Search is not available for this dataset
id
stringlengths 1
4
| sequence
stringlengths 27
237
| secondary_structure
stringlengths 27
237
|
|---|---|---|
0 | AACUUUCAGCAAUGGAUGUCUUGGCUCACGCAUCGAUGAAGGACGCAGCGAAAUGCGAUACGCAUUGUGAAUUGCAGAUUUCAGUGAACCAUCAGAUUUCUGAACGCACAUGGCGCUGCUGGUAUUUUGCCCGCAGCACGUCUGUUUCAGUGUCU | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((.....))))))))).................. |
1 | AAUUUUCAGCAAUGGAUGUCUUGGCUCGCGCAACGAUGAAGGACGCAGCGAACUGCGAAACGCAAUGUGGAAUUGCAGAAUUCAGUGAAUCAUCAGAUUUCUGAACGCAAUGCACCUGGGAUAUCUCCUGGUACGUCUGUUUCAGUGUCU | .......................................((((((((......)))).......(((.....((....))..........)))......))))...(((.)))(((((((.....))))))).................. |
2 | AAUUUUCAGCAAUGGAUGUCUUGGCUCGCGCAACGAUGAAGGACGCAGCGAACUGCAAACGCAAUGUGAAUUGCAGAAUUCAGUGAAUCAUCAGAUUUCUGAACGCAAAUGGCACCUUGGGGAUAUUCUCCUUGGUACGUCUGUUUCAGUGUCU | .......................................((((.(((......))).......(((....((....))..........)))......))))...(((...)))(((((((((.....))))))))).................. |
3 | AAUUUUCAACGAUGGAUGUCUUGGCUCCCAUAUCGAUGAAGAACGCAGCUAGAAUGCGAUAUGCAGUGUGAAUUGCAGAACCACGAAUCAUCGGAUCUUUGAACGCAACUGGCGCUGAUAAACUCAGCAUACUUGCUUCAGUGUGC | .......................................((((((((.......)))).......(((....((....))........)))......))))...(((...)))(((((.....))))).................. |
4 | AACCUUCAACGGUGGAUGUCUUGGCUCUCAUAUCGAUGAAGAACGCAGCAAAGUGCGAUAAGCAAUGCGAAUUGCAGACCGUGAGUCAUUAGAAUUUCGAAAGCAAUCUGCACCUCCGCCUAGCGAGAGGUAUGUCUGCUUCAGUGUUC | .......................................((((((((......)))).......(((....(.....)........)))......))))...(((...)))(((((((((..))))))))).................. |
5 | AACUUUCAGCAAUGGAUCUCUUGGCUCUUGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAACGCGAGUCAUCGAAAUUUUGAACGCACAUUGCACUUGGUGGCAUUCCGCCAAGUAUGUUUGUUUGAGUGUCU | .......................................((((((((......)))).......(((....(.....)........)))......))))...(((...)))(((((((((....))))))))).................. |
6 | AACUUUUAACAACGGAUCUCUUGGCUCUAGCAUCGAUGAAGAACGCAGCGAAACGCGAUAUGUAGUGUGAAUUGCAGAAUUCAGUGAAUCAUCGAAUCUUUGAACGCACAUGGCGCCUUCCAGUAUCCUGGGAGGCAUGCCUGUCCGAGCGUCG | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
7 | AACUUUCAACAACGGAUCUCUUGGUUCUGGCAUCGAUGAAGAACGCAGCGAAAUGCGAUAAGUAAUGUGAAUUGCAGAAUUCAGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCGCCGGUAUUCCGGCGGGCAUGCCUGUUCGAGCGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
8 | AACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAUUGCGAUAAGUAUUGUGAAUUGCAGAUUUUCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGUCCUCUGGUAUUCCAGGGGGCAUGCCUGUUUGAGCGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
9 | AACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCCUUGGUAUUCCAGGGGGCAUGCCUGUUUGAG | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....)))))))))............. |
10 | AACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCCUUGGUAUUCCAGGGGGCAUGCCUGUUUGAGCGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
11 | AACUUUCAGCAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAUUGCGAUAAGUAAUGUGAAUUGCAGAUUUUCGUGAAUCAUCGAAUCUUUGAACGCAUAUUGCGCUCUAUAGUAUUCUAUAGAGCAUGCCUGUUUGAGCGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
12 | AACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCCGAUACGUAAUAUGAAUUGCAGAUAUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCUCUGGUAUUCCGGAGGGCAUGCCUGUUUGAGCGUCG | .......................................((((((((......)).)).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
13 | AACUUUCAGCAAUGGAUCUCUUGGUUCCCGCGUCGAUGAAGAACGUGGCAAAAUGCGAUAAGUAGUGUGAAUUGCAGAAUUCAGUGACUCAUCGAAUUUUUGAACGCAUAUUGCGCUCCUCAGUAUUCUGUGGAGCAUGCCUGUUUGAGCGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
