Kévin Yauy commited on
Commit
883337e
·
1 Parent(s): d199b2f

fix(update): update similarity dict to 2024 and remove unavailable similar terms

Browse files
data/resources/{similarity_dict_threshold_80.json → similarity_dict_threshold_80_2024.json} RENAMED
@@ -1,3 +1,3 @@
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  version https://git-lfs.github.com/spec/v1
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- oid sha256:73187c97bb1bf2898d1a85b27ed260e708d195e74f98338b44517bf8537bf076
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- size 38378638
 
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  version https://git-lfs.github.com/spec/v1
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+ oid sha256:8eee4719b73a522ce293714c6ba018fd0e12da806641676adab5db4f9c6390cb
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+ size 38192094
phenogenius_app.py CHANGED
@@ -117,7 +117,7 @@ def load_topic_data():
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  @st.cache_data(hash_funcs={"_json.Scanner": hash}, max_entries=50)
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  def load_similarity_dict():
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- with open("data/resources/similarity_dict_threshold_80.json") as json_data:
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  data_dict = json.load(json_data)
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  return data_dict
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@@ -390,7 +390,8 @@ if submit_button:
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  key="download-csv-proj",
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  )
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- sim_dict, hpo_list_add = get_similar_terms(hpo_list, similarity_terms_dict)
 
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  similar_list = list(set(hpo_list_add) - set(hpo_list))
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  similar_list_desc = get_hpo_name_list(similar_list, hp_onto)
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  @st.cache_data(hash_funcs={"_json.Scanner": hash}, max_entries=50)
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  def load_similarity_dict():
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+ with open("data/resources/similarity_dict_threshold_80_2024.json") as json_data:
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  data_dict = json.load(json_data)
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  return data_dict
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  key="download-csv-proj",
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  )
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+ sim_dict, hpo_list_add_raw = get_similar_terms(hpo_list, similarity_terms_dict)
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+ hpo_list_add = list(set(hpo_list_add_raw) & set(data.columns.tolist()))
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  similar_list = list(set(hpo_list_add) - set(hpo_list))
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  similar_list_desc = get_hpo_name_list(similar_list, hp_onto)
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