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## Overview
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This repository provides a modified Hugging Face `datasets` loading script for MEDLINE/PubMed data. It is designed to download and parse PubMed baseline XML files, with specific enhancements for **extracting the complete text from structured abstracts**.
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This script is based on the original NCBI PubMed dataset loader from Hugging Face and includes modifications by **Hoang Ha (LIG)** and abstract parsing enhancements was adapted for the **[NanoBubble Project](https://nanobubbles.hypotheses.org/)** contributed by **Tiziri Terkmani (Research Engineer, LIG, Team SIGMA)**.
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## Key Features
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- Parses PubMed baseline XML files (`.xml.gz`).
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## Overview
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This repository provides a modified Hugging Face `datasets` loading script for MEDLINE/PubMed data. It is designed to download and parse PubMed baseline XML files, with specific enhancements for **extracting the complete text from structured abstracts**.
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This script is based on the original NCBI PubMed dataset loader from Hugging Face and includes modifications by **[Hoang Ha (LIG)](https://www.linkedin.com/in/hoanghavn/)** and abstract parsing enhancements was adapted for the **[NanoBubble Project](https://nanobubbles.hypotheses.org/)** contributed by **Tiziri Terkmani (Research Engineer, LIG, Team SIGMA)**.
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## Key Features
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- Parses PubMed baseline XML files (`.xml.gz`).
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