Question: Is there any software for mac to create this particular 3d histogram: 
![3d histogram](https://i.stack.imgur.com/7UEuH.gif)  

given a matrix of value?

I've tried with Numbers but it doesn't have 3d histograms.

Answer: 
[Mathematica](http://www.wolfram.com/mathematica/) is able to do this.
[R Studio](http://rstudio.org/) (the wonderful IDE for [R](http://cran.r-project.org/bin/macosx/)) can do this. It's the kind of the thing it was meant to do really. Free, open source and, IMO, easier to grasp than Octave (and free, wherease Matlab is most definitely not). You'll likely want the [RGL addon](http://www2.warwick.ac.uk/fac/sci/moac/students/peter_cock/r/3d_bar_chart) to do a 3D plot.

[There's a StackOverflow question that deals with how you go about plotting the 3D histogram in R](https://stackoverflow.com/questions/2405575/how-does-one-plot-a-3d-stacked-histogram-in-r).