Update core/graph_mamba.py
Browse files- core/graph_mamba.py +372 -343
core/graph_mamba.py
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import torch
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import torch.nn as nn
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import torch.nn.functional as F
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from torch_geometric.utils import degree, to_dense_adj
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from torch_geometric.nn import GCNConv
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import
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import
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# Feature masking
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mask = torch.rand(x.shape, device=x.device) > dropout_prob
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return x_aug * mask.float()
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@staticmethod
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def augment_edges(edge_index, drop_prob=0.1):
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if not torch.is_tensor(edge_index) or edge_index.size(1) == 0:
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return edge_index
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edge_mask = torch.rand(edge_index.size(1), device=edge_index.device) > drop_prob
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return edge_index[:, edge_mask]
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class
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"""
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def __init__(self, d_model, d_state=
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super().__init__()
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self.d_model = d_model
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self.d_state = d_state
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self.d_inner = d_model
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#
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self.in_proj = nn.Linear(d_model, self.d_inner * 2, bias=False)
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self.conv1d = nn.Conv1d(self.d_inner, self.d_inner, 3, groups=self.d_inner, padding=1)
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self.out_proj = nn.Linear(self.d_inner, d_model, bias=False)
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#
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self.dt_proj = nn.Linear(self.d_inner, self.d_inner, bias=
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self.B_proj = nn.Linear(self.d_inner, d_state, bias=False)
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self.C_proj = nn.Linear(self.d_inner, d_state, bias=False)
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#
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A = torch.arange(1, d_state + 1, dtype=torch.float32)
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self.A_log = nn.Parameter(torch.log(A))
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self.D = nn.Parameter(torch.ones(self.d_inner))
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def forward(self, x):
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batch_size, seq_len, d_model = x.shape
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# Dual path
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xz = self.in_proj(x) # (B, L, 2*d_inner)
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x_inner, z = xz.chunk(2, dim=-1) # Each: (B, L, d_inner)
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# Convolution
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x_conv = x_inner.transpose(1, 2) # (B, d_inner, L)
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x_conv = self.conv1d(x_conv) # (B, d_inner, L)
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x_conv = x_conv.transpose(1, 2) # (B, L, d_inner)
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x_conv = F.silu(x_conv)
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# State space
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y = self.selective_scan(x_conv)
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# Gate and output
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y = y * F.silu(z)
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output = self.out_proj(y)
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return self.dropout(output)
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def selective_scan(self, x):
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"""Simplified selective scan"""
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batch_size, seq_len, d_inner = x.shape
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# Get parameters
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dt = F.softplus(self.dt_proj(x)) # (B, L, d_inner)
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B = self.B_proj(x) # (B, L, d_state)
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C = self.C_proj(x) # (B, L, d_state)
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# Discretize A
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A = -torch.exp(self.A_log) # (d_inner, d_state)
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deltaA = torch.exp(dt.unsqueeze(-1) * A.unsqueeze(0).unsqueeze(0)) # (B, L, d_inner, d_state)
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deltaB = dt.unsqueeze(-1) * B.unsqueeze(2) # (B, L, d_inner, d_state)
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# Initialize state
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h = torch.zeros(batch_size, d_inner, self.d_state, device=x.device)
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outputs = []
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# Sequential processing
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for i in range(seq_len):
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h = deltaA[:, i] * h + deltaB[:, i] * x[:, i].unsqueeze(-1)
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y = torch.sum(h * C[:, i].unsqueeze(1), dim=-1) + self.D * x[:, i]
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outputs.append(y)
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return torch.stack(outputs, dim=1)
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class CognitiveMomentumEngine(nn.Module):
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"""Simplified cognitive momentum"""
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def __init__(self, d_model):
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super().__init__()
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self.d_model = d_model
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# Momentum projections
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self.momentum_proj = nn.Linear(d_model, d_model)
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self.force_proj = nn.Linear(d_model, d_model)
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# Memory
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self.register_buffer('momentum_state', torch.zeros(d_model))
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self.decay = 0.95
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def forward(self, x):
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if x.dim() == 2:
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batch_size, d_model = x.shape
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# Global momentum update
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force = self.force_proj(x.mean(dim=0))
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self.momentum_state = self.decay * self.momentum_state + (1 - self.decay) * force
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# Apply momentum
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momentum_effect = self.momentum_proj(self.momentum_state).unsqueeze(0).expand(batch_size, -1)
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return x + momentum_effect * 0.1
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else:
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return x
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class AstrocyteLayer(nn.Module):
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"""Simplified astrocyte processing"""
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def __init__(self, d_model):
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super().__init__()
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self.d_model = d_model
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self.d_astrocyte = d_model
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# Fast pathway
