<p>We want use different genomic analysis tools like samtools,bcftool,plink etc</p>

<p>Which operating system should we use?</p>

<p>It really doesn&#39;t matter. Linux distributions will often have samtools in their repo., so you don&#39;t need to compile it yourself (of course, that&#39;s simple). Of course if the Unix that you install is one of the BSDs then that&#39;s probably also the case for it (likewise with Mac OS X).</p>