14 | AACUUUCAGCAACGGAUCUCUUGGCUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCUUUGGGUUAUUCCCAAAGGCAUGCCUGUUUGAGUGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((.....))))))))).................. |
15 | AACUUUCAACAACGGAUCUCUUGGCUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAUAAGUAAUGUGAAUUGCAGAAUUCAGUGAAUCAUCGAAUCUUUGAACGCACCUUGCGCUCCUUGGUAUUCCGAGGAGCAUGCCUGUUUGAGUGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
16 | AACUUUCAACAACGGAUCUCUUGGCUUCCACAUCGAUGAAGAACGCAGCGAAAUGCGAUAAGUAAUGUGAAUUGCAGAAUUCAGUGAAUCAUCGAGUCUUUGAACGCAACUUGCGCCCUUUGGUAUUCCGAAGGGCAUGCCUGUUUGAGAGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
17 | AACCCUAGGCAGGGGAUCACUCGGCUCAUGGAUCGAUGAAGACCGCAGCUAAAUGCGCGUCAGAAUGUGAACUGCAGGACACAUGAACACCGACACGUUGAACGAUAUUGCGCAUUGCACGACUCAGUGCGAUGUACACAUUUUUGAGUGCCC | .......................................((((((((......)))).......(((....((....))........)))......))))...((...).)(((((((((......))))))))).................. |
18 | GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAGUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACCUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGGGUCG | .......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((.....))))))))).................. |
19 | GACUCUUAGCGGUGGAUCACUCGGCUCGUGCGUCGAUGAAGAACGCAGCUAGCUGCGAGAAUUAAUGUGAAUUGCAGGACACAUUGAUCAUCGACACUUCGAACGCACUUGCGGCCCCGGGUUCCUCCCGGGGCUACGCCUGUCUGAGCGUCG | .......................................((((((((......)))).......(((....((....)).........)))......))))...(((..)))(((((((((.....))))))))).................. |
20 | GACUCUCAACGGUGGAUCACUCGGCUCGCGAGUCGAUGAAGGACGCAGCUAAGUGCGAGAAGUGGUGUGAAUUGCAGAACACAUUGAACGUCGACCUUCGAACGCGAAUGGCGGUCUCGGGUUAAUCCGGGACCACGUCUGCCUCAGGGUUG | .......................................((((((((......)))).......(((....((....)).........))).....))))...(((...)))(((((((((....))))))))).................. |
21 | GACUCUUAACGGUGGAUCACUCGGCUCGCGAGUCGAUGAAGGACGCAGCCAAGUGCGAGAAGUAAUGUGAAUUGCAGAACACAUUGAACGUCGACCUUCUGAACGCGAAUUGCGGUCUCGGGUCAAUCCCGGGACCGCGUCUGCCUCAGGGUCG | .......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((.....))))))))).................. |
22 | AUCUCUUAGCGGUGGAUCACUCGGCUCGAGCGUCGAUGAAGGACGGAGCUAGCUCCGAGAAGUAAUGUGAAUUGCAGGACACAUUGAGCAUCGAUAUUCUGAACGCGUAUUGCGGCCUCGGGUAAUCCUGGGGCCACGUCCGUCUCAGGGUCU | .......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((....))))))))).................. |
23 | UAGCUUCAGCGAUGGAUCGGUUGCAUCGAGUAUCGAUGAAGAACGCAGCUUGCUGCGUUACUUACCACGAAUUGCAGACGCUUAGAGUGGUGAAAUUUCGAACGCAUAGCACCAACUGGGCCUCCAGUUGGUACGUCUGGUUCAGGGUUG | .......................................((((((((......)))).......(((....(.....).........)))......))))...((...))(((((((((....))))))))).................. |
24 | AACUCGUAACGGUGGAUGUCUCGGCUCCUACAUCGAUGAAGAACGUAGCAAACUGCGAAACGUAAUGCGAAUUGCAGAACUCGUGAAUCAUCAAAUUUUUGAACGCAAGUGGCGCUCGCGGGUAACCCUGCGAGCAUGUCUGUUUGAGUGUCC | .......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((....))))))))).................. |
25 | AACUCGUGACGGAGGAUAUCUUGGCUCCCACAUCGAUGAAGAACGCAGCAAAAUGCGAUACGUAGUGUGAAUUGCAGAACAUGUGAAUCAUCGAAUUUUUGAACGCAAGUGGCGCUCGCGGGCAAUCCUGCGAGCAUGUCUGUUUGAGUGUCC | .......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))(((((((((....))))))))).................. |
26 | AACUCUCAGCAACGGAUAUCUUGGCUCUUGCAACGAUGAAGAACGCAGCGAAAUGCGAUACGUAGUGUGAAUUGCAGAAUUCCGCGAAUCAUCGAGUUUUUGAACGCAAGUUGCGCCCGAGGCUCGUCCGAGGGCAUUCCUGCCAGAGCGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))((((((((.....)))))))).................. |
27 | GACUCUCAGCAACGGAUAUCUUGGCUCCCGCAACGAUGAAGAACGCAGCGAAAUGCGAUAUCUAGUGUGAAUUGCAGAAUUCCGCGAAUCAUCGAGUUUUUGAACGCAUGUUGCGCCCGAGGCUUUGCCGAGGGCAUGUCUGCCUGAGCGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((...))))))))).................. |
