Hi all,

I'm trying to run CNVkit (from source, in linux) after following the [installation instructions][1] on the [github page][2] but running into import errors which seem to be rare as I couldn't find any references online:

    Traceback (most recent call last):
      File "cnvkit.py", line 8, in <module>
        from cnvlib import commands
      File "/home/alon/Desktop/BioinformaticsPrograms/cnvkit/cnvlib/__init__.py", line 4, in <module>
        from .cmdutil import read_cna as read
      File "/home/alon/Desktop/BioinformaticsPrograms/cnvkit/cnvlib/cmdutil.py", line 9, in <module>
        from .cnary import CopyNumArray as CNA
      File "/home/alon/Desktop/BioinformaticsPrograms/cnvkit/cnvlib/cnary.py", line 14, in <module>
        from .segmetrics import segment_mean
    ImportError: No module named segmetrics

Will greatly appreciate any help!

Alon

  [1]: https://github.com/etal/cnvkit#from-source
  [2]: https://github.com/etal/cnvkit
This is fixed now. Sorry for the trouble, I forgot to check in a new file while refactoring.