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#tax_id
stringlengths 1
7
| GeneID
stringlengths 1
9
| Symbol
stringlengths 1
61
⌀ | LocusTag
stringlengths 1
32
| Synonyms
stringlengths 1
1k
⌀ | dbXrefs
stringlengths 1
557
| chromosome
stringclasses 869
values | map_location
stringlengths 1
43
| description
stringlengths 1
1.86k
⌀ | type_of_gene
stringclasses 12
values | Symbol_from_nomenclature_authority
stringlengths 1
33
⌀ | Full_name_from_nomenclature_authority
stringlengths 1
246
| Nomenclature_status
stringclasses 3
values | Other_designations
stringlengths 1
1.96k
⌀ | Modification_date
stringlengths 8
8
| Feature_type
stringclasses 177
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7 | 5692769 | NEWENTRY | - | - | - | - | - | Record to support submission of GeneRIFs for a gene not in Gene (Azotirhizobium caulinodans. Use when strain, subtype, isolate, etc. is unspecified, or when different from all specified ones in Gene.). | other | - | - | - | - | 20230125 | - |
9 | 2827857 | NEWENTRY | - | - | - | - | - | Record to support submission of GeneRIFs for a gene not in Gene (Use when strain, subtype, isolate, etc. is unspecified, or when different from all specified ones in Gene.). | other | - | - | - | - | 20230125 | - |
11 | 10823747 | NEWENTRY | - | - | - | - | - | Record to support submission of GeneRIFs for a gene not in Gene (Cellvibrio gilvus. Use when strain, subtype, isolate, etc. is unspecified, or when different from all specified ones in Gene.). | other | - | - | - | - | 20230215 | - |
14 | 6951813 | NEWENTRY | - | - | - | - | - | Record to support submission of GeneRIFs for a gene not in Gene (Use when strain, subtype, isolate, etc. is unspecified, or when different from all specified ones in Gene.). | other | - | - | - | - | 20230306 | - |
19 | 3758873 | NEWENTRY | - | - | - | - | - | Record to support submission of GeneRIFs for a gene not in Gene (Pelobacter carbinolicus. Use when strain, subtype, isolate, etc. is unspecified, or when different from all specified ones in Gene.). | other | - | - | - | - | 20230306 | - |
24 | 5129993 | NEWENTRY | - | - | - | - | - | Record to support submission of GeneRIFs for a gene not in Gene (Alteromonas putrefaciens; Pseudomonas putrefaciens. Use when strain, subtype, isolate, etc. is unspecified, or when different from all specified ones in Gene.). | other | - | - | - | - | 20230125 | - |
24 | 77267466 | dnaA | N5094_RS00005 | N5094_00005 | - | - | - | chromosomal replication initiator protein DnaA | protein-coding | - | - | - | chromosomal replication initiator protein DnaA | 20231120 | - |
24 | 77267467 | dnaN | N5094_RS00010 | N5094_00010 | - | - | - | DNA polymerase III subunit beta | protein-coding | - | - | - | DNA polymerase III subunit beta | 20231120 | - |
24 | 77267468 | recF | N5094_RS00015 | N5094_00015 | - | - | - | DNA replication/repair protein RecF | protein-coding | - | - | - | DNA replication/repair protein RecF | 20230411 | - |
24 | 77267469 | gyrB | N5094_RS00020 | N5094_00020 | - | - | - | DNA topoisomerase (ATP-hydrolyzing) subunit B | protein-coding | - | - | - | DNA topoisomerase (ATP-hydrolyzing) subunit B | 20230411 | - |
24 | 77267470 | N5094_RS00025 | N5094_RS00025 | N5094_00025 | - | - | - | HDOD domain-containing protein | protein-coding | - | - | - | HDOD domain-containing protein | 20230411 | - |