28 | GACUCUCGGCAACGGAUAUCUCGGCUCUCGCAUCGAUGAAGAACGUAGCGAAAUGCGAUACCUGGUGUGAAUUGCAGAAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCGAGGCCAUCCGGCCGAGGGCACGCCUGCCUGGGCGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((......))))))))).................. |
29 | GACUCUCGGCAACGGAUAUCUCGGCUCUCGCAUCGAUGAAGAACGUAGCGAAAUGCGAUACUUGGUGUGAAUUGCAGAAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCGAAGCCACUAGGGCACGUCUGCCUGGGCGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((....))))))).................. |
30 | GACUCUCGGCAACGGAUAUCUCGGCUCUCGCAUCGAUGAAGAACGUAGCGAAAUGCGAUACUUGGUGUGAAUUGCAGAAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCGAAGCCGUUACGCGAGGGCACGUCUGCCUGGGCGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))((((((.((......)))))))).................. |
31 | GACUCUCGGCAACGGAUAUCUCGGCUCUCACAUCGAUGAAGAACGUAGCGAAAUGCGAUACUUGGUGUGAAUUGCAGAAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCCAAGCCUUCUGGCCGAGGGCACGUCUGCCUGGGUGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((......))))))))).................. |
32 | GACUCUCGGCAACGGAUAUCUUGCUCUCGCAUCGAUGAAGAACGUAGCGAAAUGCGAUACUUGGUGUGAAUUGCAAGAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCCAAGCCUUCUGGCCGAGGGCACGUCUGCCUGGGUGUCA | ......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((......))))))))).................. |
33 | GACUCUCGGCAACGGAUAUCUCGGCUCUCGCAUCGAUGAAGAACGUAGCGAAAUGCGAUACUUGGUGUGAAUUGCAGAAUCCCGUGAACCAUCGAGUCUUUGAACGCAAGUUGCGCCCCAAGCCUUCUGGCCGAGGGCACGUCUGCCUGGGUGUCA | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((......))))))))).................. |
34 | AACUUUUAGCAAUGGAUGUCUUGGGUCACACAACGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGCGAAUUGCAGAACUUCGUGAAUCAUCAAAAUUUUGAACGCACAUUGCGCUACUGAGUAAUCUCAGUAGCAUGCUUAUCUGAGUGUCU | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
35 | AACUUUCAGCAACGGAUGUCUUGGCUCCCACAACGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGCGAAUUGCAGAAUUCCGCGAGUCAUCAAACCUUUGAACGCACCUUGCGCUUUCGGGAUAUGCCCGUUAGCAUGUUUGUUGGAGUGUCU | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((.....))))))))).................. |
36 | AACUUUCAGCGAUGGAUAUCUUGGCUCUCGCAACGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGCGAAUUGCAGAAUUCAGUGAAUCAUCAAAACUUUGAACGCAAAUUGCGCUUCCGGGUAUCCCUGGGAGCAUGCCUGUAUGAGUGUCU | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
37 | AACUUUCAGCAGUGGAUGUCUAGGCUCGCACAUCGAUGAAGAACGCUGCGAACUGCGAUACGUAAUGCGAAUUGCAGGAUUCAGUGAGUCAUCGAAAUUUUGAACGCAUAUUGCACUUCCGGGUUAGUCCUGGGAGUAUGCCUGUAUCAGUGUCC | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((.....))))))))).................. |
38 | AACUUUCAGCGACGGAUGUCUUGGCUCCCACAACGAUGAAGAACGCAGCGAAAUGCGAUACGUCUUGCGACUUGCAGAAUCCAGUGAAUCAUCAAAACUUUGAACGCAUCUGCGUUCCGGGAUAUGCCUGGGAGCAUGCUUGUCGGAGUGUCU | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((..)))((((((((.....))))))).).................. |
39 | AACUUUCAGCGACGGAUAUCUAGGCUCCCACAACGAUGAAGAACGCAGCGAAAUGCGAUACGUCUUGCGACUUGCAGAACCCAGUGAAUCAUCAAACCUUCGAACGCACCUUGCGCUCUCGGGCAUUCCCGGGAGCAUGCUUGUCGGAGUGUCC | .......................................((((((((......)))).......(((....((....))..........)))......))))...(((...)))(((((((((....))))))))).................. |
40 | CACUUUCAGCAACGGAUGUCUCGGUUCCCAUAACGAUGAAGAACGCAGCGAAAUGCGAUACGUAAUGCGAAACGCAUCAGUAGUGAGUCAUCGAAACUUUGAACGCAACUUGCACUUCCCUUUGGGGAGUAUAUCUAUUGGAGUGUCU | .......................................((((((((......)))).......(((....((....)).........)))......))))...(((...)))((((((.....)))))).................. |
41 | AUACUUACCUGGCAGGGGAGACACCAUGAUCAGGCAGGUGGUUUUCCCAGGGCGAGGCUCAUCCCCUGCACUCCGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
42 | AUACUUACCUGGCAGGGGAGACACCAUGAUCAGGCAGGUGGUUUUCCCAGGGCGAGGCUCAUCCCCUGCACUCCGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
