assembly_accession string | bioproject string | biosample string | wgs_master string | refseq_category string | taxid int64 | species_taxid int64 | organism_name string | infraspecific_name string | isolate string | version_status string | assembly_level string | release_type string | genome_rep string | seq_rel_date string | asm_name string | asm_submitter string | gbrs_paired_asm string | paired_asm_comp string | ftp_path string | excluded_from_refseq string | relation_to_type_material string | asm_not_live_date string | assembly_type string | group string | genome_size int64 | genome_size_ungapped int64 | gc_percent float64 | replicon_count int64 | scaffold_count int64 | contig_count int64 | annotation_provider string | annotation_name string | annotation_date string | total_gene_count int64 | protein_coding_gene_count int64 | non_coding_gene_count int64 | pubmed_id string |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GCF_000001215.4 | PRJNA164 | SAMN02803731 | na | reference genome | 7,227 | 7,227 | Drosophila melanogaster | na | na | latest | Chromosome | Major | Full | 2014-08-01 | Release 6 plus ISO1 MT | The FlyBase Consortium/Berkeley Drosophila Genome Project/Celera Genomics | GCA_000001215.4 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/215/GCF_000001215.4_Release_6_plus_ISO1_MT/ | na | na | na | haploid | invertebrate | 143,706,478 | 142,553,500 | 42 | 7 | 1,869 | 2,441 | FlyBase | FlyBase Release 6.54 | 2023-12-26 | 17,872 | 13,962 | 3,543 | 10731132;12537568;12537572;12537573;12537574;16110336;17569856;17569867;25589440;26109356;26109357 |
GCF_000001405.40 | PRJNA168 | na | na | reference genome | 9,606 | 9,606 | Homo sapiens | na | na | latest | Chromosome | Patch | Full | 2022-02-03 | GRCh38.p14 | Genome Reference Consortium | GCA_000001405.29 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/405/GCF_000001405.40_GRCh38.p14/ | na | na | na | haploid-with-alt-loci | vertebrate_mammalian | 3,099,441,038 | 2,948,318,359 | 41 | 24 | 470 | 996 | NCBI RefSeq | GCF_000001405.40-RS_2025_08 | 2025-08-01 | 59,792 | 20,076 | 22,235 | 7219534;10508508;10830953;11237011;11780052;12508121;12815422;12853948;14574404;15057823;15057824;15164053;15164054;15372022;15496913;15616553;15772651;15815621;16177791;16421571;16541075;16554811;16572171;16625196;16641997;16710414;18477386 |
GCF_000001635.27 | PRJNA169 | na | na | reference genome | 10,090 | 10,090 | Mus musculus | strain=C57BL/6J | na | latest | Chromosome | Major | Full | 2020-06-24 | GRCm39 | Genome Reference Consortium | GCA_000001635.9 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/635/GCF_000001635.27_GRCm39/ | na | na | na | haploid | vertebrate_mammalian | 2,728,206,152 | 2,654,605,538 | 42 | 21 | 101 | 305 | NCBI RefSeq | GCF_000001635.27-RS_2024_02 | 2024-02-01 | 50,763 | 22,198 | 17,705 | 12954771;19468303;21750661 |
GCF_000001735.4 | PRJNA116 | SAMN03081427 | na | reference genome | 3,702 | 3,702 | Arabidopsis thaliana | ecotype=Columbia | na | latest | Chromosome | Minor | Full | 2018-03-15 | TAIR10.1 | The Arabidopsis Information Resource (TAIR) | GCA_000001735.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/735/GCF_000001735.4_TAIR10.1/ | na | na | na | haploid | plant | 119,146,348 | 118,960,704 | 36 | 5 | 5 | 100 | TAIR and Araport | Annotation submitted by TAIR and Araport | 2022-10-20 | 38,312 | 27,562 | 5,884 | 10574454;10617197;10617198;11130712;11130713;11130714;29519893 |
GCF_000002075.1 | PRJNA209509 | SAMN02953658 | AASC00000000.3 | reference genome | 6,500 | 6,500 | Aplysia californica | na | F4 #8 | latest | Scaffold | Major | Full | 2013-05-15 | AplCal3.0 | Broad Institute | GCA_000002075.2 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/075/GCF_000002075.1_AplCal3.0/ | na | na | na | haploid | invertebrate | 927,296,314 | 737,783,370 | 40.5 | 0 | 4,331 | 164,544 | NCBI RefSeq | NCBI Aplysia californica Annotation Release 102 | 2020-08-18 | 21,514 | 19,405 | 2,038 | 16230032 |
GCF_000002235.5 | PRJNA13728 | SAMN00829422 | AAGJ00000000.6 | reference genome | 7,668 | 7,668 | Strongylocentrotus purpuratus | na | Spur 01 | latest | Scaffold | Major | Full | 2019-09-06 | Spur_5.0 | Baylor College of Medicine | GCA_000002235.4 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/235/GCF_000002235.5_Spur_5.0/ | na | na | na | haploid | invertebrate | 921,840,143 | 921,502,643 | 37.5 | 0 | 870 | 1,545 | NCBI RefSeq | NCBI Strongylocentrotus purpuratus Annotation Release 102 | 2019-09-18 | 33,503 | 27,447 | 5,500 | 3172215;7515499;8392708;17095691 |
GCF_000002285.5 | PRJNA12384 | SAMN02953603 | AAEX00000000.4 | reference genome | 9,615 | 9,612 | Canis lupus familiaris | breed=boxer | Tasha | latest | Chromosome | Major | Full | 2020-10-06 | Dog10K_Boxer_Tasha | Dog Genome Sequencing Consortium | GCA_000002285.4 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/285/GCF_000002285.5_Dog10K_Boxer_Tasha/ | na | na | na | haploid | vertebrate_mammalian | 2,312,785,471 | 2,312,726,632 | 41.5 | 39 | 146 | 1,161 | NCBI RefSeq | NCBI Canis lupus familiaris Annotation Release 106 | 2020-12-08 | 40,373 | 20,087 | 15,286 | 9878232;16341006 |
GCF_000002415.2 | PRJNA20431 | SAMN02953638 | AAKM00000000.1 | reference genome | 5,855 | 5,855 | Plasmodium vivax | strain=Salvador I | Salvador I | latest | Chromosome | Major | Full | 2009-05-06 | ASM241v2 | TIGR | GCA_000002415.2 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/415/GCF_000002415.2_ASM241v2/ | na | na | na | haploid | protozoa | 27,007,701 | 26,959,301 | 42.5 | 14 | 2,747 | 2,763 | TIGR | Annotation submitted by TIGR | 2023-04-03 | 5,510 | 5,392 | 76 | 15901839;18843361 |
GCF_000002425.5 | PRJNA453215 | SAMN00120126 | ABEU00000000.3 | reference genome | 3,218 | 3,218 | Physcomitrium patens | na | na | latest | Chromosome | Major | Full | 2024-09-24 | Phypa V5 | Moss Genome Consortium | GCA_000002425.3 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/425/GCF_000002425.5_Phypa_V5/ | na | na | na | haploid | plant | 471,971,527 | 467,421,614 | 33.5 | 27 | 357 | 2,149 | NCBI RefSeq | GCF_000002425.5-RS_2025_04 | 2025-04-18 | 24,540 | 21,535 | 2,556 | 12084583;12954768;15002671;15447656;15912445;17175527;18079367;29237241 |
GCF_000002435.2 | PRJNA15590 | SAMN02952905 | AACB00000000.3 | reference genome | 5,741 | 5,741 | Giardia duodenalis | strain=WB C6 | na | latest | Chromosome | Major | Full | 2019-11-06 | UU_WB_2.1 | Marine Biological Laboratory | GCA_000002435.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/435/GCF_000002435.2_UU_WB_2.1/ | na | na | na | haploid | protozoa | 12,078,186 | 11,673,475 | 49.5 | 5 | 35 | 38 | Marine Biological Laboratory | Annotation submitted by Marine Biological Laboratory | 2020-12-10 | 5,388 | 4,965 | 103 | 17901334 |
