Hello, sorry if this is a really stupid question but I have been struggling with this for a week or so now.

Basically I carried out a bacterial RNA-seq on 2 conditions in triplicates. After doing some analysis using DESeq2 it is looking like there is no differential expression between the 2 conditions however, is there a way that I can save the normalised count data to a cvs file so that I can check the quality of the replicates?

Thanks
    foo <- counts(object, normalized = TRUE)
    write.csv(foo, file="norm_counts.csv")

where `object` is a `DESeqDataSet` object