43 | ACUUACCUGGCAGGGGAGACACCAUGAUCAGGCAGGUGGUUUUCCCAGGGCGAGGCUCAUCCCCUGCACUCCGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG | .........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
44 | AUACUUACCUGGCAGGGGAGACACCAUGAUCAGGCAGGUGGUUUUCCCAGGGCGAGGCUCAUCCCCUGCACUCCGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
45 | AUACUUACCUGGCAGGGGAGACACCAUGAUCAGGCAGGUGGUUUUCCCAGGGCGAGGCUCAUCCCCUGCACUCCGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
46 | AUACUUACCUGGCAGGGGAGAUACCAUGAUCAUGAAGGUGGUUUUCCCAGGGCGAGGCUCACCCAUUUGCACUGUUGGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGAUGCAAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG | ...........(((.((((((.(((((..........))))))))))).(((......(((.((............))..)).).....)))..(((.((.((.......))))...))).)))..............(((((.(((((....))))).))))). |
47 | AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUCACCCAUUGCACUUUGGGGUGUGCUGACCCCUGCGAUUUCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGAGCUGCGUUCGCGCGCCCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........))..)).).....)))..(((.((.((......))))...))).))))...............(((((..(((((....))))).))))). |
48 | AUACUUACCUGGCAGGGGAGAUACCAUGAUCAUGAAGGUGGUUUUCCCAGGGCGAGGCUCACCCAUUGCACUUUGGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........))..)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
49 | AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGUGUAUCCAUUGCAUCCGGAUGUGCUGACCACUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUUGUGCUCUCCCCUU | ...........((((((((((.(((((..........))))))))))).(((......(((.((.........)).)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
50 | AUACUUACCUGGCAGGGGAGAUACCAUGAUCAUGAAGGUGGUUUUCCCAGGGCGAGGCUCACCCAUUGCACUUUGGGGUGUGCUGACCCCUGCGAUUUCCCCAAAUGCGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUCUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........))..)).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
51 | AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGCCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....))).(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
52 | AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGCCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....))).(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
53 | AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGCCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....))).(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
54 | AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGCCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....))).(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
55 | AUACUUACCUGGCAGGGGAGAUACCAUGAUCACGAAGGUGGUUUUCCCAGGGCGAGGCUUAUCCAUUGCACUCCGGAUGUGCUGCCCCUGCGAUUUCCCCAAAUGUGGGAAACUCGACUGCAUAAUUUGUGGUAGUGGGGGACUGCGUUCGCGCUUUCCCCUG | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........)).)).).....))).(((.((.((.......))))...))).))))...............(((((.(((((....))))).))))). |
56 | AUACUUACCUGGCGCAGGGGUAGCAUUGAUCAAGAAGGAUGCACCCCCAGGACGAGGCUUGCUAUUGCACACCGGCUCGCUGAAGCUUGCGAUUCCCUCAAACGUAGGGAACUCGGGCGUAUUAUUUAUGGUAGCGGGGAUCUGCGUUCGCGCUAUCCCCUU | ...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))..............(((((..(((((....))))).))))). |
57 | AUACUUACCUGGCGCAGGGGUCGCAUUGAUCAAGAAGGAUGCACCCCCAGGGCGAGGCUUGCCAUUGCACUCCGGCUUGCUGAACCUUGCGAUUCCCCCAAACGUGGGGAACUCGGGCGUAUUAUUUAUGGUAGCGGAGAUCUGCGUUCGCGCUAUCUCCUA | ...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))..............(((((..(((((....))))).))))). |
58 | AUACUUACCUGGCGCAGGGGUCGCAUUGAUCAAGAAGGAUGCACCCCCAGGGCGAGGCUUGCCAUUGCACUCCGGCUUGCUGAACCUUGCGAUUCCCCCAAACGUGGGGAACUCGGGCGUAUUAUUUAUGGUAGCGGAGAUCUGCGUUCGCGCUAUCUCCU | ...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))...............(((((.(((((....)))))))))). |