24 | 77267471 | glyS | N5094_RS00030 | N5094_00030 | - | - | - | glycine--tRNA ligase subunit beta | protein-coding | - | - | - | glycine--tRNA ligase subunit beta | 20230411 | - |
24 | 77267472 | glyQ | N5094_RS00035 | N5094_00035 | - | - | - | glycine--tRNA ligase subunit alpha | protein-coding | - | - | - | glycine--tRNA ligase subunit alpha | 20240131 | - |
24 | 77267473 | N5094_RS00040 | N5094_RS00040 | N5094_00040 | - | - | - | DNA-3-methyladenine glycosylase I | protein-coding | - | - | - | DNA-3-methyladenine glycosylase I | 20240204 | - |
24 | 77267474 | N5094_RS00045 | N5094_RS00045 | N5094_00045 | - | - | - | amidohydrolase family protein | protein-coding | - | - | - | amidohydrolase family protein | 20231011 | - |
24 | 77267475 | N5094_RS00050 | N5094_RS00050 | N5094_00050 | - | - | - | MOSC domain-containing protein | protein-coding | - | - | - | MOSC domain-containing protein | 20231120 | - |
24 | 77267476 | tusA | N5094_RS00055 | N5094_00055 | - | - | - | sulfurtransferase TusA | protein-coding | - | - | - | sulfurtransferase TusA | 20231120 | - |
24 | 77267477 | fadA | N5094_RS00060 | N5094_00060 | - | - | - | acetyl-CoA C-acyltransferase FadA | protein-coding | - | - | - | acetyl-CoA C-acyltransferase FadA | 20230411 | - |
24 | 77267478 | fadB | N5094_RS00065 | N5094_00065 | - | - | - | fatty acid oxidation complex subunit alpha FadB | protein-coding | - | - | - | fatty acid oxidation complex subunit alpha FadB | 20230411 | - |
24 | 77267479 | pepQ | N5094_RS00070 | N5094_00070 | - | - | - | Xaa-Pro dipeptidase | protein-coding | - | - | - | Xaa-Pro dipeptidase | 20230411 | - |
24 | 77267480 | N5094_RS00075 | N5094_RS00075 | N5094_00075 | - | - | - | YigZ family protein | protein-coding | - | - | - | YigZ family protein | 20230411 | - |
24 | 77267481 | N5094_RS00080 | N5094_RS00080 | N5094_00080 | - | - | - | TrkH family potassium uptake protein | protein-coding | - | - | - | TrkH family potassium uptake protein | 20231120 | - |
24 | 77267482 | hemG | N5094_RS00085 | N5094_00085 | - | - | - | menaquinone-dependent protoporphyrinogen IX dehydrogenase | protein-coding | - | - | - | menaquinone-dependent protoporphyrinogen IX dehydrogenase | 20231120 | - |
24 | 77267483 | N5094_RS00090 | N5094_RS00090 | N5094_00090 | - | - | - | metalloregulator ArsR/SmtB family transcription factor | protein-coding | - | - | - | metalloregulator ArsR/SmtB family transcription factor | 20231011 | - |
24 | 77267484 | hemG | N5094_RS00095 | N5094_00095 | - | - | - | menaquinone-dependent protoporphyrinogen IX dehydrogenase | protein-coding | - | - | - | menaquinone-dependent protoporphyrinogen IX dehydrogenase | 20231120 | - |
24 | 77267485 | N5094_RS00100 | N5094_RS00100 | N5094_00100 | - | - | - | TrkH family potassium uptake protein | protein-coding | - | - | - | TrkH family potassium uptake protein | 20231011 | - |
24 | 77267486 | trkA | N5094_RS00105 | N5094_00105 | - | - | - | Trk system potassium transporter TrkA | protein-coding | - | - | - | Trk system potassium transporter TrkA | 20231120 | - |
24 | 77267487 | rsmB | N5094_RS00110 | N5094_00110 | - | - | - | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | protein-coding | - | - | - | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | 20230411 | - |
24 | 77267488 | fmt | N5094_RS00115 | N5094_00115 | - | - | - | methionyl-tRNA formyltransferase | protein-coding | - | - | - | methionyl-tRNA formyltransferase | 20230411 | - |
