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1 Parent(s): a06fdf2

v1.0.0: Updated configuration and metadata

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Files changed (1) hide show
  1. config.json +21 -7
config.json CHANGED
@@ -1,8 +1,9 @@
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  {
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- "description": "Viral Genome Dataset with standardized metadata",
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  "citation": "",
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  "homepage": "https://huggingface.co/datasets/hiyata/Virus-Host-Genomes",
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  "license": "apache-2.0",
 
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  "features": {
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  "sequence": {
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  "dtype": "string",
@@ -50,12 +51,12 @@
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  "description": "Source from which the virus was isolated"
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  },
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  "lab_culture": {
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- "dtype": "string",
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  "_type": "Value",
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  "description": "Whether the virus was cultured in a laboratory"
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  },
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  "wastewater_sewage": {
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- "dtype": "string",
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  "_type": "Value",
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  "description": "Whether the virus was isolated from wastewater/sewage"
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  },
@@ -75,7 +76,7 @@
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  "description": "Standardized location name"
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  },
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  "zoonotic": {
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- "dtype": "string",
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  "_type": "Value",
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  "description": "Whether the virus is zoonotic"
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  },
@@ -85,12 +86,12 @@
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  "description": "Method used to process the sample"
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  },
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  "gemini_annotated": {
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- "dtype": "string",
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  "_type": "Value",
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  "description": "Whether the sequence was annotated by GEMINI"
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  },
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  "is_segmented": {
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- "dtype": "string",
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  "_type": "Value",
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  "description": "Whether the virus has a segmented genome"
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  },
@@ -102,7 +103,7 @@
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  "family": {
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  "dtype": "string",
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  "_type": "Value",
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- "description": "Viral family name extracted from the FASTA filename"
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  }
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  },
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  "splits": {
@@ -118,5 +119,18 @@
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  "num_examples": 6111,
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  "dataset_name": "viral_genomes"
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  }
 
 
 
 
 
 
 
 
 
 
 
 
 
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  }
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  }
 
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  {
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+ "description": "A comprehensive collection of viral genomes with host and metadata information",
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  "citation": "",
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  "homepage": "https://huggingface.co/datasets/hiyata/Virus-Host-Genomes",
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  "license": "apache-2.0",
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+ "version": "1.0.0",
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  "features": {
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  "sequence": {
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  "dtype": "string",
 
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  "description": "Source from which the virus was isolated"
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  },
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  "lab_culture": {
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+ "dtype": "bool",
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  "_type": "Value",
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  "description": "Whether the virus was cultured in a laboratory"
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  },
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  "wastewater_sewage": {
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+ "dtype": "bool",
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  "_type": "Value",
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  "description": "Whether the virus was isolated from wastewater/sewage"
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  },
 
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  "description": "Standardized location name"
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  },
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  "zoonotic": {
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+ "dtype": "bool",
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  "_type": "Value",
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  "description": "Whether the virus is zoonotic"
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  },
 
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  "description": "Method used to process the sample"
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  },
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  "gemini_annotated": {
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+ "dtype": "bool",
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  "_type": "Value",
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  "description": "Whether the sequence was annotated by GEMINI"
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  },
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  "is_segmented": {
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+ "dtype": "bool",
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  "_type": "Value",
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  "description": "Whether the virus has a segmented genome"
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  },
 
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  "family": {
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  "dtype": "string",
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  "_type": "Value",
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+ "description": "Viral family name"
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  }
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  },
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  "splits": {
 
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  "num_examples": 6111,
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  "dataset_name": "viral_genomes"
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  }
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+ },
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+ "indexing": {
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+ "searchable": [
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+ "accession",
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+ "family",
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+ "virus_name",
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+ "host",
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+ "genus",
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+ "host_category"
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+ ],
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+ "indexed": [
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+ "accession"
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+ ]
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  }
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  }