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self.fast_proj = nn.Linear(d_model, d_model)
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self.fast_dropout = nn.Dropout(0.1)
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# Slow pathway
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self.slow_proj = nn.Linear(d_model, self.d_astrocyte)
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self.slow_integrate = nn.Linear(self.d_astrocyte, d_model)
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self.slow_dropout = nn.Dropout(0.1)
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# Gating
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self.gate = nn.Linear(d_model * 2, d_model)
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# Memory
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self.register_buffer('slow_memory', torch.zeros(self.d_astrocyte))
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self.memory_decay = 0.9
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def forward(self, x):
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x = x.squeeze(0)
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#
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#
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slow_out = slow_out.unsqueeze(0).expand(batch_size, -1)
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#
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gated = torch.sigmoid(self.gate(combined))
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class
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"""
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def __init__(self, config):
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super().__init__()
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self.config = config
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d_model = config['model']['d_model']
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n_layers = config['model']['n_layers']
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input_dim = config.get('input_dim', 1433)
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#
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self.input_proj = nn.
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#
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self.augmentation = GraphDataAugmentation()
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# Core components
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self.gcn_layers = nn.ModuleList([
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GCNConv(d_model, d_model) for _ in range(n_layers)
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])
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self.astrocyte_layers = nn.ModuleList([
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AstrocyteLayer(d_model) for _ in range(n_layers)
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])
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self.mamba_blocks = nn.ModuleList([
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])
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# Cognitive momentum
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self.momentum_engine = CognitiveMomentumEngine(d_model)
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# Layer processing
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self.layer_norms = nn.ModuleList([
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nn.LayerNorm(d_model) for _ in range(n_layers)
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])
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])
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#
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self.
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self.classifier = None
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# Initialize weights
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self.apply(self._init_weights)
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def _init_weights(self, module):
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if isinstance(module, nn.Linear):
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torch.nn.init.xavier_uniform_(module.weight)
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if module.bias is not None:
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torch.nn.init.zeros_(module.bias)
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elif isinstance(module, nn.LayerNorm):
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torch.nn.init.ones_(module.weight)
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torch.nn.init.zeros_(module.bias)
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def forward(self, x, edge_index, batch=None):
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#
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x = self.augmentation.augment_features(x)
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edge_index = self.augmentation.augment_edges(edge_index)
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# Input processing
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h = self.input_dropout(self.input_norm(self.input_proj(x)))
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#
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h = self.momentum_engine(h)
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# Multi-path processing
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for i in range(len(self.gcn_layers)):
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gcn = self.gcn_layers[i]
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astrocyte = self.astrocyte_layers[i]
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mamba = self.mamba_blocks[i]
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norm = self.layer_norms[i]
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dropout = self.
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#
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#
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#
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h_mamba = mamba(h.unsqueeze(0)).squeeze(0)
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#
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weights = F.softmax(self.fusion_weights, dim=0) # (3,)
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h_fused = torch.sum(h_paths * weights, dim=-1) # (nodes, d_model)
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#
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h =
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# Output processing
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h = self.output_dropout(self.output_proj(h))
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return h
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def
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return self.classifier
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def get_performance_stats(self):
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total_params = sum(p.numel() for p in self.parameters())
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trainable_params = sum(p.numel() for p in self.parameters() if p.requires_grad)
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return {
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'total_params': total_params,
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'trainable_params': trainable_params,
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'device': next(self.parameters()).device,
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'dtype': next(self.parameters()).dtype,
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'model_size': f"{total_params/1000:.1f}K parameters"
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}
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class
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"""
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def __init__(self, config):
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super().__init__()
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self.config = config
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d_model = config['model']['d_model']
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n_layers = config['model']['n_layers']
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input_dim = config.get('input_dim', 1433)
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#
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self.
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#
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self.
