How to get the statistics of all the available bacterial genomes that were sequenced. I need a list of bacterial genomes sequenced from India.

Can anyone help me out with this issue.

Thanks 

 
This is one answer. It is likely not complete/comprehensive but should provide a start. I will leave it to you yo get the actual list of genomes from the file below.

Download prokaryotic genomes report file [from NCBI here][1].<br>

You can look at the `Center` field in that file to get a summary of places submitting these genomes. <br>Note: There is some redundancy because of lower/upper case letters, style of address.

    $ awk -F '\t' '{print $17}' prokaryotes.txt  | sort | uniq -c | wc -l
    6096

These are the Indian institutes along with the number of genomes attributed to them.

    219 Bacterial Genomics and Evolution Laboratory, CSIR-Institute of Microbial Technology, Sector 39-A, Chandigarh, India
      1 Central India Institute of Medical Sciences
      2 CSIR - Indian Institute of Toxicology Research
      1 CSIR-Indian Institute of Toxicology Research
      2 CSIR-North East Institute of Science and Technology, Jorhat-785006, Assam,India
      1 Department of Fisheries Microbiology, Karnataka Veterinary, Animal and Fisheries Sciences University, College of Fisheries, Kankanady, Mangalore, Karnataka 575002, India
      1 Department of Life Sciences, Mumbai University, Mumbai, India
      1 Department of Plant Sciences, School of Life Sciences, Central University P.O., University of Hyderabad, Hyderabad 500046, India
      4 Department of Veterinary Microbiology, College of Veterinary Science and Animal Husbandry, Anand Agricultural University, Anand, Gujarat, India
     17 Directorate of Groundnut Research (Indian Council of Agricultural Research)
      6 Dr. G.M. Taori, Central India Institute of Medical Sciences
      1 Eurofins Genomics India Pvt ltd 
      1 Eurofins Genomics India Pvt Ltd.
      2 ICAR-Indian Agricultural Research Institute, New Delhi
      2 ICAR-Indian Grassland and Fodder Research Institute
      2 Indian Agricultural Research Institute
      3 Indian Agricultural Research Institute, New Delhi
      1 Indian Institute of Chemical Biology
     11 Indian Institute Of Chemical biology
      1 Indian Institute of Horticultural Research
      6 Indian Institute of Science
      3 Indian Institute of Science Education and Research, Bhopal
      1 Indian Institute of Technology
      1 Indian Institute of Technology Bombay
      1 Indian Institute of Technology, Bombay
      1 Indian Institute of Technology Delhi
      2 Indian Institute of Technology Kanpur
      6 Indian Institute of Technology Kharagpur
      1 Indian Institute of Technology Mandi
      1 Indian Institute of Technology, Mandi, HP, India
      1 Indian Oil Corporation Lmt, Faridabad
      1 Institute of Microbial Technology (CSIR), Chandigarh, India
      1 Institute of Microbial Technology (CSIR), Sector 39A, Chandigarh-160036, India
      1 Institute of Microbial Technology(IMTECH), Chandigarh, India
      2 Institute of Microbial Technology(IMTECH),Chandigarh,India
     10 Institute of Microbial Technology (IMTECH), Chandigarh, India 160036
      1 International Centre for Genetic Engineering and Biotechnology, New Delhi, India
      1 JNT University Hyderabad, India
      1 MACS Agharkar Research Institute, Pune (MS) India
      4 National Centre for Cell Science, Pune - 411007, India
      2 National Institute of Tuberculosis Research, Chennai, India
      1 School of Environmental Studies, Jadavpur University, Kolkata 700032, India
      6 Serum Institute of India
      1 University of Hyderabad, India
      2 Yenepoya University, Mangalore, India
  [1]: ftp://ftp.ncbi.nlm.nih.gov/genomes/GENOME_REPORTS/prokaryotes.txt
