How do I count the number of times 16384 patterns occur in the multifasta sequence having 25 sequences in perl
I am trying to get the count of 16384 patterns in the multifasta file that has 25 sequences stored as a hash value and the keys are chromosome numbers.Is there a efficient way of doing this. The number of lines in multifasta file is 61913917.Thanks.
How do I count the number of times 16384 patterns occur in the multifasta sequence having 25 sequences in perl
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I am trying to get the count of 16384 patterns in the multifasta file that has 25 sequences stored as a hash value and the keys are chromosome numbers.Is there a efficient way of doing this. The number of lines in multifasta file is 61913917.Thanks.