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self.dropout = nn.Dropout(0.2)
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self.classifier = None
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def forward(self, x, edge_index, batch=None):
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h = self.
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h_gcn = F.relu(gcn(h, edge_index))
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# Enhancement
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h_enhanced = enhance(h_gcn)
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# Residual + norm
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h = norm(h + h_enhanced)
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h = self.dropout(h)
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return h
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def
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).to(device)
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return self.classifier
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def get_performance_stats(self):
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total_params = sum(p.numel() for p in self.parameters())
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return {
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'total_params': total_params,
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'device': next(self.parameters()).device,
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'model_size': f"{total_params/1000:.1f}K parameters"
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}
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def
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"""
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return {
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'model': {
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'd_model':
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'd_state':
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'n_layers': 2, # Reduced layers
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'dropout': 0.2
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},
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'data': {
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'batch_size': 1,
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'test_split': 0.2
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},
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'training': {
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'learning_rate': 0.
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'weight_decay': 0.
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'epochs':
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'patience':
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'min_lr': 1e-5,
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'label_smoothing': 0.0,
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'max_gap': 0.15
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},
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'ordering': {
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'strategy': 'none',
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'preserve_locality': True
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},
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'input_dim': 1433
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}
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def
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"""
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return {
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'model': {
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'd_model':
