<p>Where can i find some bacterial RNA-Seq data, e.g. of Escherichia Coli?</p>

<p>I would like to analayse single bacteria&#39;s transcriptome to see which genes get expressed.</p>

I like DNAnexus's search engine for the SRA, where you can make a nice query and drill down to get what you want. You can see any experiment with "Escherichia" in the name that's categorized as whole-transcriptome analysis <a href="http://sra.dnanexus.com/?result_type=Study&show=25&fq%5B%5D=f_st%253A%2522Transcriptome%2520Analysis%2522&q=Escherichia">here</a>.