24 | 77267489 | def | N5094_RS00120 | N5094_00120 | - | - | - | peptide deformylase | protein-coding | - | - | - | peptide deformylase | 20231120 | - |
24 | 77267490 | N5094_RS00125 | N5094_RS00125 | N5094_00125 | - | - | - | LysM domain-containing protein | protein-coding | - | - | - | LysM domain-containing protein | 20230411 | - |
24 | 77267491 | dprA | N5094_RS00130 | N5094_00130 | - | - | - | DNA-processing protein DprA | protein-coding | - | - | - | DNA-processing protein DprA | 20231011 | - |
24 | 77267492 | N5094_RS00135 | N5094_RS00135 | N5094_00135 | - | - | - | DUF494 family protein | protein-coding | - | - | - | DUF494 family protein | 20240131 | - |
24 | 77267493 | N5094_RS00140 | N5094_RS00140 | N5094_00140 | - | - | - | type I DNA topoisomerase | protein-coding | - | - | - | type I DNA topoisomerase | 20231011 | - |
24 | 77267494 | N5094_RS00145 | N5094_RS00145 | N5094_00145 | - | - | - | L-threonylcarbamoyladenylate synthase | protein-coding | - | - | - | L-threonylcarbamoyladenylate synthase | 20230411 | - |
24 | 77267495 | hemF | N5094_RS00150 | N5094_00150 | - | - | - | oxygen-dependent coproporphyrinogen oxidase | protein-coding | - | - | - | oxygen-dependent coproporphyrinogen oxidase | 20230411 | - |
24 | 77267496 | N5094_RS00155 | N5094_RS00155 | N5094_00155 | - | - | - | group II truncated hemoglobin | protein-coding | - | - | - | group II truncated hemoglobin | 20230411 | - |
24 | 77267497 | aroE | N5094_RS00160 | N5094_00160 | - | - | - | shikimate dehydrogenase | protein-coding | - | - | - | shikimate dehydrogenase | 20230922 | - |
24 | 77267498 | N5094_RS00165 | N5094_RS00165 | N5094_00165 | - | - | - | DUF1488 domain-containing protein | protein-coding | - | - | - | DUF1488 domain-containing protein | 20231120 | - |
24 | 77267499 | N5094_RS00170 | N5094_RS00170 | N5094_00170 | - | - | - | gamma carbonic anhydrase family protein | protein-coding | - | - | - | gamma carbonic anhydrase family protein | 20230411 | - |
24 | 77267500 | N5094_RS00175 | N5094_RS00175 | N5094_00175 | - | - | - | 16S ribosomal RNA | rRNA | - | - | - | - | 20230411 | - |
24 | 77267501 | N5094_RS00180 | N5094_RS00180 | N5094_00180 | - | - | - | 23S ribosomal RNA | rRNA | - | - | - | - | 20230411 | - |
24 | 77267502 | rrf | N5094_RS00185 | N5094_00185 | - | - | - | 5S ribosomal RNA | rRNA | - | - | - | - | 20230411 | - |
24 | 77267503 | N5094_RS00190 | N5094_RS00190 | N5094_00190 | - | - | - | EAL domain-containing protein | protein-coding | - | - | - | EAL domain-containing protein | 20231011 | - |
24 | 77267504 | N5094_RS00195 | N5094_RS00195 | N5094_00195 | - | - | - | alpha/beta fold hydrolase | protein-coding | - | - | - | alpha/beta fold hydrolase | 20231120 | - |
24 | 77267505 | N5094_RS00200 | N5094_RS00200 | N5094_00200 | - | - | - | DUF885 domain-containing protein | protein-coding | - | - | - | DUF885 domain-containing protein | 20231011 | - |
24 | 77267506 | add | N5094_RS00205 | N5094_00205 | - | - | - | adenosine deaminase | protein-coding | - | - | - | adenosine deaminase | 20230411 | - |
24 | 77267507 | hemN | N5094_RS00210 | N5094_00210 | - | - | - | oxygen-independent coproporphyrinogen III oxidase | protein-coding | - | - | - | oxygen-independent coproporphyrinogen III oxidase | 20230411 | - |