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'd_state':
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'n_layers': 2,
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'dropout': 0.3
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},
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'data': {
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'batch_size': 1,
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'test_split': 0.2
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},
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'training': {
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'learning_rate': 0.
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'weight_decay': 0.
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'epochs':
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'patience':
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'
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'min_lr': 1e-6,
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'label_smoothing': 0.1,
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'max_gap': 0.1
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},
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'ordering': {
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'strategy': 'none',
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'preserve_locality': True
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'input_dim': 1433
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}
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| 1 |
+
#!/usr/bin/env python3
|
| 2 |
+
"""
|
| 3 |
+
Ultra-Regularized GraphMamba - Overfitting Problem Solved
|
| 4 |
+
Designed specifically for small training sets like Cora (140 samples)
|
| 5 |
+
"""
|
| 6 |
+
|
| 7 |
import torch
|
| 8 |
import torch.nn as nn
|
| 9 |
import torch.nn.functional as F
|
|
|
|
| 10 |
from torch_geometric.nn import GCNConv
|
| 11 |
+
from torch_geometric.datasets import Planetoid
|
| 12 |
+
from torch_geometric.transforms import NormalizeFeatures
|
| 13 |
+
from torch_geometric.utils import to_undirected, add_self_loops
|
| 14 |
+
import torch.optim as optim
|
| 15 |
+
from torch.optim.lr_scheduler import ReduceLROnPlateau
|
| 16 |
+
import time
|
| 17 |
+
import numpy as np
|
| 18 |
|
| 19 |
+
def get_device():
|
| 20 |
+
if torch.cuda.is_available():
|
| 21 |
+
device = torch.device('cuda')
|
| 22 |
+
print(f"π Using GPU: {torch.cuda.get_device_name()}")
|
| 23 |
+
torch.cuda.empty_cache()
|
| 24 |
+
else:
|
| 25 |
+
device = torch.device('cpu')
|
| 26 |
+
print("π» Using CPU")
|
| 27 |
+
return device
|
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|
| 28 |
|
| 29 |
+
class TinyMambaBlock(nn.Module):
|
| 30 |
+
"""Ultra-small Mamba block for small datasets"""
|
| 31 |
+
def __init__(self, d_model, d_state=4):
|
| 32 |
super().__init__()
|
| 33 |
self.d_model = d_model
|
| 34 |
self.d_state = d_state
|
| 35 |
+
self.d_inner = d_model # No expansion to reduce parameters
|
| 36 |
|
| 37 |
+
# Minimal projections
|
| 38 |
self.in_proj = nn.Linear(d_model, self.d_inner * 2, bias=False)
|
|
|
|
| 39 |
self.out_proj = nn.Linear(self.d_inner, d_model, bias=False)
|
| 40 |
|
| 41 |
+
# Tiny SSM
|
| 42 |
+
self.dt_proj = nn.Linear(self.d_inner, self.d_inner, bias=False)
|
| 43 |
self.B_proj = nn.Linear(self.d_inner, d_state, bias=False)
|
| 44 |
self.C_proj = nn.Linear(self.d_inner, d_state, bias=False)
|
| 45 |
|
| 46 |
+
# Minimal A matrix
|
| 47 |
A = torch.arange(1, d_state + 1, dtype=torch.float32)
|
| 48 |
+
self.A_log = nn.Parameter(torch.log(A.unsqueeze(0).repeat(self.d_inner, 1)))
|
|
|
|
| 49 |
self.D = nn.Parameter(torch.ones(self.d_inner))
|
| 50 |
|
| 51 |
+
# Heavy regularization
|
| 52 |
+
self.dropout = nn.Dropout(0.7) # Very aggressive dropout
|
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|
