Hi everyone,

I'm trying to find the genomic location of a list of sequences in the reference genome.
So if my sequence is 'ACGTACGTAGTCATGC', I want as an output something like this:

    chr1  position of the first nucleotide   position of the last nucleotide

Are there any tools to do this? Blastn maybe? But since I have the reference genome locally installed, there might be some other options?
<p>If you only need exact matches, then give one of the answers in this thread a try: https://www.biostars.org/p/66752/</p>