GCF_000002445.2 | PRJNA15565 | SAMN02953625 | na | reference genome | 185,431 | 5,691 | Trypanosoma brucei brucei TREU927 | strain=927/4 GUTat10.1 | na | latest | Chromosome | Major | Full | 2005-12-14 | ASM244v1 | Trypanosoma brucei consortium | GCA_000002445.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/445/GCF_000002445.2_ASM244v1/ | na | na | na | haploid | protozoa | 26,075,494 | 26,071,904 | 46.5 | 11 | 12 | 50 | Trypanosoma brucei consortium | Annotation submitted by Trypanosoma brucei consortium | 2018-04-13 | 10,221 | 8,758 | 556 | 12907729;16020724;16020726 |
GCF_000002455.1 | PRJNA27939 | na | na | na | 227,086 | 227,086 | Bigelowiella natans | na | na | latest | Chromosome | Major | Partial | 2006-07-28 | ASM245v1 | University of Melbourne, Australia | GCA_000002455.1 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/455/GCF_000002455.1_ASM245v1/ | partial | na | na | haploid | protozoa | 372,870 | 372,870 | 28.5 | 3 | 3 | 3 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2007-12-06 | 426 | 344 | 78 | 16760254;16990439 |
GCF_000002495.2 | PRJNA1433 | SAMN02953596 | AACU00000000.3 | reference genome | 242,507 | 318,829 | Pyricularia oryzae 70-15 | strain=70-15 | na | latest | Chromosome | Major | Full | 2011-10-14 | MG8 | International Rice Blast Genome Consortium | GCA_000002495.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/495/GCF_000002495.2_MG8/ | na | na | na | haploid | fungi | 40,979,121 | 40,949,321 | 51.5 | 7 | 53 | 216 | International Rice Blast Genome Consortium | Annotation submitted by International Rice Blast Genome Consortium | 2019-11-29 | 13,184 | 12,825 | 228 | 15846337 |
GCF_000002515.2 | PRJNA12377 | SAMEA3138170 | na | reference genome | 28,985 | 28,985 | Kluyveromyces lactis | strain=NRRL Y-1140 | na | latest | Complete Genome | Major | Full | 2004-07-02 | ASM251v1 | Genolevures Consortium | GCA_000002515.1 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/515/GCF_000002515.2_ASM251v1/ | na | na | na | haploid | fungi | 10,689,156 | 10,689,156 | 39 | 6 | 6 | 6 | Genolevures Consortium | Annotation submitted by Genolevures Consortium | 2025-07-15 | 5,335 | 5,084 | 251 | 15229592;15691736 |
GCF_000002595.2 | PRJNA21061 | SAMN02953692 | ABCN00000000.2 | reference genome | 3,055 | 3,055 | Chlamydomonas reinhardtii | strain=CC-503 cw92 mt+ | na | latest | Chromosome | Major | Full | 2018-01-26 | Chlamydomonas_reinhardtii_v5.5 | DOE Joint Genome Institute | GCA_000002595.3 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/595/GCF_000002595.2_Chlamydomonas_reinhardtii_v5.5/ | na | na | na | haploid | plant | 111,098,438 | 107,048,224 | 64 | 17 | 53 | 1,512 | DOE Joint Genome Institute | Annotation submitted by DOE Joint Genome Institute | 2021-08-17 | 17,742 | 17,742 | 0 | 17932292 |
GCF_000002655.1 | PRJNA14003 | SAMN00115746 | AAHF00000000.1 | reference genome | 330,879 | 746,128 | Aspergillus fumigatus Af293 | strain=Af293 | na | latest | Chromosome | Major | Full | 2005-06-10 | ASM265v1 | J. Craig Venter Institute | GCA_000002655.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/655/GCF_000002655.1_ASM265v1/ | na | na | na | haploid | fungi | 29,384,958 | 28,809,958 | 50 | 8 | 8 | 19 | J. Craig Venter Institute | Annotation submitted by J. Craig Venter Institute | 2025-12-11 | 10,086 | 9,823 | 262 | 16372009 |
GCF_000002715.2 | PRJNA18467 | SAMN02953636 | AAKD00000000.3 | reference genome | 344,612 | 5,057 | Aspergillus clavatus NRRL 1 | strain=NRRL 1 | na | latest | Scaffold | Minor | Full | 2006-12-14 | ASM271v1 | J. Craig Venter Institute | GCA_000002715.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/715/GCF_000002715.2_ASM271v1/ | na | assembly from type material | na | haploid | fungi | 27,859,441 | 27,850,641 | 49 | 0 | 143 | 231 | J. Craig Venter Institute | Annotation submitted by J. Craig Venter Institute | 2025-09-15 | 9,375 | 9,117 | 235 | 18404212 |
GCF_000002725.2 | PRJNA15564 | SAMEA3138173 | na | reference genome | 347,515 | 5,664 | Leishmania major strain Friedlin | strain=Friedlin | na | latest | Complete Genome | Major | Full | 2011-02-14 | ASM272v2 | Friedlin Consortium | GCA_000002725.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/725/GCF_000002725.2_ASM272v2/ | na | na | na | haploid | protozoa | 32,855,089 | 32,855,089 | 59.5 | 36 | 36 | 36 | Friedlin Consortium | Annotation submitted by Friedlin Consortium | 2017-06-18 | 9,388 | 8,316 | 976 | 16020728;22038252 |
GCF_000002765.6 | PRJNA148 | SAMN00102897 | na | reference genome | 36,329 | 5,833 | Plasmodium falciparum 3D7 | na | 3D7 | latest | Complete Genome | Minor | Full | 2016-04-07 | GCA_000002765 | Plasmodium falciparum Genome Sequencing Consortium | GCA_000002765.3 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/765/GCF_000002765.6_GCA_000002765/ | na | na | na | haploid | protozoa | 23,292,622 | 23,292,622 | 19.5 | 14 | 14 | 14 | Plasmodium falciparum Genome Sequencing Consortium | Annotation submitted by Plasmodium falciparum Genome Sequencing Consortium | 2020-09-10 | 5,615 | 5,282 | 175 | 9804551;10448855;12368864;12368867 |
GCF_000002775.5 | PRJNA17973 | SAMN02953657 | AARH00000000.4 | reference genome | 3,694 | 3,694 | Populus trichocarpa | na | Nisqually-1 | latest | Chromosome | Major | Full | 2022-10-20 | P.trichocarpa_v4.1 | US DOE Joint Genome Institute (JGI | GCA_000002775.4 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/775/GCF_000002775.5_P.trichocarpa_v4.1/ | na | na | na | haploid | plant | 392,162,179 | 391,572,179 | 34 | 19 | 105 | 105 | NCBI RefSeq | NCBI Populus trichocarpa Annotation Release 102 | 2022-12-02 | 34,621 | 29,617 | 3,632 | 16973872 |
GCF_000002845.2 | PRJNA19185 | SAMEA2272271 | CADA00000000.1 | reference genome | 420,245 | 5,660 | Leishmania braziliensis MHOM/BR/75/M2904 | strain=MHOM/BR/75/M2904 | na | latest | Chromosome | Major | Full | 2011-11-07 | ASM284v2 | The Sanger Institute | GCA_000002845.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/845/GCF_000002845.2_ASM284v2/ | na | na | na | haploid | protozoa | 32,068,771 | 31,987,066 | 58 | 35 | 138 | 955 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2015-07-09 | 8,463 | 8,160 | 101 | 17572675;22038252 |
GCF_000002855.4 | PRJNA19263 | SAMEA3283178 | na | reference genome | 5,061 | 5,061 | Aspergillus niger | na | na | latest | Scaffold | Major | Full | 2007-04-11 | ASM285v2 | DSM, The Netherlands | GCA_000002855.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/855/GCF_000002855.4_ASM285v2/ | na | na | na | haploid | fungi | 33,975,768 | 33,930,600 | 50.5 | 8 | 19 | 469 | DSM, The Netherlands | Annotation submitted by DSM, The Netherlands | 2025-02-21 | 14,404 | 14,058 | 329 | na |
GCF_000002865.3 | PRJNA28133 | SAMN02953695 | ABFJ00000000.1 | reference genome | 431,895 | 81,824 | Monosiga brevicollis MX1 | strain=MX1 | na | latest | Scaffold | Minor | Full | 2007-12-20 | V1.0 | DOE Joint Genome Institute | GCA_000002865.1 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/865/GCF_000002865.3_V1.0/ | na | na | na | haploid | protozoa | 41,633,360 | 38,648,938 | 55 | 0 | 218 | 2,143 | DOE Joint Genome Institute | Annotation submitted by DOE Joint Genome Institute | 2022-11-29 | 9,232 | 9,202 | 27 | 12401173;18273011 |