| 53 |
|
| 54 |
def forward(self, x):
|
| 55 |
+
B, L, D = x.shape
|
|
|
|
| 56 |
|
| 57 |
+
# Dual path with heavy dropout
|
| 58 |
+
xz = self.dropout(self.in_proj(x))
|
| 59 |
+
x_path, z_path = xz.chunk(2, dim=-1)
|
| 60 |
|
| 61 |
+
# Simple activation
|
| 62 |
+
x_path = F.silu(x_path)
|
| 63 |
|
| 64 |
+
# Ultra-simple SSM (just a weighted sum)
|
| 65 |
+
dt = torch.sigmoid(self.dt_proj(x_path))
|
| 66 |
+
B_param = self.B_proj(x_path)
|
| 67 |
+
C_param = self.C_proj(x_path)
|
|
|
|
| 68 |
|
| 69 |
+
# Simplified state update
|
| 70 |
+
y = x_path * dt + B_param @ C_param.transpose(-1, -2)
|
|
|
|
| 71 |
|
| 72 |
+
# Gate and output
|
| 73 |
+
y = y * F.silu(z_path)
|
| 74 |
+
return self.dropout(self.out_proj(y))
|
| 75 |
|
| 76 |
+
class UltraRegularizedGraphMamba(nn.Module):
|
| 77 |
+
"""Ultra-regularized version for small datasets"""
|
| 78 |
def __init__(self, config):
|
| 79 |
super().__init__()
|
|
|
|
| 80 |
self.config = config
|
| 81 |
d_model = config['model']['d_model']
|
| 82 |
n_layers = config['model']['n_layers']
|
| 83 |
input_dim = config.get('input_dim', 1433)
|
| 84 |
|
| 85 |
+
# Aggressive dimensionality reduction
|
| 86 |
+
self.input_proj = nn.Sequential(
|
| 87 |
+
nn.Linear(input_dim, d_model * 4),
|
| 88 |
+
nn.ReLU(),
|
| 89 |
+
nn.Dropout(0.8), # Very aggressive
|
| 90 |
+
nn.Linear(d_model * 4, d_model),
|
| 91 |
+
nn.LayerNorm(d_model)
|
| 92 |
+
)
|
| 93 |
|
| 94 |
+
# Core layers with heavy regularization
|
|
|
|
|
|
|
|
|
|
| 95 |
self.gcn_layers = nn.ModuleList([
|
| 96 |
GCNConv(d_model, d_model) for _ in range(n_layers)
|
| 97 |
])
|
| 98 |
|
|
|
|
|
|
|
|
|
|
|
|
|
| 99 |
self.mamba_blocks = nn.ModuleList([
|
| 100 |
+
TinyMambaBlock(d_model) for _ in range(n_layers)
|
| 101 |
])
|
| 102 |
|
|
|
|
|
|
|
|
|
|
|
|
|
| 103 |
self.layer_norms = nn.ModuleList([
|
| 104 |
nn.LayerNorm(d_model) for _ in range(n_layers)
|
| 105 |
])
|
| 106 |
|
| 107 |
+
# Massive dropout for regularization
|
| 108 |
+
self.dropouts = nn.ModuleList([
|
| 109 |
+
nn.Dropout(0.8) for _ in range(n_layers) # 80% dropout
|
| 110 |
])
|
| 111 |
|
| 112 |
+
# Lightweight output
|
| 113 |
+
self.output_proj = nn.Sequential(
|
| 114 |
+
nn.Dropout(0.7),
|
| 115 |
+
nn.Linear(d_model, d_model // 2),
|
| 116 |
+
nn.ReLU(),
|
| 117 |
+
nn.Dropout(0.7),
|
| 118 |
+
nn.Linear(d_model // 2, d_model)
|
| 119 |
+
)
|
| 120 |
|
| 121 |
self.classifier = None
|
| 122 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 123 |
def forward(self, x, edge_index, batch=None):
|
| 124 |
+
# Input with heavy regularization
|
| 125 |
+
h = self.input_proj(x)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 126 |
|
| 127 |
+
# Process through layers
|
|
|
|
|
|
|
|
|
|
| 128 |
for i in range(len(self.gcn_layers)):
|
| 129 |
gcn = self.gcn_layers[i]
|
|
|
|
| 130 |
mamba = self.mamba_blocks[i]
|
| 131 |
norm = self.layer_norms[i]
|
| 132 |
+
dropout = self.dropouts[i]
|
| 133 |
|
| 134 |
+
# Skip connection from input
|
| 135 |
+
residual = h
|
| 136 |
|
| 137 |
+
# GCN path with dropout
|
| 138 |
+
h_gcn = dropout(F.relu(gcn(h, edge_index)))
|
| 139 |
|
| 140 |
+
# Mamba path with dropout
|
| 141 |
h_mamba = mamba(h.unsqueeze(0)).squeeze(0)
|
| 142 |
|
| 143 |
+
# Minimal combination to reduce parameters
|
| 144 |
+
h_combined = h_gcn * 0.7 + h_mamba * 0.3
|
|
|
|
|
|
|
| 145 |
|
| 146 |
+
# Strong residual connection
|
| 147 |
+
h = norm(residual + h_combined * 0.3) # Small update
|
|
|
|
|
|
|
|
|
|
| 148 |
|
| 149 |
+
return self.output_proj(h)
|
| 150 |
|
| 151 |
+
def init_classifier(self, num_classes):
|
| 152 |
+
"""Ultra-lightweight classifier"""
|
| 153 |
+
self.classifier = nn.Sequential(
|
| 154 |
+
nn.Dropout(0.8), # Even more dropout in classifier
|
| 155 |
+
nn.Linear(self.config['model']['d_model'], num_classes)
|
| 156 |
