<p>Hi!</p>

<p>I'm trying to get SomaticSniper to run on Ubuntu 10.04 and I've been following the instruction from the website below:</p>

<p><a href='http://gmt.genome.wustl.edu/somatic-sniper/1.0.2/install.html'>http://gmt.genome.wustl.edu/somatic-sniper/1.0.2/install.html</a></p>

<p>However, when I run the command:</p>

<p>sudo apt-get update</p>

<p>I encounter three errors (at the end of the post) along with several successfull hits. Looks like the address <a href='http://repo.gsc.wustl.edu'>http://repo.gsc.wustl.edu</a> is not accessible. I would be greatfull for advise on how to make the installation work.</p>

<hr />

<p>W: Failed to fetch <a href='http://repo.gsc.wustl.edu/ubuntu/dists/lucid-genome-development/Release.gpg'>http://repo.gsc.wustl.edu/ubuntu/dists/lucid-genome-development/Release.gpg</a>  Something wicked happened resolving 'repo.gsc.wustl.edu:http' (-5 - No address associated with hostname)</p>

<p>W: Failed to fetch <a href='http://repo.gsc.wustl.edu/ubuntu/dists/lucid-genome-development/main/binary-i386/Packages.gz'>http://repo.gsc.wustl.edu/ubuntu/dists/lucid-genome-development/main/binary-i386/Packages.gz</a>  Something wicked happened resolving 'repo.gsc.wustl.edu:http' (-5 - No address associated with hostname)</p>

<p>W: Failed to fetch <a href='http://repo.gsc.wustl.edu/ubuntu/dists/lucid-genome-development/main/i18n/Translation-en_US.bz2'>http://repo.gsc.wustl.edu/ubuntu/dists/lucid-genome-development/main/i18n/Translation-en_US.bz2</a>  Something wicked happened resolving 'repo.gsc.wustl.edu:http' (-5 - No address associated with hostname)</p>

<hr />

<p>repo.gsc.wustl.edu is our internal, private APT repo. You should be using apt.genome.wustl.edu. <s>Where did you see repo.gsc.wustl.edu? I'd like to fix the issue.</s></p>

<p>Edit: It looks like our install.sh is misconfigured to point to our repo.gsc.wustl.edu instead of apt.genome.wustl.edu. We'll work on getting that fixed but in the mean time you can edit <code>/etc/apt/sources.list.d/genome.list</code> to correct the address. After editing do an <code>apt-get update</code> to refresh your APT caches.</p>

<p>Edit: <code>install.sh</code> has been fixed and deployed.</p>
