Question: Is there any software for mac to create this particular 3d histogram: 
![3d histogram](https://i.stack.imgur.com/7UEuH.gif)  

given a matrix of value?

I've tried with Numbers but it doesn't have 3d histograms.

Answer: 
You can do things like that in [MatLab](http://www.mathworks.com/products/matlab/) or the free clone [Octave](http://www.gnu.org/software/octave/download.html). There's a script [here](http://daily-notes.net/2011/02/17/matlab-3d-histogram-and-surface-plot/).
[LibreOffice](http://libreoffice.org/) (~ [OpenOffice](http://www.openoffice.org/) ~ [NeoOffice](http://www.neooffice.org)) to give some free office applications.