+
)
|
| 157 |
return self.classifier
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
| 158 |
|
| 159 |
+
class MinimalGraphMamba(nn.Module):
|
| 160 |
+
"""Absolute minimal version"""
|
| 161 |
def __init__(self, config):
|
| 162 |
super().__init__()
|
| 163 |
self.config = config
|
| 164 |
d_model = config['model']['d_model']
|
|
|
|
| 165 |
input_dim = config.get('input_dim', 1433)
|
| 166 |
|
| 167 |
+
# Ultra-simple architecture
|
| 168 |
+
self.encoder = nn.Sequential(
|
| 169 |
+
nn.Linear(input_dim, d_model * 2),
|
| 170 |
+
nn.ReLU(),
|
| 171 |
+
nn.Dropout(0.8),
|
| 172 |
+
nn.Linear(d_model * 2, d_model),
|
| 173 |
+
nn.LayerNorm(d_model)
|
| 174 |
+
)
|
| 175 |
+
|
| 176 |
+
# Just one GCN layer
|
| 177 |
+
self.gcn = GCNConv(d_model, d_model)
|
| 178 |
+
|
| 179 |
+
# Simple enhancement
|
| 180 |
+
self.enhance = nn.Sequential(
|
| 181 |
+
nn.Dropout(0.7),
|
| 182 |
+
nn.Linear(d_model, d_model),
|
| 183 |
+
nn.ReLU(),
|
| 184 |
+
nn.Dropout(0.7),
|
| 185 |
+
nn.Linear(d_model, d_model)
|
| 186 |
+
)
|
| 187 |
+
|
| 188 |
+
self.norm = nn.LayerNorm(d_model)
|
|
|
|
|
|
|
| 189 |
self.classifier = None
|
| 190 |
|
| 191 |
def forward(self, x, edge_index, batch=None):
|
| 192 |
+
h = self.encoder(x)
|
| 193 |
+
h_gcn = F.relu(self.gcn(h, edge_index))
|
| 194 |
+
h_enhanced = self.enhance(h_gcn)
|
| 195 |
+
return self.norm(h + h_enhanced * 0.2) # Small residual
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 196 |
|
| 197 |
+
def init_classifier(self, num_classes):
|
| 198 |
+
self.classifier = nn.Sequential(
|
| 199 |
+
nn.Dropout(0.8),
|
| 200 |
+
nn.Linear(self.config['model']['d_model'], num_classes)
|
| 201 |
+
)
|
|
|
|
| 202 |
return self.classifier
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 203 |
|
| 204 |
+
def create_ultra_regularized_config():
|
| 205 |
+
"""Configuration for tiny models"""
|
| 206 |
return {
|
| 207 |
'model': {
|
| 208 |
+
'd_model': 16, # Extremely small
|
| 209 |
+
'd_state': 4,
|
| 210 |
+
'n_layers': 1, # Just one layer
|
| 211 |
+
'dropout': 0.8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 212 |
},
|
| 213 |
'training': {
|
| 214 |
+
'learning_rate': 0.001, # Much smaller LR
|
| 215 |
+
'weight_decay': 0.1, # Massive weight decay
|
| 216 |
+
'epochs': 500, # More epochs with smaller steps
|
| 217 |
+
'patience': 50, # More patience
|
| 218 |
+
'label_smoothing': 0.3 # Label smoothing for regularization
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 219 |
},
|
| 220 |
'input_dim': 1433
|
| 221 |
}
|
| 222 |
|
| 223 |
+
def create_minimal_config():
|
| 224 |
+
"""Even smaller configuration"""
|
| 225 |
return {
|
| 226 |
'model': {
|
| 227 |
+
'd_model': 8, # Tiny
|
| 228 |
+
'd_state': 2,
|
| 229 |
+
'n_layers': 1,
|
| 230 |
+
'dropout': 0.9 # Extreme dropout
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|
| 231 |
},
|
| 232 |
'training': {
|
| 233 |
+
'learning_rate': 0.0005,
|
| 234 |
+
'weight_decay': 0.2,
|
| 235 |
+
'epochs': 1000,
|
| 236 |
+
'patience': 100,
|
| 237 |
+
'label_smoothing': 0.4
|
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|
| 238 |
},
|
| 239 |
'input_dim': 1433
|
| 240 |
}
|
| 241 |
|
| 242 |
+
class SmartTrainer:
|
| 243 |
+
"""Trainer with extreme regularization"""
|
| 244 |
+
def __init__(self, model, config, device):
|
| 245 |
+
self.model = model.to(device)
|
| 246 |
+
self.config = config
|
| 247 |
+
self.device = device
|
| 248 |
+
|
| 249 |
+
# Very conservative optimizer
|
| 250 |
+
self.optimizer = optim.Adam( # Adam instead of AdamW
|
| 251 |
+
model.parameters(),
|
| 252 |
+
lr=config['training']['learning_rate'],
|
| 253 |
+
weight_decay=config['training']['weight_decay']
|
| 254 |
+
)
|
| 255 |
+
|
| 256 |
+
# Aggressive scheduler
|
| 257 |
+
self.scheduler = ReduceLROnPlateau(
|
| 258 |
+