GCF_000002875.2 | PRJNA19187 | SAMEA3138175 | CACT00000000.1 | reference genome | 435,258 | 5,671 | Leishmania infantum JPCM5 | strain=JPCM5 | na | latest | Chromosome | Major | Full | 2011-11-08 | ASM287v2 | The Sanger Institute | GCA_000002875.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/875/GCF_000002875.2_ASM287v2/ | na | na | na | haploid | protozoa | 32,122,061 | 32,102,100 | 59.5 | 36 | 76 | 278 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2015-07-16 | 8,372 | 8,150 | 131 | 17572675;22038252 |
GCF_000002945.2 | PRJNA127 | SAMEA3138176 | na | reference genome | 4,896 | 4,896 | Schizosaccharomyces pombe | strain=972h- | na | latest | Chromosome | Major | Full | 2019-07-23 | ASM294v3 | S. pombe European Sequencing Consortium (EUPOM) | GCA_000002945.3 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/945/GCF_000002945.2_ASM294v3/ | na | na | na | haploid | fungi | 12,571,820 | 12,571,420 | 36 | 3 | 3 | 7 | PomBase | Annotation submitted by PomBase | 2024-08-16 | 12,645 | 5,124 | 7,489 | 2446871;2780299;4046021;6092057;11859360;15811919 |
GCF_000002975.1 | PRJNA210 | SAMEA3865277 | na | na | 55,529 | 55,529 | Guillardia theta | na | na | latest | Chromosome | Major | Partial | 2001-04-26 | ASM297v1 | Institute for Marine Biosciences, Halifax, Canada | GCA_000002975.1 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/975/GCF_000002975.1_ASM297v1/ | partial | na | na | haploid | protozoa | 551,264 | 551,264 | 26.5 | 3 | 3 | 3 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2021-05-24 | 743 | 632 | 103 | 9929392;10618395;11323671 |
GCF_000002985.6 | PRJNA158 | na | na | reference genome | 6,239 | 6,239 | Caenorhabditis elegans | strain=Bristol N2 | na | latest | Complete Genome | Major | Full | 2013-02-07 | WBcel235 | C. elegans Sequencing Consortium | GCA_000002985.3 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/985/GCF_000002985.6_WBcel235/ | na | na | na | haploid | invertebrate | 100,272,607 | 100,272,607 | 35.5 | 6 | 6 | 6 | WormBase | WormBase WS298 | 2025-12-01 | 46,926 | 19,983 | 24,811 | 1551572;2235493;7515499;7937159;9851916 |
GCF_000002995.4 | PRJNA27801 | SAMEA3146321 | CAAKNF000000000.1 | reference genome | 6,279 | 6,279 | Brugia malayi | strain=FR3 | na | latest | Scaffold | Major | Full | 2019-06-02 | B_malayi-4.0 | WormBase group, EBI | GCA_000002995.5 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/995/GCF_000002995.4_B_malayi-4.0/ | na | na | na | haploid | invertebrate | 87,155,713 | 86,878,348 | 28.5 | 0 | 196 | 204 | WormBase group, EBI | Annotation submitted by WormBase group, EBI | 2021-08-17 | 11,688 | 10,905 | 359 | na |
GCF_000003025.6 | PRJNA28993 | SAMN02953785 | AEMK00000000.2 | reference genome | 9,823 | 9,823 | Sus scrofa | breed=Duroc | TJ Tabasco | latest | Chromosome | Major | Full | 2017-02-07 | Sscrofa11.1 | The Swine Genome Sequencing Consortium (SGSC) | GCA_000003025.6 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/025/GCF_000003025.6_Sscrofa11.1/ | na | na | na | haploid | vertebrate_mammalian | 2,501,895,775 | 2,472,031,134 | 42 | 20 | 705 | 1,117 | NCBI RefSeq | NCBI Sus scrofa Annotation Release 106 | 2017-05-03 | 30,371 | 20,666 | 6,484 | 10433971;32543654 |
GCF_000003125.1 | PRJNA38857 | SAMN02953686 | ABAS00000000.1 | reference genome | 441,959 | 28,564 | Talaromyces stipitatus ATCC 10500 | strain=ATCC 10500 | na | latest | Scaffold | Major | Full | 2008-12-22 | JCVI-TSTA1-3.0 | J. Craig Venter Institute | GCA_000003125.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/125/GCF_000003125.1_JCVI-TSTA1-3.0/ | na | assembly from type material | na | haploid | fungi | 35,685,443 | 35,558,430 | 46 | 0 | 820 | 960 | J. Craig Venter Institute | Annotation submitted by J. Craig Venter Institute | 2023-11-13 | 12,572 | 12,455 | 104 | 25676766 |
GCF_000003135.1 | PRJNA224116 | SAMN00001475 | ACHI00000000.1 | na | 548,480 | 216,816 | Bifidobacterium longum subsp. longum ATCC 55813 | strain=ATCC 55813 | na | latest | Scaffold | Major | Full | 2009-05-05 | ASM313v1 | Baylor College of Medicine | GCA_000003135.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/135/GCF_000003135.1_ASM313v1/ | na | na | na | haploid | bacteria | 2,396,359 | 2,372,858 | 60.5 | 1 | 114 | 140 | NCBI RefSeq | GCF_000003135.1-RS_2025_07_24 | 2025-07-24 | 2,052 | 1,923 | 64 | na |
GCF_000003195.3 | PRJNA38691 | SAMN02953738 | ABXC00000000.3 | reference genome | 4,558 | 4,558 | Sorghum bicolor | cultivar=BTx623 | na | latest | Chromosome | Major | Full | 2017-04-07 | Sorghum_bicolor_NCBIv3 | Sorghum Consortium | GCA_000003195.3 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/195/GCF_000003195.3_Sorghum_bicolor_NCBIv3/ | na | na | na | haploid | plant | 708,735,318 | 675,363,888 | 44 | 10 | 867 | 4,773 | NCBI RefSeq | NCBI Sorghum bicolor Annotation Release 101 | 2017-06-02 | 32,945 | 28,236 | 3,461 | 17534593;19189423 |
GCF_000003215.1 | PRJNA224116 | SAMN02470531 | ABFD00000000.2 | na | 455,631 | 1,496 | Clostridioides difficile QCD-66c26 | na | QCD-66c26 | latest | Chromosome | Major | Full | 2009-01-30 | ASM321v1 | McGill University | GCA_000003215.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/215/GCF_000003215.1_ASM321v1/ | na | na | na | haploid | bacteria | 4,127,750 | 4,126,050 | 28.5 | 1 | 15 | 31 | NCBI RefSeq | GCF_000003215.1-RS_2026_02_28 | 2026-02-28 | 3,756 | 3,648 | 54 | na |
GCF_000003225.4 | PRJNA16308 | SAMEA3138180 | na | reference genome | 5,874 | 5,874 | Theileria annulata | strain=Ankara isolate clone C9 | na | latest | Chromosome | Major | Full | 2005-07-29 | ASM322v1 | The Sanger Institute | GCA_000003225.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/225/GCF_000003225.4_ASM322v1/ | na | na | na | haploid | protozoa | 8,352,220 | 8,352,020 | 32.5 | 4 | 7 | 9 | The Sanger Institute | Annotation submitted by The Sanger Institute | 2021-02-01 | 3,796 | 3,795 | 0 | 15994557 |
GCF_000003515.1 | PRJNA39807 | SAMN02953631 | AAIW00000000.1 | reference genome | 336,963 | 33,188 | Uncinocarpus reesii 1704 | strain=1704 | na | latest | Scaffold | Major | Full | 2009-05-21 | ASM351v2 | Broad Institute | GCA_000003515.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/515/GCF_000003515.1_ASM351v2/ | na | na | na | haploid | fungi | 22,327,935 | 22,146,268 | 48.5 | 0 | 44 | 582 | Broad Institute | Annotation submitted by Broad Institute | 2023-11-13 | 7,855 | 7,759 | 96 | na |