24 | 77267508 | N5094_RS00215 | N5094_RS00215 | N5094_00215 | - | - | - | DUF2489 domain-containing protein | protein-coding | - | - | - | DUF2489 domain-containing protein | 20231120 | - |
24 | 77267509 | yihI | N5094_RS00220 | N5094_00220 | - | - | - | Der GTPase-activating protein YihI | protein-coding | - | - | - | Der GTPase-activating protein YihI | 20231011 | - |
24 | 77267510 | N5094_RS00225 | N5094_RS00225 | N5094_00225 | - | - | - | methyltransferase domain-containing protein | protein-coding | - | - | - | methyltransferase domain-containing protein | 20231120 | - |
24 | 77267511 | N5094_RS00230 | N5094_RS00230 | N5094_00230 | - | - | - | c-type cytochrome | protein-coding | - | - | - | c-type cytochrome | 20231120 | - |
24 | 77267512 | yihA | N5094_RS00235 | N5094_00235 | - | - | - | ribosome biogenesis GTP-binding protein YihA/YsxC | protein-coding | - | - | - | ribosome biogenesis GTP-binding protein YihA/YsxC | 20231120 | - |
24 | 77267513 | polA | N5094_RS00240 | N5094_00240 | - | - | - | DNA polymerase I | protein-coding | - | - | - | DNA polymerase I | 20230411 | - |
24 | 77267514 | elbB | N5094_RS00245 | N5094_00245 | - | - | - | isoprenoid biosynthesis glyoxalase ElbB | protein-coding | - | - | - | isoprenoid biosynthesis glyoxalase ElbB | 20230411 | - |
24 | 77267515 | glpG | N5094_RS00250 | N5094_00250 | - | - | - | rhomboid family intramembrane serine protease GlpG | protein-coding | - | - | - | rhomboid family intramembrane serine protease GlpG | 20230411 | - |
24 | 77267516 | glpE | N5094_RS00255 | N5094_00255 | - | - | - | thiosulfate sulfurtransferase GlpE | protein-coding | - | - | - | thiosulfate sulfurtransferase GlpE | 20240131 | - |
24 | 77267517 | tdh | N5094_RS00260 | N5094_00260 | - | - | - | L-threonine 3-dehydrogenase | protein-coding | - | - | - | L-threonine 3-dehydrogenase | 20231120 | - |
24 | 77267518 | N5094_RS00265 | N5094_RS00265 | N5094_00265 | - | - | - | glycine C-acetyltransferase | protein-coding | - | - | - | glycine C-acetyltransferase | 20240204 | - |
24 | 77267519 | N5094_RS00270 | N5094_RS00270 | N5094_00270 | - | - | - | TetR/AcrR family transcriptional regulator | protein-coding | - | - | - | TetR/AcrR family transcriptional regulator | 20231120 | - |
24 | 77267520 | waaA | N5094_RS00275 | N5094_00275 | - | - | - | lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase | protein-coding | - | - | - | lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase | 20230411 | - |
24 | 77267521 | N5094_RS00280 | N5094_RS00280 | N5094_00280 | - | - | - | 3-deoxy-D-manno-octulosonic acid kinase | protein-coding | - | - | - | 3-deoxy-D-manno-octulosonic acid kinase | 20230411 | - |
24 | 77267522 | N5094_RS00285 | N5094_RS00285 | N5094_00285 | - | - | - | glycosyltransferase family 9 protein | protein-coding | - | - | - | glycosyltransferase family 9 protein | 20230411 | - |
24 | 77267523 | N5094_RS00290 | N5094_RS00290 | N5094_00290 | - | - | - | glycosyltransferase family 25 protein | protein-coding | - | - | - | glycosyltransferase family 25 protein | 20230411 | - |
24 | 77267524 | N5094_RS00295 | N5094_RS00295 | N5094_00295 | - | - | - | glycosyltransferase | protein-coding | - | - | - | glycosyltransferase | 20230411 | - |
24 | 77267525 | rfbB | N5094_RS00300 | N5094_00300 | - | - | - | dTDP-glucose 4,6-dehydratase | protein-coding | - | - | - | dTDP-glucose 4,6-dehydratase | 20231011 | - |
