Dear community,

To 'flatten' a GTF is required for some programs. However, how does one flatten a GTF? There is not too much material online about it.

I had found this python script --written for Python 2.x, I believe-- for DEXSeq: https://github.com/olgabot/rna-seq-diff-exprn/blob/master/scripts/external/dexseq_prepare_annotation.py

However, is there a more rudimentary way?

Mit freundlichen Grüßen,

Kevin
Rsubread::flattenGTF()