﻿Administrator Guide {#admin_guide}
====================



# Installation

See the [Installation guide](installation.md).


# Server Configuration


See the [Server Configuration guide](server_configuration.md).

# General %Service Configuration

Various aspects of how a service is presented to a user such as the display name of the parameters, default values, *etc.* can be adjusted by changing the service's configuration details on the Grassroots server. 
These are explained in the [Service Configuration guide](service_configuration.md)

# Services

As well as these general configuration options, each service can have a number of service-specific configuration details that can be set by a server administrator. 
The services with extra configuration options are listed [below](#specific_services_configuration)


# Linking %Services

[Linked Services](linked_services.md) are when the output of running a %Service can be used to either fully or partially fill in the parameters of one or more other Services ready to be run by a user. The service-specific details for the linking of Services are listed below.

# Specific Services Configuration {#specific_services_configuration}

Links for the configuration for the following services are listed below:

 * [BLAST services](blast_service.md)
 * [SamTools service](samtools_service.md)