GCF_000003525.1 | PRJNA319322 | SAMN02953741 | ACBT00000000.1 | reference genome | 559,297 | 5,039 | Blastomyces dermatitidis ER-3 | strain=ER-3 | na | latest | Scaffold | Major | Full | 2009-02-24 | BD_ER3_V1 | Broad Institute | GCA_000003525.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/525/GCF_000003525.1_BD_ER3_V1/ | na | na | na | haploid | fungi | 66,568,269 | 66,230,255 | 37 | 0 | 25 | 591 | Broad Institute | Annotation submitted by Broad Institute | 2022-04-19 | 10,080 | 9,754 | 132 | na |
GCF_000003605.3 | PRJNA42857 | SAMN00102747 | ACQM00000000.1 | reference genome | 10,224 | 10,224 | Saccoglossus kowalevskii | na | na | latest | Scaffold | Minor | Full | 2009-09-09 | Skow_1.2 | Baylor College of Medicine | GCA_000003605.2 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/605/GCF_000003605.3_Skow_1.2/ | na | na | na | haploid | invertebrate | 775,049,609 | 642,076,022 | 36 | 0 | 53,954 | 135,537 | NCBI RefSeq | GCF_000003605.3-RS_2025_12 | 2025-12-05 | 42,155 | 22,356 | 11,661 | na |
GCF_000003815.2 | PRJNA33245 | SAMN02953694 | ABEP00000000.3 | reference genome | 7,739 | 7,739 | Branchiostoma floridae | strain=S238N-H82 | na | latest | Chromosome | Major | Full | 2020-04-29 | Bfl_VNyyK | DOE Joint Genome Institute | GCA_000003815.2 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/815/GCF_000003815.2_Bfl_VNyyK/ | na | na | na | haploid | invertebrate | 513,445,848 | 487,113,852 | 41.5 | 19 | 431 | 22,995 | NCBI RefSeq | NCBI Branchiostoma floridae Annotation Release 100 | 2020-08-11 | 29,857 | 26,689 | 3,042 | 9252184;10331267;12064241;18563158;32313176 |
GCF_000003855.2 | PRJNA41099 | SAMN02953742 | ACBU00000000.1 | reference genome | 559,298 | 1,681,229 | Blastomyces gilchristii SLH14081 | strain=SLH14081 | na | latest | Scaffold | Minor | Full | 2009-02-24 | BD_SLH14081_V1 | Broad Institute | GCA_000003855.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/855/GCF_000003855.2_BD_SLH14081_V1/ | na | na | na | haploid | fungi | 75,353,942 | 74,342,981 | 36 | 0 | 100 | 1,791 | Broad Institute | Annotation submitted by Broad Institute | 2019-11-27 | 10,148 | 9,692 | 150 | na |
GCF_000003925.1 | PRJNA224116 | SAMN00727646 | ACMU00000000.1 | na | 526,997 | 1,405 | Bacillus mycoides DSM 2048 | strain=DSM 2048 | na | latest | Chromosome | Major | Full | 2009-05-29 | ASM392v1 | Naval Medical Research Center | GCA_000003925.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/003/925/GCF_000003925.1_ASM392v1/ | na | assembly from type material | na | haploid | bacteria | 5,561,906 | 5,541,906 | 35 | 1 | 1 | 200 | NCBI RefSeq | GCF_000003925.1-RS_2026_03_24 | 2026-03-24 | 5,853 | 5,399 | 94 | 22645259 |
GCF_000004075.3 | PRJNA182750 | SAMN02953750 | ACHR00000000.3 | reference genome | 3,659 | 3,659 | Cucumis sativus | cultivar=9930 | na | latest | Chromosome | Major | Full | 2019-11-15 | Cucumber_9930_V3 | The Cucumber Genome Initiative | GCA_000004075.3 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/075/GCF_000004075.3_Cucumber_9930_V3/ | na | na | na | haploid | plant | 224,801,081 | 224,764,911 | 32.5 | 7 | 84 | 173 | NCBI RefSeq | NCBI Cucumis sativus Annotation Release 102 | 2019-12-10 | 23,999 | 20,040 | 3,589 | 17607527;19495411;19881527;20565788;21742987;22047402;31216035 |
GCF_000004155.1 | PRJNA264109 | SAMN02953762 | ACQJ00000000.2 | reference genome | 653,667 | 866,546 | Schizosaccharomyces cryophilus OY26 | strain=OY26 | na | latest | Scaffold | Major | Full | 2013-07-31 | SCY4 | Broad Institute | GCA_000004155.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/155/GCF_000004155.1_SCY4/ | na | assembly from type material | na | haploid | fungi | 11,554,764 | 11,523,874 | 37.5 | 0 | 30 | 198 | Broad Institute | Annotation submitted by Broad Institute | 2023-12-29 | 5,494 | 5,155 | 338 | 21511999 |
GCF_000004195.4 | PRJNA205740 | SAMN13041969 | AAMC00000000.4 | reference genome | 8,364 | 8,364 | Xenopus tropicalis | strain=Nigerian | na | latest | Chromosome | Major | Full | 2019-11-14 | UCB_Xtro_10.0 | University of California, Berkeley | GCA_000004195.4 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/195/GCF_000004195.4_UCB_Xtro_10.0/ | na | na | na | haploid | vertebrate_other | 1,451,283,599 | 1,448,444,368 | 40.5 | 10 | 166 | 850 | NCBI RefSeq | NCBI Xenopus tropicalis Annotation Release 104 | 2019-12-06 | 28,858 | 21,826 | 6,388 | 20431018 |
GCF_000004255.2 | PRJNA49545 | SAMN02981250 | ADBK00000000.1 | reference genome | 81,972 | 59,689 | Arabidopsis lyrata subsp. lyrata | na | na | latest | Scaffold | Minor | Full | 2016-11-26 | v.1.0 | US DOE Joint Genome Institute (JGI-PGF) | GCA_000004255.1 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/255/GCF_000004255.2_v.1.0/ | genome length too small | na | na | haploid | plant | 206,667,935 | 183,707,801 | 36 | 0 | 695 | 3,645 | NCBI RefSeq | NCBI Arabidopsis lyrata subsp. lyrata Annotation Release 101 | 2017-05-02 | 34,365 | 29,817 | 3,116 | na |
GCF_000004515.6 | PRJNA48389 | SAMN00002965 | ACUP00000000.4 | reference genome | 3,847 | 3,847 | Glycine max | cultivar=Williams 82 | na | latest | Chromosome | Major | Full | 2021-03-10 | Glycine_max_v4.0 | US DOE Joint Genome Institute (JGI-PGF) | GCA_000004515.5 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/515/GCF_000004515.6_Glycine_max_v4.0/ | na | na | na | haploid | plant | 978,386,919 | 952,478,023 | 34.5 | 20 | 345 | 9,197 | NCBI RefSeq | GCF_000004515.6-RS_2025_01 | 2025-01-28 | 59,048 | 47,068 | 7,219 | 16247559;20075913;23431381 |
GCF_000004555.2 | PRJNA20855 | SAMEA3138181 | CAAC00000000.3 | reference genome | 6,238 | 6,238 | Caenorhabditis briggsae | strain=AF16 | na | latest | Chromosome | Major | Full | 2014-07-02 | CB4 | The C.briggsae Sequencing Consortium | GCA_000004555.3 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/555/GCF_000004555.2_CB4/ | na | na | na | haploid | invertebrate | 108,384,165 | 105,418,679 | 37.5 | 6 | 638 | 5,074 | The C.briggsae Sequencing Consortium | Annotation submitted by The C.briggsae Sequencing Consortium | 2021-12-10 | 22,727 | 21,922 | 805 | 14624247 |
GCF_000004695.1 | PRJNA13925 | SAMN02953606 | AAFI00000000.2 | reference genome | 352,472 | 44,689 | Dictyostelium discoideum AX4 | strain=AX4 | na | latest | Chromosome | Major | Full | 2009-08-24 | dicty_2.7 | The Dictyostelium discoideum Sequencing Consortium | GCA_000004695.1 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/695/GCF_000004695.1_dicty_2.7/ | na | na | na | haploid | protozoa | 34,149,409 | 34,126,409 | 22.5 | 7 | 40 | 260 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2023-04-03 | 13,961 | 13,289 | 507 | 9539429;10821186;12097910;15875012 |
GCF_000004825.1 | PRJNA46447 | SAMN02953767 | ADBJ00000000.1 | reference genome | 670,386 | 2,086,695 | Heterostelium album PN500 | strain=PN500 | na | latest | Scaffold | Major | Full | 2010-01-29 | PolPal_Dec2009 | Leibniz Institute for Age Research - Fritz Lipmann Institute | GCA_000004825.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/825/GCF_000004825.1_PolPal_Dec2009/ | na | na | na | haploid | protozoa | 32,970,186 | 32,968,086 | 32 | 1 | 43 | 64 | Leibniz Institute for Age Research - Fritz Lipmann Institute | Annotation submitted by Leibniz Institute for Age Research - Fritz Lipmann Institute | 2025-09-29 | 12,621 | 12,367 | 254 | 21757610 |