59 | AUACUUACCUGGCGCAGGGGUCGCAUUGAUCAAGAAGGAUGCACCCCCAGGGCGAGGCUUGCCAUUGCACUCCGGCUUGCUGAACCUUGCGAUUCCCCCAAACGUGGGGAACUCGGGCGUACAAUUUAUGGUAGCGGAGAUCUGCGUUCGCGCUAUCUCCUA | ...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))..............(((((..(((((....))))).))))). |
60 | AUACUUACCUGGCGCAGGGGUCGCAUUGAUCAAGAAGGAUGCACCCCCAGGGCGAGGCUUGCCAUUGCACUCCGGCUUGCUGAACCUUGCGAUUCCCCCAAACGUGGGGAACUCGGGCGUACAAUUUAUGAUAGCGGAGAUCUGCGUUCGCGCUAUCUCCUA | ...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))..............(((((..(((((....))))).))))). |
61 | AUACUUACCUGGCGCAGGGGUCGCAUUGAUCAAGAAGGAUGCACCCCCAGGGCGAGGCUUGCCAUUGCACUCCGGCUUGCUGAACCUUGCGAUUCCCCCAAACGUGGGGAACUCGGGCGUACAAUUUAUGGUAGCGGAGAUCUGCGUUCGCGCUAUCUCCUA | ...........((((((((((.(((((..........)))))))))))(((......(.(.((..........)).).).....)))..(((.((.((.......))))...))).))))..............(((((..(((((....))))).))))). |
62 | AAACUUACCUGGCUGGGGGUUAUUUCGCGAUCACAAAGGCGGAAUCCCCAUGGUUAGGCCUACCCAUUGCACUUUUGGUGCGGGCUGACCUGUGUGGCAGUCUCGAGUUGAGAUUCGCCAACAGCUUAAUUUUUGCGUAUCGGGGCUGCGUGCGCGCGGCCCUGA | ...........((((((((((..(((((..........))))))))))).(((......(((.((...........))..)).).....)))..(((.((.((.......)).))..))).))))...............((((((((((....)))))))))). |
63 | AAACUUACUUGGCGCCGGGACCAGGGUGAUCACGAAUGCCCUGGCCCCAGGUGGAGGCUCGCCAUUGCACUCCGGCGUGUUGAAGCCUGCGACGAUCCCUAAUUGGGUGCGCUCGGACGCGUAGUUUUUGUCAGUGGGGAGGUCUUCGGAUCAUCCUU | ...........((((((((((.(((((..........))))))))))).(((......(((((..........)))).).....)))..(((.((.((......)).))...))).))))...............(((((((((....)))).))))) |
64 | AUACUUACCUGGACGGGGUCAAUGGGCGAUCAAUAAGACCUAUGGCCUAGGCUUGUGACCUCCAUUGCACUUUGGAGGGGUGCCUGCCUAAGGUCGGCCCAAGUGGUCGAGCCUACGUCAUAAUUUGUUACAGCGGGGGCCUGCGUUCGCGCGGCCCUACC | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))). |
65 | AUACUUACCUGGACGGGGUCAAUGGGCGAUCAAUAAGACCUAUGGCCUAGGCUUGUGACCUCCAUUGCACUUUGGAGGGGUGCCUGCCUAAGGUCGACCCAAGUGGUCGAGCCUACGUCAUAAUUUGUUGCUGUGGGGGCCUGCGUUCGCGCGGCCCUGCC | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))). |
66 | AUACUUACCUGGACGGGGUUAAUGGGCGAUCAAUAAGACCCAUGGGCCUAGGUUGGUGACCUCCAUUGCACUUUGGAGGGGUGCCUACCUAAGGUCGGCUCAAGUAGUCGAGCCUACGUCAUAAUUUGUUGCAGUGGGCCUGCGUUCGCGCGGCCCCUAC | ...........((((((((((.(((((..........))))))))))).(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............((((.(((((....))))).)))).. |
67 | AUACUUACCUGGACGGGGUCAAUGGGUGAUCAAUAAGACCCAAUGACCCAGGCUUGUGACCUACAUUGCACUUUGGAGGGGUGCCUGCCUAAGGUCAGCCCAAGUGGUUGAGCCUAUGUCAUAAUUUGUUGCAGUGGGUGCCUGUGUUUGCGCACGCCCUAC | ...........((((((((((.(((((..........))))).))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............(((((..(((((....))))).))))). |
68 | AUACUUACCUGGACGGGGUCAAUGGGCGAUCAAUAAGACCCAUGGCCUAGGCUUGUGACCUCCAUUGCACUUUGGAGGGGUGCCUGCCUAAGGUCGACCUAAGUGGUCGGGCCUAUGUCAUAAUUUGUUGCUGUGGGGGCCUGCGUUCUGCGCGCCCCUG | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((...))))).))))). |
69 | UUACUUACCUGGACGGGGUCAAUGGGCAAUCAAUAAGACCCAUGGCCUAGGUUGGUGACCUCCAUUGCACUUUGGAGGGGUGCCUUCCUAAGGUCGACCCAAGUGGUCGAGCCUAUGUCAUAAUUUGUUGCAGUGGGGGCCAGCGUUCGCGCGGCCCCUAC | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............(((((..(((((....))))).))))). |
70 | AUACUUACCUGGACGGGGUCAAUGGGUAAUCAAGAAGUUCCAUGGCCUAGGUUGGUGACCUCCAUUGCACUAAGGAGGGGUGCUUGCCUAAGGUCGACCCAAGUGGUUGAGCCUACGUCAUAAUUUGUUGUUGCAGAGGGGGCCUGUGUUCGCGCAGCCCCUAC | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).)))).................(((((..(((((....))))).))))). |
71 | AUACUUACCUGGACGGGGUCAAUAGGCGAUCAAUAAGACCCAUGGCCUAGGUUGGUGACCUCCAUUGCACUUUGGAGGGGUGCCAAUCUAAGGUCGGCCCAAGUGGUCGAGCCUACGUCAUAAUUUGUUGCUGUGAGGGCCUGUGUUCGCGCGGCCCCUGC | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))). |
