GoDaddy store your passwords in clear and may access your VPS without permission
This needs repeating: there is <i>no way</i> for a VPS provider <i>not</i> to have access to the internals of your VM; it is unrealistic to have such an expectation.<p>It might not be unrealistic to expect them to ask before looking, but if your concern is "one bad apple" then you've already lost.