GCF_000004985.1 | PRJNA43691 | SAMN02953745 | ACER00000000.1 | reference genome | 5,762 | 5,762 | Naegleria gruberi | strain=NEG-M | na | latest | Scaffold | Major | Full | 2010-01-20 | V1.0 | US DOE Joint Genome Institute (JGI-PGF) | GCA_000004985.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/004/985/GCF_000004985.1_V1.0/ | na | na | na | haploid | protozoa | 40,964,085 | 36,295,316 | 33 | 0 | 784 | 1,977 | US DOE Joint Genome Institute (JGI-PGF) | Annotation submitted by US DOE Joint Genome Institute (JGI-PGF) | 2021-10-07 | 16,620 | 15,709 | 875 | 20211133 |
GCF_000005505.3 | PRJNA74771 | SAMN02981254 | ADDN00000000.3 | reference genome | 15,368 | 15,368 | Brachypodium distachyon | strain=Bd21 | na | latest | Chromosome | Major | Full | 2018-01-24 | Brachypodium_distachyon_v3.0 | JGI-PGF | GCA_000005505.4 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/505/GCF_000005505.3_Brachypodium_distachyon_v3.0/ | na | na | na | haploid | plant | 271,163,419 | 270,739,461 | 46.5 | 5 | 14 | 35 | NCBI RefSeq | NCBI Brachypodium distachyon Annotation Release 103 | 2018-03-16 | 31,335 | 25,535 | 4,463 | 18710514;20148030 |
GCF_000005825.2 | PRJNA224116 | SAMN02603086 | na | na | 398,511 | 79,885 | Alkalihalophilus pseudofirmus OF4 | strain=OF4 | na | latest | Complete Genome | Major | Full | 2010-12-15 | ASM582v2 | Center for Genomic Sciences, Allegheny-Singer Research Institute | GCA_000005825.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/825/GCF_000005825.2_ASM582v2/ | na | na | na | haploid | bacteria | 4,249,248 | 4,249,248 | 40 | 3 | 3 | 3 | NCBI RefSeq | GCF_000005825.2-RS_2026_03_27 | 2026-03-27 | 4,335 | 4,178 | 105 | 21951522 |
GCF_000005845.2 | PRJNA57779 | SAMN02604091 | na | reference genome | 511,145 | 562 | Escherichia coli str. K-12 substr. MG1655 | strain=K-12 substr. MG1655 | na | latest | Complete Genome | Major | Full | 2013-11-03 | ASM584v2 | Univ. Wisconsin | GCA_000005845.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/845/GCF_000005845.2_ASM584v2/ | na | na | na | haploid | bacteria | 4,641,652 | 4,641,652 | 51 | 1 | 1 | 1 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2022-03-09 | 4,651 | 4,290 | 215 | 9278503;16397293;16738553 |
GCF_000006295.1 | PRJNA19807 | SAMN02953682 | AAZO00000000.1 | reference genome | 121,224 | 121,225 | Pediculus humanus corporis | strain=USDA | na | latest | Scaffold | Major | Full | 2007-04-23 | JCVI_LOUSE_1.0 | The human body louse genome consortium | GCA_000006295.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/295/GCF_000006295.1_JCVI_LOUSE_1.0/ | na | na | na | haploid | invertebrate | 110,781,312 | 108,367,462 | 27.5 | 0 | 1,882 | 8,555 | The human body louse genome consortium | Annotation submitted by The human body louse genome consortium | 2024-01-05 | 10,978 | 10,758 | 219 | 20566863 |
GCF_000006335.3 | PRJNA39569 | SAMN02953608 | AAFN00000000.2 | reference genome | 294,747 | 5,482 | Candida tropicalis MYA-3404 | strain=MYA-3404 | na | latest | Scaffold | Minor | Full | 2009-06-18 | ASM633v3 | Broad Institute | GCA_000006335.3 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/335/GCF_000006335.3_ASM633v3/ | na | na | na | haploid | fungi | 14,579,835 | 14,525,295 | 33 | 0 | 23 | 127 | Broad Institute | Annotation submitted by Broad Institute | 2018-04-11 | 6,441 | 6,254 | 186 | 19465905 |
GCF_000006355.2 | PRJNA33651 | SAMEA2272753 | CADCXE000000000.1 | reference genome | 5,851 | 5,850 | Plasmodium knowlesi strain H | strain=H | na | latest | Chromosome | Major | Full | 2020-02-24 | GCA_000006355.2 | Wellcome Trust Sanger Institute | GCA_000006355.3 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/355/GCF_000006355.2_GCA_000006355.2/ | na | na | na | haploid | protozoa | 24,359,384 | 24,348,038 | 38.5 | 14 | 162 | 249 | Wellcome Trust Sanger Institute | Annotation submitted by Wellcome Trust Sanger Institute | 2023-04-03 | 5,464 | 5,324 | 128 | 15901839;18843368 |
GCF_000006405.1 | PRJNA46451 | SAMN02953677 | AAXJ00000000.1 | reference genome | 423,536 | 31,276 | Perkinsus marinus ATCC 50983 | strain=ATCC 50983 | na | latest | Scaffold | Major | Full | 2009-06-12 | JCVI_PMG_1.0 | TIGR | GCA_000006405.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/405/GCF_000006405.1_JCVI_PMG_1.0/ | na | na | na | haploid | protozoa | 86,605,074 | 86,045,674 | 47.5 | 0 | 17,897 | 23,491 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2012-09-12 | 29,475 | 23,474 | 5,999 | na |
GCF_000006425.1 | PRJNA15585 | na | AAEL00000000.1 | reference genome | 353,151 | 237,895 | Cryptosporidium hominis TU502 | strain=TU502 | na | latest | Scaffold | Major | Full | 2004-10-27 | ASM642v1 | Virginia Commonwealth University | GCA_000006425.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/425/GCF_000006425.1_ASM642v1/ | na | na | na | haploid | protozoa | 8,743,570 | 8,743,173 | 31 | 8 | 1,422 | 1,445 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2012-09-13 | 3,955 | 3,885 | 70 | 15510150 |
GCF_000006445.2 | PRJNA12410 | SAMEA3138183 | na | reference genome | 284,592 | 4,959 | Debaryomyces hansenii CBS767 | strain=CBS767 | na | latest | Chromosome | Major | Full | 2008-09-16 | ASM644v2 | Genolevures Consortium | GCA_000006445.2 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/445/GCF_000006445.2_ASM644v2/ | na | assembly from type material | na | haploid | fungi | 12,152,486 | 12,151,761 | 36.5 | 7 | 7 | 14 | Genolevures Consortium | Annotation submitted by Genolevures Consortium | 2021-05-25 | 6,520 | 6,282 | 236 | 15229592;18673395 |
GCF_000006515.1 | PRJNA32283 | SAMN02953683 | AAZY00000000.2 | reference genome | 441,375 | 5,808 | Cryptosporidium muris RN66 | strain=RN66 | na | latest | Scaffold | Major | Full | 2008-07-23 | JCVI-cmg-v1.0 | TIGR | GCA_000006515.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/515/GCF_000006515.1_JCVI_cmg_v1.0/ | na | na | na | haploid | protozoa | 9,245,251 | 9,238,736 | 28.5 | 0 | 84 | 97 | TIGR | Annotation submitted by TIGR | 2023-12-06 | 3,976 | 3,929 | 43 | na |
GCF_000006565.2 | PRJNA32719 | SAMN00255192 | ABPA00000000.2 | reference genome | 508,771 | 5,811 | Toxoplasma gondii ME49 | strain=ME49 | na | latest | Chromosome | Major | Full | 2013-08-02 | TGA4 | J. Craig Venter Institute | GCA_000006565.2 | different | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/565/GCF_000006565.2_TGA4/ | na | na | na | haploid | protozoa | 65,633,124 | 65,430,047 | 52.5 | 14 | 2,276 | 2,507 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2023-04-03 | 8,925 | 8,318 | 607 | na |