72 | AUACUUACCUGGACGGGGUCAAUGGGCGAUCAUGAACACCCAUGGCCUAGGUUGGUGACCAUCAUUGCACUUUGAAGGGGUGCCCGCCUAAGGUCGGCCCAAGUGGUCGAGCCUACGUCAUAAUUUGUUGCUGAGGGGGCCUGCGUUCGCGCGGCCCCUGC | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............(((((..(((((....))))).))))). |
73 | UUACUUACCUGGACGGGGUCAAUUGGCGAUCAUGAAGGUCCAUGGCCUAGGUUGGUAACCUCCAUUGCACUUAGGAGAGGUGCCUACCUAAGAUCGGCCCAAGUGGCCGAAUCUACGUCAUAAUUUGUUGCUGAGGGGGCCUGCGUUCGCGCGGCCCCUGC | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............(((((..(((((....))))).))))). |
74 | AUACUUACCUGGACGGGGUCUAUGGGCGAUCAUGUAGGUCCAUGGCCUAGGUUGGUGACUUUCAUUGCACUUUGGAGGGGUGCCCGCCUAAGAUCAGCCCAAGAGGUUGAGUCUACAUCAUAAUUUGUUGCUGAGGGGGCAUGCGUUCGCGCAGCCCCUGC | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))..............(((((..(((((....))))).))))). |
75 | AUACUUACCUGGAUGGGGUCGAUGGGUGAUCAUGAAGGCCCAUGGCUAGGAUUGUGACCUCCAUUGCACUUAGGAGGGGUGCUUUCCUAAGGUCUACCCAAGUGGUGGAGCCUACAUCAUAAUUUGUUGCCUGAGGGGGCCUGCGUUCGCGCGGCCCCCAC | ...........((((.(((((.(((((..........))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((..(((((....))))).))))). |
76 | AUACUUACCUGGAUGGGGUCAAUGGGUGAUCAAGAAGGCCCAUGGCUAGGCAAGUGACCUCCAUUGCACUUAGGAGGGGUGCUAGCCUAAGGUCUACCCAAGUGGUGGAGCCUACAUCAUAAUUUGUUGCUGUGGGGGCCUGUGUUCGCGCGGCCCCCUC | ...........((((.(((((.(((((..........))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))). |
77 | AUACUUACCUGGAUGGGGUCAAUGGGUGAUCAUGAAGGCCCAUGGCUAGGCAAGUGACUUCCAUUGCACUUAGGAGGGGUGCUUGCCUAAGGUCUACCCAAGUGGUGGAACCUACAUCAUAAUUUGUUGCUGUGGGGGCCUGCGUUCGCGCGGCCCUCUU | ...........((((.(((((.(((((..........))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))). |
78 | AUACUUACCUGGACGGGGUCAAUGGAUGAUCAAUAAGGUCCAUGGCCUAGGGAAGUAACCUCCAUUGCACUUAGGAGGGGUGCUUUCCUAAGGUCUGCCCAAGUGGCAGAGCCUACGUCAUAAUUUGUGGUAGUGGGGGCUUGCGUUCGCGCAGCCCCUUC | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))). |
79 | AUACUUACCUGGACGGGGUCAAUGGAUGAUCAAGAAGGUCCAUGGCCUAGGGAAGUAACCUCCAUUGCACUGAGGAGGGGUGCCUUUCUAAGGUCUGUCCAAGUGACAGAGCCUACGUCAUAAUUUGUGGUAGUGGGGGCCUGCGUUCGCGCGGCCCCUUU | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))). |
80 | AUACUUACCUGGACGGGGUCAAUGGAUGAUCUAUAAGGUCCAUGGCCUAGGGAAGUGACCUUCAUUGCACUCAGAAGGGGUGCUACUCUAAGGUCUGUCCAAGUGAUGGAGCCUACGUCAUAAUUUGUGGUAGUGGGGGCCUGCGUUCGCGCGGCCCCUUA | ...........((((((((((.(((((..........)))))))))))(((......(((.((..........))..)).).....))).(((.((.((.....)).))..))).))))...............(((((.(((((....))))).))))). |
81 | AUCCGAGUGCAAGGGCGUUAUCCAUCUCAAUGAGGCUUUGCCGAGAGUGGAUUUUUGCUAGUUGAAAACUAUACACUGACCGCUCCUACUUGGGUUCGCCUGGGUAGGGAAUUUUUGGAACACUUUUCCUAUGGAAACUUUUCUUUCAUUGCGAUCGGUCCUUUAUGAACUGGCGCGAAGAAGG | ................((.(((((.(((................))))))))..))....((((............))))...(((((((((((....)))))))))))............((((.......................................................)))) |
82 | AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUAUUGCUGGUUGAAAUUUAUUUUUAACCAUGACCUCCUCCUCAUAACGUAUUGUGUCUUUCAUUUUACACAUGUGUUAUGCAGGGAAUUUUUGGAACCUACCUUUUUUUCCUUCUUCAAGAAG | ................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((.....................)))))))))).)))............((((..................)))) |
83 | AUCCUUAUGCAAGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAAACCAGACCUGCUCCUCAUUGUCGCCAGUUAGAUGUUCGCUUCAUGAACAUCUCAGAUAAUGUAGGGAAUUUUUGGAAUACUUUUAUUUUCUAAUCAUGAAUUUUCCCAUCAAGAUAACCGAUGAGAGAAGGAGU | ................((.(((((.(((.................))))))))..))....((((...............))))....(((((((((((((...........................)).)))))))).)))............((((................................................)))) |
84 | AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCGCUUAUCGGUGUUCGCUUUUGAAUACUUCAAGACUAUGUAGGGAAUUUUUGGAAUUUUUUUCUUAUUUAUCGAUAUUUAAACUUUCAAAA | ................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((...........................)))))))))).)))............((((...........................)))) |