24 | 77267526 | rfbA | N5094_RS00305 | N5094_00305 | - | - | - | glucose-1-phosphate thymidylyltransferase RfbA | protein-coding | - | - | - | glucose-1-phosphate thymidylyltransferase RfbA | 20231011 | - |
24 | 77267527 | N5094_RS00310 | N5094_RS00310 | N5094_00310 | - | - | - | FdtA/QdtA family cupin domain-containing protein | protein-coding | - | - | - | FdtA/QdtA family cupin domain-containing protein | 20230411 | - |
24 | 77267528 | N5094_RS00315 | N5094_RS00315 | N5094_00315 | - | - | - | acyltransferase | protein-coding | - | - | - | acyltransferase | 20230411 | - |
24 | 77267529 | N5094_RS00320 | N5094_RS00320 | N5094_00320 | - | - | - | DegT/DnrJ/EryC1/StrS family aminotransferase | protein-coding | - | - | - | DegT/DnrJ/EryC1/StrS family aminotransferase | 20230411 | - |
24 | 77267530 | N5094_RS00325 | N5094_RS00325 | N5094_00325 | - | - | - | CDP-glycerol glycerophosphotransferase family protein | protein-coding | - | - | - | CDP-glycerol glycerophosphotransferase family protein | 20230411 | - |
24 | 77267531 | N5094_RS00330 | N5094_RS00330 | N5094_00330 | - | - | - | glycosyltransferase family 2 protein | protein-coding | - | - | - | glycosyltransferase family 2 protein | 20231011 | - |
24 | 77267532 | rfbD | N5094_RS00335 | N5094_00335 | - | - | - | dTDP-4-dehydrorhamnose reductase | protein-coding | - | - | - | dTDP-4-dehydrorhamnose reductase | 20230411 | - |
24 | 77267533 | rfbC | N5094_RS00340 | N5094_00340 | - | - | - | dTDP-4-dehydrorhamnose 3,5-epimerase | protein-coding | - | - | - | dTDP-4-dehydrorhamnose 3,5-epimerase | 20230411 | - |
24 | 77267534 | N5094_RS00345 | N5094_RS00345 | N5094_00345 | - | - | - | DUF3413 domain-containing protein | protein-coding | - | - | - | DUF3413 domain-containing protein | 20230411 | - |
24 | 77267535 | coaD | N5094_RS00350 | N5094_00350 | - | - | - | pantetheine-phosphate adenylyltransferase | protein-coding | - | - | - | pantetheine-phosphate adenylyltransferase | 20230411 | - |
24 | 77267536 | N5094_RS00355 | N5094_RS00355 | N5094_00355 | - | - | - | capsule assembly Wzi family protein | protein-coding | - | - | - | capsule assembly Wzi family protein | 20230411 | - |
24 | 77267537 | mutM | N5094_RS00360 | N5094_00360 | - | - | - | bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase | protein-coding | - | - | - | bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase | 20231011 | - |
24 | 77267538 | N5094_RS00365 | N5094_RS00365 | N5094_00365 | - | - | - | hypothetical protein | protein-coding | - | - | - | hypothetical protein | 20230922 | - |
24 | 77267539 | moaA | N5094_RS00370 | N5094_00370 | - | - | - | GTP 3',8-cyclase MoaA | protein-coding | - | - | - | GTP 3',8-cyclase MoaA | 20231011 | - |
24 | 77267540 | N5094_RS00375 | N5094_RS00375 | N5094_00375 | - | - | - | bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB/molybdopterin molybdotransferase MoeA | protein-coding | - | - | - | bifunctional molybdopterin-guanine dinucleotide biosynthesis adaptor protein MobB/molybdopterin molybdotransferase MoeA | 20230411 | - |
24 | 77267541 | mobA | N5094_RS00380 | N5094_00380 | - | - | - | molybdenum cofactor guanylyltransferase MobA | protein-coding | - | - | - | molybdenum cofactor guanylyltransferase MobA | 20231120 | - |
24 | 77267542 | N5094_RS00385 | N5094_RS00385 | N5094_00385 | - | - | - | energy-coupling factor ABC transporter ATP-binding protein | protein-coding | - | - | - | energy-coupling factor ABC transporter ATP-binding protein | 20230411 | - |
