| { | |
| "description": "A comprehensive collection of viral genomes with host and metadata information", | |
| "citation": "", | |
| "homepage": "https://huggingface.co/datasets/hiyata/Virus-Host-Genomes", | |
| "license": "apache-2.0", | |
| "version": "1.0.0", | |
| "features": { | |
| "sequence": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "The complete viral genome sequence" | |
| }, | |
| "accession": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Unique identifier for the viral sequence" | |
| }, | |
| "host": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Isolation from human or non-human host" | |
| }, | |
| "genus": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Taxonomic genus of the virus" | |
| }, | |
| "isolation_date": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Date when the virus was isolated" | |
| }, | |
| "strain_name": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Name of the viral strain" | |
| }, | |
| "location": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Original location where the virus was collected" | |
| }, | |
| "virus_name": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Name of the virus" | |
| }, | |
| "isolation_source": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Source from which the virus was isolated" | |
| }, | |
| "lab_culture": { | |
| "dtype": "bool", | |
| "_type": "Value", | |
| "description": "Whether the virus was cultured in a laboratory" | |
| }, | |
| "wastewater_sewage": { | |
| "dtype": "bool", | |
| "_type": "Value", | |
| "description": "Whether the virus was isolated from wastewater/sewage" | |
| }, | |
| "standardized_host": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Standardized name of the host organism" | |
| }, | |
| "host_category": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Category of the host organism" | |
| }, | |
| "standardized_location": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Standardized location name" | |
| }, | |
| "zoonotic": { | |
| "dtype": "bool", | |
| "_type": "Value", | |
| "description": "Whether the virus is zoonotic" | |
| }, | |
| "processing_method": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Method used to process the sample" | |
| }, | |
| "gemini_annotated": { | |
| "dtype": "bool", | |
| "_type": "Value", | |
| "description": "Whether the sequence was annotated by GEMINI" | |
| }, | |
| "is_segmented": { | |
| "dtype": "bool", | |
| "_type": "Value", | |
| "description": "Whether the virus has a segmented genome" | |
| }, | |
| "segment_label": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Label for genome segment if applicable" | |
| }, | |
| "family": { | |
| "dtype": "string", | |
| "_type": "Value", | |
| "description": "Viral family name" | |
| } | |
| }, | |
| "splits": { | |
| "train": { | |
| "name": "train", | |
| "num_bytes": null, | |
| "num_examples": 51935, | |
| "dataset_name": "viral_genomes" | |
| }, | |
| "test": { | |
| "name": "test", | |
| "num_bytes": null, | |
| "num_examples": 6111, | |
| "dataset_name": "viral_genomes" | |
| } | |
| }, | |
| "indexing": { | |
| "searchable": [ | |
| "accession", | |
| "family", | |
| "virus_name", | |
| "host", | |
| "genus", | |
| "host_category" | |
| ], | |
| "indexed": [ | |
| "accession" | |
| ] | |
| } | |
| } |