85 | AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCUACUAUGGGUGUUCGCUUUUGAACACUUCAAGACUAUGUAGGGAAUUUUUGGAAUAUUUUCUCAUAU | ................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((...........................)))))))))).)))............((((....)))) |
86 | AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCGUUUAUCGGUGUUCGCUUUUGAAUACUUCAAGACUAUGUAGGGAAUUUUUGGAAUAUUUCUUUUA | ................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((...........................)))))))))).)))..............((....)) |
87 | AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCAAUUCGGUGUUCGCUUUUGAAUACUUCAAGACUAUGUAGGGAAUUUUUGGAAUACCUUUUUUCAUUACCGAUAUUCAUUCUUUCAAAGGGACUGUUUAUUUUUCUUUGGAAGUAAUAUCAAAAAAUAGGU | ................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((.........................)))))))))).)))............((((.....................................................................)))) |
88 | AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCAAUUCGGUGUUCGCUUUUGAAUACUUCAAGACUAUGUAGGGAAUUUUUGGAAUACCUUUUUUCAUUACCGAUAUUCAUUCUUUCAAAGGGACUGUUUAUUUUUCUUUGGAAGUAAUAUCAAAAAAUAGGU | ................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((.........................)))))))))).)))............((((.....................................................................)))) |
89 | AUCCUUAUGCACGGGAAAUACGCAUAUCAGUGAGGAUUCGUCCGAGAUUGUGUUUUUGCUGGUUGAAAUUUAAUUAUAAACCAGACCGUCUCCUCAUGGUCAAUUCUGUGUUCGCUUUUGAACACUUCAGGACUAUGUAGGGAAUUUUUGGAAUACUUUUUUUUCGUUUACCGAUAUUCAUUCUUUCAAAGAAACUUUUCAUCUUUCUUUGGAAGU | ................((.(((((.(((.................))))))))..))....((((.................))))....(((((((((((((.........................)))))))))).)))............((((......................................................)))) |
90 | AGCUUAGCGCAGUGGCAAUACCGUAACCAAUGAAGCCUCCCUGAGGUGCGGUUAUUGCUAGUUGAAAACUUUAACCAACCCACGCCAUGGGACGUGAAAUACCGUCCACUACGGCAAUUUUUGGAAGCCCUUACGAGGG | ................((.(((((.(((................))))))))..))....((((...........))))....(((((((((((((...)).))))))))..)))............((((....)))) |
91 | AUCUCUGCGCAGUGGCGAUAUCGUAACCAAUGAGGUUCUACCGAGGUGCGAUUAUUGCUAGUUGAAAACUUUUACCAAUACCCCGCCAAGACGAUGUGAAAUACCAUCGGCUACGGCAAUUUUUGACAGCCCUUACGAGGG | ................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....)))) |
92 | AGCUUUGCGCAGUGGCGAUAUCGUAACCAAUGAAGGUUUACUGAGGUGCGAUUAUUGCUAGUUGAAAACUUAUACCAAUACCCCGCCUAGGAAAUGUGUAAUACCAUUUCCUAUGGCAAUUUUUGAAAGCUUCUAAGGAAG | ................((.(((((.(((................))))))))..))....((((...........)))).....(((((((((((((......)))))))))).)))............((((....)))) |
93 | AGCUUUGCGCAGUGGCAGUAUCGUAGCCGAUGAGGUCUAACCGAGGCGCGAUUAUUGCUUAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUGCGGAGA | ................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....)))) |
94 | AGCUUUGCGCAGUGGCAAUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACGGUCUCUACGGAGA | ................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....)))) |
95 | AGCUUUGCGCAGUGGCAAUAUCGUAGCCAGUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUACGGAGA | ................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....)))) |
96 | AGCUUUGCGCAGUGGCAGUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUACGGAGA | ................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....)))) |
97 | AGCUUUGCGCAGUGGCAGUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUUCGGAGA | ................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....)))) |
98 | AGCUUUGCGCAGUGGCAGUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGAAAUAUAGUCGGCAUUGGCAAUUUUUGACGGUCUCUACGGAGA | ................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((...)).))))))))..)))............((((....)))) |