GCF_000006605.1 | PRJNA224116 | SAMEA3283089 | na | na | 306,537 | 38,289 | Corynebacterium jeikeium K411 | strain=K411 = NCTC 11915 | na | latest | Complete Genome | Major | Full | 2005-07-04 | ASM660v1 | Bielefeld Univ | GCA_000006605.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/605/GCF_000006605.1_ASM660v1/ | na | na | na | haploid | bacteria | 2,476,822 | 2,476,822 | 61.5 | 2 | 2 | 2 | NCBI RefSeq | GCF_000006605.1-RS_2025_02_16 | 2025-02-16 | 2,195 | 2,076 | 62 | 15968079 |
GCF_000006625.1 | PRJNA224116 | SAMN02604098 | na | na | 273,119 | 134,821 | Ureaplasma parvum serovar 3 str. ATCC 700970 | strain=ATCC 700970 | na | latest | Complete Genome | Major | Full | 2001-03-16 | ASM662v1 | Univ.AL-Birmingham | GCA_000006625.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/625/GCF_000006625.1_ASM662v1/ | na | na | na | haploid | bacteria | 751,719 | 751,719 | 25.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000006625.1-RS_2025_02_25 | 2025-02-25 | 656 | 608 | 39 | 11048724 |
GCF_000006645.1 | PRJNA224116 | SAMN02604093 | na | na | 187,410 | 632 | Yersinia pestis KIM10+ | strain=KIM10+ | na | latest | Complete Genome | Major | Full | 2002-08-06 | ASM664v1 | Univ. Wisconsin | GCA_000006645.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/645/GCF_000006645.1_ASM664v1/ | na | na | na | haploid | bacteria | 4,701,745 | 4,701,745 | 47.5 | 2 | 2 | 2 | NCBI RefSeq | GCF_000006645.1-RS_2025_06_03 | 2025-06-03 | 4,254 | 3,944 | 105 | 9826348;12142430 |
GCF_000006665.1 | PRJNA224116 | SAMN02604092 | na | na | 155,864 | 562 | Escherichia coli O157:H7 str. EDL933 | strain=EDL933 | na | latest | Chromosome | Major | Full | 2004-12-06 | ASM666v1 | Univ. Wisconsin | GCA_000006665.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/665/GCF_000006665.1_ASM666v1/ | na | na | na | haploid | bacteria | 5,620,522 | 5,616,521 | 50.5 | 2 | 2 | 3 | NCBI RefSeq | GCF_000006665.1-RS_2025_04_26 | 2025-04-26 | 5,631 | 5,110 | 130 | 9722640;11206551 |
GCF_000006685.1 | PRJNA224116 | SAMN02603994 | na | reference genome | 243,161 | 83,560 | Chlamydia muridarum str. Nigg | strain=Nigg | na | latest | Complete Genome | Major | Full | 2003-03-28 | ASM668v1 | TIGR | GCA_000006685.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/685/GCF_000006685.1_ASM668v1/ | na | assembly from type material | na | haploid | bacteria | 1,080,451 | 1,080,451 | 40.5 | 2 | 2 | 2 | NCBI RefSeq | GCF_000006685.1-RS_2025_03_27 | 2025-03-27 | 944 | 891 | 46 | 10684935 |
GCF_000006725.1 | PRJNA224116 | SAMN02603773 | na | na | 160,492 | 2,371 | Xylella fastidiosa 9a5c | strain=9a5c | na | latest | Complete Genome | Major | Full | 2005-01-04 | ASM672v1 | Sao Paulo state (Brazil) Consortium | GCA_000006725.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/725/GCF_000006725.1_ASM672v1/ | na | na | na | haploid | bacteria | 2,731,750 | 2,731,750 | 52.5 | 3 | 3 | 3 | NCBI RefSeq | GCF_000006725.1-RS_2025_05_07 | 2025-05-07 | 2,538 | 2,383 | 58 | 10910347 |
GCF_000006745.1 | PRJNA224116 | SAMN02603969 | na | na | 243,277 | 666 | Vibrio cholerae O1 biovar El Tor str. N16961 | strain=N16961 | na | latest | Complete Genome | Major | Full | 2001-09-18 | ASM674v1 | TIGR | GCA_000006745.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/745/GCF_000006745.1_ASM674v1/ | na | na | na | haploid | bacteria | 4,033,464 | 4,033,464 | 47.5 | 2 | 2 | 2 | NCBI RefSeq | GCF_000006745.1-RS_2024_08_23 | 2024-08-23 | 3,711 | 3,485 | 127 | 10952301 |
GCF_000006765.1 | PRJNA57945 | na | na | reference genome | 208,964 | 287 | Pseudomonas aeruginosa PAO1 | strain=PAO1 | na | latest | Complete Genome | Major | Full | 2006-07-24 | ASM676v1 | PathoGenesis Corporation | GCA_000006765.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/765/GCF_000006765.1_ASM676v1/ | na | na | na | haploid | bacteria | 6,264,404 | 6,264,404 | 66.5 | 1 | 1 | 1 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2019-01-24 | 5,697 | 5,572 | 106 | 10984043;12644476;12644477;15608211;15716452;15908409;15995206;16030221;17015649;18978025 |
GCF_000006785.2 | PRJNA224116 | SAMN02604089 | na | na | 160,490 | 1,314 | Streptococcus pyogenes M1 GAS | strain=SF370 | na | latest | Complete Genome | Major | Full | 2015-06-15 | ASM678v2 | Univ. Oklahoma | GCA_000006785.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/785/GCF_000006785.2_ASM678v2/ | na | na | na | haploid | bacteria | 1,852,433 | 1,852,433 | 38.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000006785.2-RS_2025_03_27 | 2025-03-27 | 1,860 | 1,712 | 82 | 11296296;24733896 |
GCF_000006805.1 | PRJNA224116 | SAMN02604216 | na | na | 64,091 | 2,242 | Halobacterium salinarum NRC-1 | strain=NRC-1; ATCC 700922 | na | latest | Complete Genome | Major | Full | 2001-09-27 | ASM680v1 | University of Maryland | GCA_000006805.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/805/GCF_000006805.1_ASM680v1/ | na | na | na | haploid | archaea | 2,571,010 | 2,571,010 | 66 | 3 | 3 | 3 | NCBI RefSeq | GCF_000006805.1-RS_2025_04_07 | 2025-04-07 | 2,759 | 2,647 | 52 | 1398080;1864501;2050644;2552415;3448465;8002589;8335077;8335618;8423144;9847077;11016950 |
GCF_000006825.1 | PRJNA224116 | SAMN02604085 | na | na | 272,843 | 747 | Pasteurella multocida subsp. multocida str. Pm70 | strain=Pm70 | na | latest | Complete Genome | Major | Full | 2001-09-13 | ASM682v1 | Univ. Minnesota | GCA_000006825.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/825/GCF_000006825.1_ASM682v1/ | na | na | na | haploid | bacteria | 2,257,487 | 2,257,487 | 40.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000006825.1-RS_2024_12_16 | 2024-12-16 | 2,111 | 2,026 | 80 | 11248100 |
GCF_000006845.1 | PRJNA224116 | SAMN02604088 | na | na | 242,231 | 485 | Neisseria gonorrhoeae FA 1090 | strain=FA 1090 | na | latest | Complete Genome | Major | Full | 2005-02-15 | ASM684v1 | Univ. Oklahoma | GCA_000006845.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/845/GCF_000006845.1_ASM684v1/ | na | na | na | haploid | bacteria | 2,153,922 | 2,153,922 | 52.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000006845.1-RS_2025_04_10 | 2025-04-10 | 2,250 | 1,929 | 71 | na |
GCF_000006865.1 | PRJNA224116 | SAMN02603339 | na | na | 272,623 | 1,358 | Lactococcus lactis subsp. lactis Il1403 | strain=IL1403 | na | latest | Complete Genome | Major | Full | 2001-09-19 | ASM686v1 | INRA | GCA_000006865.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/865/GCF_000006865.1_ASM686v1/ | na | na | na | haploid | bacteria | 2,365,589 | 2,365,589 | 35.5 | 1 | 1 | 1 | NCBI RefSeq | NCBI Prokaryotic Genome Annotation Pipeline (PGAP) | 2023-11-21 | 2,415 | 2,258 | 86 | 11337471 |
GCF_000006885.1 | PRJNA224116 | SAMN02604002 | na | na | 170,187 | 1,313 | Streptococcus pneumoniae TIGR4 | strain=TIGR4; ATCC BAA-334 | na | latest | Complete Genome | Major | Full | 2008-07-11 | ASM688v1 | TIGR | GCA_000006885.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/885/GCF_000006885.1_ASM688v1/ | na | na | na | haploid | bacteria | 2,160,842 | 2,160,842 | 39.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000006885.1-RS_2025_04_23 | 2025-04-23 | 2,212 | 1,967 | 73 | 11463916 |
