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Age
stringclasses 4
values | Sex
stringclasses 2
values | Mouse ID
stringclasses 21
values | Tissue
stringclasses 23
values | Number of cells
float64 6
1.28k
⌀ |
|---|---|---|---|---|
3m | female | 3_38_F | Aorta | 19 |
null | null | null | BAT | 108 |
null | null | null | Bladder | 65 |
null | null | null | Brain_Myeloid | 1,102 |
null | null | null | Brain_Non-Myeloid | 368 |
null | null | null | Diaphragm | 161 |
null | null | null | GAT | 175 |
null | null | null | Heart | 658 |
null | null | null | Kidney | 116 |
null | null | null | Large_Intestine | 535 |
null | null | null | Limb_Muscle | 323 |
null | null | null | Lung | 380 |
null | null | null | MAT | 169 |
null | null | null | Mammary_Gland | 658 |
null | null | null | Marrow | 879 |
null | null | null | Pancreas | 380 |
null | null | null | SCAT | 302 |
null | null | null | Skin | 348 |
null | null | null | Spleen | 309 |
null | null | null | Thymus | 318 |
null | null | null | Tongue | 136 |
null | null | null | Trachea | 305 |
null | null | 3_38_F/3_39_F | Heart | 75 |
null | null | 3_39_F | Aorta | 68 |
null | null | null | BAT | 66 |
null | null | null | Bladder | 84 |
null | null | null | Brain_Myeloid | 852 |
null | null | null | Brain_Non-Myeloid | 238 |
null | null | null | Diaphragm | 274 |
null | null | null | GAT | 193 |
null | null | null | Heart | 1,093 |
null | null | null | Kidney | 73 |
null | null | null | Large_Intestine | 849 |
null | null | null | Limb_Muscle | 201 |
null | null | null | Lung | 336 |
null | null | null | MAT | 147 |
null | null | null | Mammary_Gland | 577 |
null | null | null | Marrow | 770 |
null | null | null | Pancreas | 353 |
null | null | null | SCAT | 251 |
null | null | null | Skin | 348 |
null | null | null | Spleen | 315 |
null | null | null | Thymus | 350 |
null | null | null | Tongue | 267 |
null | null | null | Trachea | 280 |
null | null | 3_56_F | BAT | 104 |
null | null | null | Bladder | 179 |
null | null | null | Brain_Myeloid | 294 |
null | null | null | Brain_Non-Myeloid | 106 |
null | null | null | GAT | 194 |
null | null | null | Heart | 673 |
null | null | null | Large_Intestine | 595 |
null | null | null | Liver | 82 |
null | null | null | MAT | 223 |
null | null | null | Mammary_Gland | 356 |
null | null | null | SCAT | 235 |
null | null | 3_57_F | Liver | 79 |
null | null | null | Mammary_Gland | 321 |
null | male | 3_10_M | Aorta | 97 |
null | null | null | BAT | 83 |
null | null | null | Bladder | 327 |
null | null | null | Brain_Myeloid | 1,019 |
null | null | null | Brain_Non-Myeloid | 997 |
null | null | null | Diaphragm | 149 |
null | null | null | GAT | 223 |
null | null | null | Heart | 319 |
null | null | null | Kidney | 63 |
null | null | null | Large_Intestine | 590 |
null | null | null | Limb_Muscle | 89 |
null | null | null | Lung | 117 |
null | null | null | Marrow | 1,250 |
null | null | null | Pancreas | 405 |
null | null | null | SCAT | 183 |
null | null | null | Skin | 504 |
null | null | null | Spleen | 229 |
null | null | null | Tongue | 333 |
null | null | null | Trachea | 267 |
null | null | 3_10_M/3_11_M | Heart | 63 |
null | null | 3_11_M | Aorta | 52 |
null | null | null | BAT | 155 |
null | null | null | Brain_Non-Myeloid | 252 |
null | null | null | Diaphragm | 319 |
null | null | null | GAT | 175 |
null | null | null | Heart | 397 |
null | null | null | Kidney | 137 |
null | null | null | Large_Intestine | 329 |
null | null | null | Limb_Muscle | 74 |
null | null | null | Liver | 420 |
null | null | null | Lung | 122 |
null | null | null | MAT | 265 |
null | null | null | SCAT | 257 |
null | null | null | Skin | 342 |
null | null | null | Spleen | 325 |
null | null | null | Thymus | 196 |
null | null | 3_8_M | Aorta | 79 |
null | null | null | BAT | 26 |
null | null | null | Bladder | 311 |
null | null | null | Brain_Myeloid | 587 |
null | null | null | Brain_Non-Myeloid | 601 |
null | null | null | GAT | 245 |
End of preview. Expand
in Data Studio
A single-cell transcriptomic atlas characterizes ageing tissues in the mouse
Code to download and process this dataset is available in: https://github.com/seanome/2025-longevity-x-ai-hackathon
Dataset structure is originally from AnnData.
Descriptions of each data file is below.
transcriptomic-atlas-mouse_expression.parquet
The main expression matrix containing gene expression data.
transcriptomic-atlas-mouse_sample_metadata.parquet
Metadata for each sample/cell in the dataset.
transcriptomic-atlas-mouse_feature_metadata.parquet
Metadata for each feature/gene in the dataset.
transcriptomic-atlas-mouse_unstructured_metadata.json
Additional unstructured metadata about the dataset.
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