG Illingworth be
Epigenomics