GCF_000006905.1 | PRJNA224116 | SAMN02604005 | na | na | 190,650 | 155,892 | Caulobacter vibrioides CB15 | strain=CB15 | na | latest | Complete Genome | Major | Full | 2001-10-15 | ASM690v1 | TIGR | GCA_000006905.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/905/GCF_000006905.1_ASM690v1/ | na | na | na | haploid | bacteria | 4,016,947 | 4,016,947 | 67 | 1 | 1 | 1 | NCBI RefSeq | GCF_000006905.1-RS_2025_04_26 | 2025-04-26 | 4,004 | 3,823 | 61 | 11259647;16829582 |
GCF_000006925.2 | PRJNA62907 | SAMN02603599 | na | reference genome | 198,214 | 623 | Shigella flexneri 2a str. 301 | strain=301 | na | latest | Complete Genome | Major | Full | 2011-08-03 | ASM692v2 | Microbial Genome Center of ChMPH | GCA_000006925.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/925/GCF_000006925.2_ASM692v2/ | na | na | na | haploid | bacteria | 4,828,820 | 4,828,820 | 50.5 | 2 | 2 | 2 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2016-08-24 | 4,788 | 4,313 | 129 | 12384590 |
GCF_000006945.2 | PRJNA57799 | SAMN02604315 | na | reference genome | 99,287 | 28,901 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | strain=LT2 | na | latest | Complete Genome | Major | Full | 2016-01-13 | ASM694v2 | Washington University Genome Sequencing Center | GCA_000006945.2 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/945/GCF_000006945.2_ASM694v2/ | na | assembly from type material | na | haploid | bacteria | 4,951,383 | 4,951,383 | 52 | 2 | 2 | 2 | NCBI RefSeq | Annotation submitted by NCBI RefSeq | 2022-09-08 | 4,717 | 4,554 | 118 | 11677609 |
GCF_000006965.1 | PRJNA224116 | SAMEA3283068 | na | na | 266,834 | 382 | Sinorhizobium meliloti 1021 | strain=1021 | na | latest | Complete Genome | Major | Full | 2001-10-05 | ASM696v1 | MELILO | GCA_000006965.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/965/GCF_000006965.1_ASM696v1/ | na | na | na | haploid | bacteria | 6,691,694 | 6,691,694 | 62 | 3 | 3 | 3 | NCBI RefSeq | GCF_000006965.1-RS_2025_03_27 | 2025-03-27 | 6,355 | 5,988 | 68 | 11481430;11481431;11481432 |
GCF_000006985.1 | PRJNA224116 | SAMN02604006 | na | reference genome | 194,439 | 1,097 | Chlorobaculum tepidum TLS | strain=TLS | na | latest | Complete Genome | Major | Full | 2002-07-02 | ASM698v1 | TIGR | GCA_000006985.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/006/985/GCF_000006985.1_ASM698v1/ | na | assembly from type material | na | haploid | bacteria | 2,154,946 | 2,154,946 | 56.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000006985.1-RS_2024_12_09 | 2024-12-09 | 2,094 | 1,988 | 59 | 12093901 |
GCF_000007005.1 | PRJNA224116 | SAMN02603227 | na | na | 273,057 | 2,287 | Saccharolobus solfataricus P2 | strain=P2 | na | latest | Complete Genome | Major | Full | 2001-10-03 | ASM700v1 | European/Canadian Consortium | GCA_000007005.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/005/GCF_000007005.1_ASM700v1/ | na | na | na | haploid | archaea | 2,992,245 | 2,992,245 | 36 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007005.1-RS_2025_04_01 | 2025-04-01 | 3,222 | 2,859 | 52 | na |
GCF_000007025.1 | PRJNA224116 | SAMN02603141 | na | reference genome | 272,944 | 781 | Rickettsia conorii str. Malish 7 | strain=Malish 7 | na | latest | Complete Genome | Major | Full | 2001-10-03 | ASM702v1 | CNRS | GCA_000007025.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/025/GCF_000007025.1_ASM702v1/ | na | assembly from type material | na | haploid | bacteria | 1,268,755 | 1,268,755 | 32.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007025.1-RS_2025_01_08 | 2025-01-08 | 1,468 | 1,331 | 40 | 11030655;11557893 |
GCF_000007045.1 | PRJNA224116 | SAMN02603218 | na | na | 171,101 | 1,313 | Streptococcus pneumoniae R6 | strain=R6 | na | latest | Complete Genome | Major | Full | 2001-10-03 | ASM704v1 | Eli Lilly and Company | GCA_000007045.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/045/GCF_000007045.1_ASM704v1/ | na | na | na | haploid | bacteria | 2,038,615 | 2,038,615 | 39.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007045.1-RS_2024_11_20 | 2024-11-20 | 2,092 | 1,856 | 73 | 11544234 |
GCF_000007065.1 | PRJNA224116 | SAMN02603290 | na | na | 192,952 | 2,209 | Methanosarcina mazei Go1 | strain=Go1 | na | latest | Complete Genome | Major | Full | 2002-05-28 | ASM706v1 | Gottingen Genomics Laboratory | GCA_000007065.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/065/GCF_000007065.1_ASM706v1/ | na | na | na | haploid | archaea | 4,096,345 | 4,096,345 | 41.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007065.1-RS_2024_10_21 | 2024-10-21 | 3,517 | 3,373 | 68 | 12125824 |
GCF_000007085.1 | PRJNA224116 | SAMN02603009 | na | reference genome | 273,068 | 911,092 | Caldanaerobacter subterraneus subsp. tengcongensis MB4 | strain=MB4 | na | latest | Complete Genome | Major | Full | 2002-05-16 | ASM708v1 | Beijing Center.HGP | GCA_000007085.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/085/GCF_000007085.1_ASM708v1/ | na | assembly from type material | na | haploid | bacteria | 2,689,445 | 2,689,445 | 37.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007085.1-RS_2024_12_09 | 2024-12-09 | 2,728 | 2,548 | 73 | 11997336 |
GCF_000007105.1 | PRJNA224116 | SAMN02603579 | na | na | 264,203 | 542 | Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 | strain=ZM4 | na | latest | Complete Genome | Major | Full | 2010-01-14 | ASM710v1 | Macrogen Inc. | GCA_000007105.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/105/GCF_000007105.1_ASM710v1/ | na | na | na | haploid | bacteria | 2,056,363 | 2,056,363 | 46.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007105.1-RS_2025_04_01 | 2025-04-01 | 1,814 | 1,734 | 63 | 15592456;19816441 |
GCF_000007125.1 | PRJNA224116 | SAMN02603416 | na | reference genome | 224,914 | 29,459 | Brucella melitensis bv. 1 str. 16M | strain=16M | na | latest | Complete Genome | Major | Full | 2001-12-28 | ASM712v1 | Integrated Genomics | GCA_000007125.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/125/GCF_000007125.1_ASM712v1/ | na | assembly from type material | na | haploid | bacteria | 3,294,931 | 3,294,931 | 57 | 2 | 2 | 2 | NCBI RefSeq | GCF_000007125.1-RS_2025_04_15 | 2025-04-15 | 3,234 | 2,941 | 67 | 11756688 |
GCF_000007145.1 | PRJNA224116 | SAMN02603845 | na | na | 190,485 | 339 | Xanthomonas campestris pv. campestris str. ATCC 33913 | strain=ATCC 33913 | na | latest | Complete Genome | Major | Full | 2002-05-28 | ASM714v1 | Sao Paulo state (Brazil) Consortium | GCA_000007145.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/145/GCF_000007145.1_ASM714v1/ | na | assembly from type material | na | haploid | bacteria | 5,076,188 | 5,076,188 | 65 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007145.1-RS_2025_05_06 | 2025-05-06 | 4,429 | 4,135 | 153 | 12024217 |