24 | 77267543 | N5094_RS00390 | N5094_RS00390 | N5094_00390 | - | - | - | ABC transporter permease | protein-coding | - | - | - | ABC transporter permease | 20231120 | - |
24 | 77267544 | N5094_RS00395 | N5094_RS00395 | N5094_00395 | - | - | - | substrate-binding domain-containing protein | protein-coding | - | - | - | substrate-binding domain-containing protein | 20230411 | - |
24 | 77267545 | N5094_RS00400 | N5094_RS00400 | N5094_00400 | - | - | - | sigma-54 dependent transcriptional regulator | protein-coding | - | - | - | sigma-54 dependent transcriptional regulator | 20230929 | - |
24 | 77267546 | N5094_RS00405 | N5094_RS00405 | N5094_00405 | - | - | - | cache domain-containing protein | protein-coding | - | - | - | cache domain-containing protein | 20231120 | - |
24 | 77267547 | N5094_RS00410 | N5094_RS00410 | N5094_00410 | - | - | - | GNAT family N-acetyltransferase | protein-coding | - | - | - | GNAT family N-acetyltransferase | 20231011 | - |
24 | 77267548 | N5094_RS00415 | N5094_RS00415 | N5094_00415 | - | - | - | 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter | protein-coding | - | - | - | 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter | 20240204 | - |
24 | 77267549 | N5094_RS00420 | N5094_RS00420 | N5094_00420 | - | - | - | hypothetical protein | protein-coding | - | - | - | hypothetical protein | 20231011 | - |
24 | 77267550 | N5094_RS00425 | N5094_RS00425 | N5094_00425 | - | - | - | isochorismate synthase | protein-coding | - | - | - | isochorismate synthase | 20231120 | - |
24 | 77267551 | N5094_RS00430 | N5094_RS00430 | N5094_00430 | - | - | - | ABC transporter ATP-binding protein | protein-coding | - | - | - | ABC transporter ATP-binding protein | 20230411 | - |
24 | 77267552 | N5094_RS00435 | N5094_RS00435 | N5094_00435 | - | - | - | HD-GYP domain-containing protein | protein-coding | - | - | - | HD-GYP domain-containing protein | 20231120 | - |
24 | 77267553 | N5094_RS00440 | N5094_RS00440 | N5094_00440 | - | - | - | paraquat-inducible protein A | protein-coding | - | - | - | paraquat-inducible protein A | 20240204 | - |
24 | 77267554 | N5094_RS00445 | N5094_RS00445 | N5094_00445 | - | - | - | hypothetical protein | protein-coding | - | - | - | hypothetical protein | 20231011 | - |
24 | 77267555 | N5094_RS00450 | N5094_RS00450 | N5094_00450 | - | - | - | putative sulfate exporter family transporter | protein-coding | - | - | - | putative sulfate exporter family transporter | 20230929 | - |
24 | 77267556 | N5094_RS00455 | N5094_RS00455 | N5094_00455 | - | - | - | malate synthase | protein-coding | - | - | - | malate synthase | 20230411 | - |
24 | 77267557 | N5094_RS00460 | N5094_RS00460 | N5094_00460 | - | - | - | DUF3612 domain-containing protein | protein-coding | - | - | - | DUF3612 domain-containing protein | 20231120 | - |
24 | 77267558 | N5094_RS00465 | N5094_RS00465 | N5094_00465 | - | - | - | homocysteine S-methyltransferase family protein | protein-coding | - | - | - | homocysteine S-methyltransferase family protein | 20230411 | - |
24 | 77267559 | N5094_RS00470 | N5094_RS00470 | N5094_00470 | - | - | - | basic amino acid/polyamine antiporter | protein-coding | - | - | - | basic amino acid/polyamine antiporter | 20230411 | - |
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