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Tasks

mol_und

  • fg-level
    • fg_count.json
      • 100 samples across 38 different functional groups detection
    • ring_count.json
      • 20 samples, 9 types of ring unit
  • scaffold-level
    • Murcko_scaffold.json
      • 40 samples, using MurckoScaffold extraction
    • ring_system_scaffold.json
      • 60 samples, extract ring system as scaffolds
  • SMILES-level
    • equivalence.json
      • 50 samples, each smiles -> mutate -> permutate, mutated smiles differs from original smiles
      • 50 samples, each smiles -> permutate, permutated smiles is same with original smiles

mol_edit

  • add.json
    • 20 samples, covers 10 func groups addition
  • delete.json
    • 20 samples, covers 10 func groups deletion
  • sub.json
    • 60 samples, covers 37 func groups substitution

mol_opt

  • drd.json
    • 100 samples, target-level
  • gsk.json
    • 100 samples, target-level
  • jnk.json
    • 100 samples, target-level
  • logp.json
    • 100 samples, physicochemical-level
  • qed.json
    • 100 samples, physicochemical-level
  • solubility.json
    • 100 samples, physicochemical-level

reaction

  • forward reaction prediction
    • fs.json
      • 100 samples, 100 rxn-cls (each has one sample)
  • (single-step) retrosynthesis prediction
    • retro.json
      • 100 samples, 100 rxn-cls (each has one sample)
  • reaction condition prediction/recommendation
    • rcr.json
      • 90 samples. 10 types of reaction. Each type has 3 samples for 'Catalyst' prediction, 3 for 'Reagent' prediction and 3 for 'Solvent' prediction
  • Next elementary step product prediction (NEPP)
    • nepp.json
      • given former elementary steps description, predict next elementary step's product.
      • 85 rxn cls, each has 1 sample
  • Mechanism Route Selection (MechSel)
    • mechsel.json
      • 100 samples

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