nonzeroexit commited on
Commit
e9f8ebb
·
verified ·
1 Parent(s): 48574c5

Update app.py

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Files changed (1) hide show
  1. app.py +13 -5
app.py CHANGED
@@ -109,18 +109,26 @@ def predictmic(sequence):
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  # Combined Output as Single String
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  def full_prediction(sequence):
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  features = extract_features(sequence)
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- if isinstance(features, str):
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  return features
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  prediction = model.predict(features)[0]
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  probabilities = model.predict_proba(features)[0]
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  amp_result = "Antimicrobial Peptide (AMP)" if prediction == 0 else "Non-AMP"
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  confidence = round(probabilities[0 if prediction == 0 else 1] * 100, 2)
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- mic_values = predictmic(sequence)
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- result = f"Prediction: {amp_result}\nConfidence: {confidence}%\n\nPredicted MIC Values (µM):\n"
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- for organism, mic in mic_values.items():
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- result += f"- {organism}: {mic}\n"
 
 
 
 
 
 
 
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  return result
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  # Gradio Interface (Single Label Output)
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  iface = gr.Interface(
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  fn=full_prediction,
 
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  # Combined Output as Single String
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  def full_prediction(sequence):
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  features = extract_features(sequence)
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+ if isinstance(features, str): # error message returned
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  return features
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  prediction = model.predict(features)[0]
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  probabilities = model.predict_proba(features)[0]
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  amp_result = "Antimicrobial Peptide (AMP)" if prediction == 0 else "Non-AMP"
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  confidence = round(probabilities[0 if prediction == 0 else 1] * 100, 2)
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+
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+ result = f"Prediction: {amp_result}\nConfidence: {confidence}%\n"
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+
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+ if prediction == 0: # only predict MIC if AMP
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+ mic_values = predictmic(sequence)
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+ result += "\nPredicted MIC Values (µM):\n"
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+ for organism, mic in mic_values.items():
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+ result += f"- {organism}: {mic}\n"
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+ else:
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+ result += "\nMIC prediction is not available because sequence is Non-AMP."
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+
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  return result
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+
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  # Gradio Interface (Single Label Output)
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  iface = gr.Interface(
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  fn=full_prediction,