transformers pytorch bert token-classification BioBERT Diseases NER en dataset:ncbi_disease dataset:BC5CDR-diseases dataset:LitCOVID-pubtator license:apache-2.0 autotrain_compatible endpoints_compatible region:us
---
datasets:
- ncbi_disease
- BC5CDR-diseases
- LitCOVID-pubtator
language:
- en
license: apache-2.0
tags:
- BioBERT
- Diseases
- NER
---
BioBERT model fine-tuned in NER task with BC5CDR-diseases and NCBI-diseases corpus along with selected pubtator annotations from LitCOVID dataset

This was fine-tuned in order to use it in a datummd/bionlp system which is available at: https://github.com/datummd/bionlp