99 | AGCUUUGCGCAGUGGCAGUAUCGUAGCCAAUGAGGUUUAUCCGAGGCGCGAUUAUUGCUAAUUGAAAACUUUUCCCAAUACCCCGCCGUGACGACUUGCAAUAUAGUCGGCAUUGGCAAUUUUUGACAGUCUCUACGGAGA | ................((.(((((.(((................))))))))..))....((((...........)))).....(((.((((((((((....))))))))))..)))............((((....)))) |
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RIVAS
The RIVAS dataset is a curated collection of RNA sequences and their secondary structures, designed for training and evaluating RNA secondary structure prediction methods. The dataset combines sequences from published studies and databases like Rfam, covering diverse RNA families such as tRNA, SRP RNA, and ribozymes. The secondary structure data is obtained from experimentally verified structures and consensus structures from Rfam alignments, ensuring high-quality annotations for model training and evaluation.
Disclaimer
This is an UNOFFICIAL release of the RIVAS dataset by Elena Rivas, et al.
The team releasing RIVAS did not write this dataset card for this dataset so this dataset card has been written by the MultiMolecule team.
Example Entry
| id | sequence | secondary_structure |
|---|---|---|
| AACY020454584.1_604-676 | ACUGGUUGCGGCCAGUAUAAAUAGUCUUUAAG... | ((((........)))).........((........ |
Column Description
The converted dataset consists of the following columns, each providing specific information about the RNA secondary structures, consistent with the bpRNA standard:
id: A unique identifier for each RNA entry. This ID is derived from the original
.stafile name and serves as a reference to the specific RNA structure within the dataset.sequence: The nucleotide sequence of the RNA molecule, represented using the standard RNA bases:
- A: Adenine
- C: Cytosine
- G: Guanine
- U: Uracil
secondary_structure: The secondary structure of the RNA represented in dot-bracket notation, using up to three types of symbols to indicate base pairing and unpaired regions, as per bpRNA's standard:
- Dots (
.): Represent unpaired nucleotides. - Parentheses (
(and)): Represent base pairs in standard stems (page 1). - Square Brackets (
[and]): Represent base pairs in pseudoknots (page 2). - Curly Braces (
{and}): Represent base pairs in additional pseudoknots (page 3).
- Dots (
Variations
This dataset is available in three variants:
- RIVAS: Includes TrainSetA (3166 sequences) for training, TestSetA (697 sequences) for validation and TestSetB (430 sequences) for testing.
- RIVAS-A: Includes TrainSetA (3166 sequences) and TestSetA (697 sequences), emphasizing sequence diversity while minimizing overlap between training and test sets. Suitable for evaluating RNA secondary structure prediction models on diverse RNA families.
- RIVAS-B: Consists of TrainSetB (1094 sequences) and TestSetB (430 sequences) derived from Rfam alignments, offering additional structural diversity and RNA types not present in RIVAS-A. Designed for testing the generalization capability of models trained on different types of RNA structures.
Related Datasets
- bpRNA-spot: A subset of RIVAS that applies CD-HIT (CD-HIT-EST) to remove sequences with more than 80% sequence similarity from RIVAS.
- RNAStrAlign: A database of RNA secondary with the same families as ArchiveII, usually used for training.
License
This dataset is licensed under the AGPL-3.0 License.
SPDX-License-Identifier: AGPL-3.0-or-later
Citation
@article{rivas2012a,
author = {Rivas, Elena and Lang, Raymond and Eddy, Sean R},
journal = {RNA},
month = feb,
number = 2,
pages = {193--212},
publisher = {Cold Spring Harbor Laboratory},
title = {A range of complex probabilistic models for {RNA} secondary structure prediction that includes the nearest-neighbor model and more},
volume = 18,
year = 2012
}
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