GCF_000007165.1 | PRJNA224116 | SAMN02603846 | na | na | 1,203,463 | 346 | Xanthomonas citri subsp. citri 306 | strain=306 | na | latest | Complete Genome | Major | Full | 2002-05-29 | ASM716v1 | Sao Paulo state (Brazil) Consortium | GCA_000007165.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/165/GCF_000007165.1_ASM716v1/ | na | na | na | haploid | bacteria | 5,274,174 | 5,274,174 | 64.5 | 3 | 3 | 3 | NCBI RefSeq | GCF_000007165.1-RS_2025_05_06 | 2025-05-06 | 4,564 | 4,271 | 99 | 12024217;15774874 |
GCF_000007185.1 | PRJNA224116 | SAMN02603235 | na | reference genome | 190,192 | 2,320 | Methanopyrus kandleri AV19 | strain=AV19 | na | latest | Complete Genome | Major | Full | 2002-04-09 | ASM718v1 | Fidelity Systems | GCA_000007185.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/185/GCF_000007185.1_ASM718v1/ | na | assembly from type material | na | haploid | archaea | 1,694,969 | 1,694,969 | 61 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007185.1-RS_2024_10_21 | 2024-10-21 | 1,835 | 1,778 | 40 | 11930014 |
GCF_000007205.1 | PRJNA224116 | SAMN02602979 | na | reference genome | 182,082 | 83,558 | Chlamydia pneumoniae TW-183 | strain=TW-183 | na | latest | Complete Genome | Major | Full | 2003-07-25 | ASM720v1 | ALTANA Pharma | GCA_000007205.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/205/GCF_000007205.1_ASM720v1/ | na | assembly from type material | na | haploid | bacteria | 1,225,935 | 1,225,935 | 40.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007205.1-RS_2025_03_28 | 2025-03-28 | 1,093 | 1,039 | 44 | na |
GCF_000007225.1 | PRJNA224116 | SAMN02604075 | na | reference genome | 178,306 | 13,773 | Pyrobaculum aerophilum str. IM2 | strain=IM2 | na | latest | Complete Genome | Major | Full | 2002-01-24 | ASM722v1 | UCLA/CalTech | GCA_000007225.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/225/GCF_000007225.1_ASM722v1/ | na | assembly from type material | na | haploid | archaea | 2,222,430 | 2,222,430 | 51.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007225.1-RS_2024_12_16 | 2024-12-16 | 2,642 | 2,563 | 49 | 11792869 |
GCF_000007245.1 | PRJNA224116 | SAMN02603844 | na | na | 183,190 | 2,371 | Xylella fastidiosa Temecula1 | strain=Temecula1 | na | latest | Complete Genome | Major | Full | 2003-02-03 | ASM724v1 | Sao Paulo state (Brazil) Consortium | GCA_000007245.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/245/GCF_000007245.1_ASM724v1/ | na | na | na | haploid | bacteria | 2,521,148 | 2,521,148 | 52 | 2 | 2 | 2 | NCBI RefSeq | GCF_000007245.1-RS_2025_05_05 | 2025-05-05 | 2,267 | 2,151 | 59 | 12533478 |
GCF_000007265.1 | PRJNA224116 | SAMN02604013 | na | na | 208,435 | 1,311 | Streptococcus agalactiae 2603V/R | strain=2603V/R | na | latest | Complete Genome | Major | Full | 2002-08-29 | ASM726v1 | TIGR | GCA_000007265.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/265/GCF_000007265.1_ASM726v1/ | na | na | na | haploid | bacteria | 2,160,267 | 2,160,267 | 35.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007265.1-RS_2024_11_20 | 2024-11-20 | 2,221 | 2,053 | 104 | 12200547 |
GCF_000007285.1 | PRJNA224116 | SAMN02603495 | na | na | 186,103 | 1,314 | Streptococcus pyogenes MGAS8232 | strain=MGAS8232 | na | latest | Complete Genome | Major | Full | 2002-03-27 | ASM728v1 | Lab of Human Bacterial Pathogenesis | GCA_000007285.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/285/GCF_000007285.1_ASM728v1/ | na | na | na | haploid | bacteria | 1,895,017 | 1,895,017 | 38.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007285.1-RS_2024_12_01 | 2024-12-01 | 1,969 | 1,815 | 89 | 11917108 |
GCF_000007305.1 | PRJNA224116 | SAMN02604284 | na | na | 186,497 | 2,261 | Pyrococcus furiosus DSM 3638 | strain=DSM 3638 | na | latest | Complete Genome | Major | Full | 2002-02-27 | ASM730v1 | Utah Genome Center | GCA_000007305.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/305/GCF_000007305.1_ASM730v1/ | na | assembly from type material | na | haploid | archaea | 1,908,256 | 1,908,256 | 41 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007305.1-RS_2024_10_21 | 2024-10-21 | 2,147 | 2,025 | 68 | 10430560;11115105;11210495 |
GCF_000007345.1 | PRJNA224116 | SAMN03081414 | na | reference genome | 188,937 | 2,214 | Methanosarcina acetivorans C2A | strain=C2A | na | latest | Complete Genome | Major | Full | 2002-04-09 | ASM734v1 | Broad Institute | GCA_000007345.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/345/GCF_000007345.1_ASM734v1/ | na | assembly from type material | na | haploid | archaea | 5,751,492 | 5,751,492 | 42.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007345.1-RS_2024_10_21 | 2024-10-21 | 4,933 | 4,702 | 68 | 11932238 |
GCF_000007365.1 | PRJNA224116 | SAMN02604269 | na | reference genome | 198,804 | 9 | Buchnera aphidicola str. Sg (Schizaphis graminum) | strain=Sg (ex Schizaphis graminum) | na | latest | Complete Genome | Major | Full | 2002-07-02 | ASM736v1 | Uppsala Univ. | GCA_000007365.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/365/GCF_000007365.1_ASM736v1/ | na | assembly from type material | na | haploid | bacteria | 641,454 | 641,454 | 25.5 | 1 | 1 | 1 | NCBI RefSeq | NCBI Prokaryotic Genome Annotation Pipeline (PGAP) | 2023-08-12 | 630 | 568 | 38 | 12089438 |
GCF_000007405.1 | PRJNA224116 | SAMN02604096 | na | na | 198,215 | 623 | Shigella flexneri 2a str. 2457T | strain=2457T | na | latest | Complete Genome | Major | Full | 2003-04-23 | ASM740v1 | Univ. Wisconsin | GCA_000007405.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/405/GCF_000007405.1_ASM740v1/ | na | na | na | haploid | bacteria | 4,599,354 | 4,599,354 | 51 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007405.1-RS_2025_05_29 | 2025-05-29 | 4,638 | 3,834 | 130 | 12704152 |
GCF_000007425.1 | PRJNA224116 | SAMN02603496 | na | na | 198,466 | 1,314 | Streptococcus pyogenes MGAS315 | strain=MGAS315 | na | latest | Complete Genome | Major | Full | 2002-07-19 | ASM742v1 | Lab of Human Bacterial Pathogenesis | GCA_000007425.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/425/GCF_000007425.1_ASM742v1/ | na | na | na | haploid | bacteria | 1,900,521 | 1,900,521 | 38.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007425.1-RS_2025_01_03 | 2025-01-03 | 1,973 | 1,818 | 89 | 12122206 |
GCF_000007445.1 | PRJNA224116 | SAMN02604094 | na | na | 199,310 | 562 | Escherichia coli CFT073 | strain=CFT073 | na | latest | Complete Genome | Major | Full | 2002-12-09 | ASM744v1 | Univ. Wisconsin | GCA_000007445.1 | identical | https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/007/445/GCF_000007445.1_ASM744v1/ | na | na | na | haploid | bacteria | 5,231,428 | 5,231,428 | 50.5 | 1 | 1 | 1 | NCBI RefSeq | GCF_000007445.1-RS_2025_06_09 | 2025-06-09 | 5,109 | 4,684 | 114 | 12471157 |
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