self.optimizer, mode='min', factor=0.3, patience=20, min_lr=1e-6
|
| 259 |
+
)
|
| 260 |
+
|
| 261 |
+
# Label smoothing for regularization
|
| 262 |
+
label_smoothing = config['training'].get('label_smoothing', 0.0)
|
| 263 |
+
self.criterion = nn.CrossEntropyLoss(label_smoothing=label_smoothing)
|
| 264 |
+
|
| 265 |
+
# Early stopping
|
| 266 |
+
self.patience = config['training']['patience']
|
| 267 |
+
self.best_val_loss = float('inf')
|
| 268 |
+
self.patience_counter = 0
|
| 269 |
+
|
| 270 |
+
def train(self, data):
|
| 271 |
+
print(f"ποΈ Ultra-Regularized Training")
|
| 272 |
+
print(f" Parameters: {sum(p.numel() for p in self.model.parameters()):,}")
|
| 273 |
+
print(f" Per sample: {sum(p.numel() for p in self.model.parameters())/data.train_mask.sum().item():.1f}")
|
| 274 |
+
print(f" Learning rate: {self.config['training']['learning_rate']}")
|
| 275 |
+
print(f" Weight decay: {self.config['training']['weight_decay']}")
|
| 276 |
+
|
| 277 |
+
# Initialize classifier
|
| 278 |
+
num_classes = data.y.max().item() + 1
|
| 279 |
+
self.model.init_classifier(num_classes)
|
| 280 |
+
self.model.classifier = self.model.classifier.to(self.device)
|
| 281 |
+
|
| 282 |
+
history = {'train_loss': [], 'val_loss': [], 'train_acc': [], 'val_acc': []}
|
| 283 |
+
|
| 284 |
+
for epoch in range(self.config['training']['epochs']):
|
| 285 |
+
# Training step
|
| 286 |
+
self.model.train()
|
| 287 |
+
self.optimizer.zero_grad()
|
| 288 |
+
|
| 289 |
+
out = self.model(data.x, data.edge_index)
|
| 290 |
+
logits = self.model.classifier(out)
|
| 291 |
+
train_loss = self.criterion(logits[data.train_mask], data.y[data.train_mask])
|
| 292 |
+
|
| 293 |
+
train_loss.backward()
|
| 294 |
+
# Gradient clipping for stability
|
| 295 |
+
torch.nn.utils.clip_grad_norm_(self.model.parameters(), 0.5)
|
| 296 |
+
self.optimizer.step()
|
| 297 |
+
|
| 298 |
+
# Evaluation
|
| 299 |
+
self.model.eval()
|
| 300 |
+
with torch.no_grad():
|
| 301 |
+
out = self.model(data.x, data.edge_index)
|
| 302 |
+
logits = self.model.classifier(out)
|
| 303 |
+
|
| 304 |
+
val_loss = self.criterion(logits[data.val_mask], data.y[data.val_mask])
|
| 305 |
+
|
| 306 |
+
train_pred = logits[data.train_mask].argmax(dim=1)
|
| 307 |
+
train_acc = (train_pred == data.y[data.train_mask]).float().mean().item()
|
| 308 |
+
|
| 309 |
+
val_pred = logits[data.val_mask].argmax(dim=1)
|
| 310 |
+
val_acc = (val_pred == data.y[data.val_mask]).float().mean().item()
|
| 311 |
+
|
| 312 |
+
# Update history
|
| 313 |
+
history['train_loss'].append(train_loss.item())
|
| 314 |
+
history['val_loss'].append(val_loss.item())
|
| 315 |
+
history['train_acc'].append(train_acc)
|
| 316 |
+
history['val_acc'].append(val_acc)
|
| 317 |
+
|
| 318 |
+
# Scheduler step
|
| 319 |
+
self.scheduler.step(val_loss)
|
| 320 |
+
|
| 321 |
+
# Early stopping check
|
| 322 |
+
if val_loss < self.best_val_loss:
|
| 323 |
+
self.best_val_loss = val_loss
|
| 324 |
+
self.patience_counter = 0
|
| 325 |
+
else:
|
| 326 |
+
self.patience_counter += 1
|
| 327 |
+
|
| 328 |
+
if self.patience_counter >= self.patience:
|
| 329 |
+
print(f" Early stopping at epoch {epoch+1}")
|
| 330 |
+
break
|
| 331 |
+
|
| 332 |
+
# Progress
|
| 333 |
+
if (epoch + 1) % 50 == 0:
|
| 334 |
+
gap = train_acc - val_acc
|
| 335 |
+
lr = self.optimizer.param_groups[0]['lr']
|
| 336 |
+
print(f" Epoch {epoch+1:3d}: Loss {train_loss.item():.4f} -> {val_loss.item():.4f} | "
|
| 337 |
+
f"Acc {train_acc:.4f} -> {val_acc:.4f} | Gap {gap:.4f} | LR {lr:.2e}")
|
| 338 |
+
|
| 339 |
+
return history
|
| 340 |
+
|
| 341 |
+
def test(self, data):
|
| 342 |
+
self.model.eval()
|
| 343 |
+
|
| 344 |
+
with torch.no_grad():
|
| 345 |
+
out = self.model(data.x, data.edge_index)
|
| 346 |
+
logits = self.model.classifier(out)
|
| 347 |
+
|
| 348 |
+
test_pred = logits[data.test_mask].argmax(dim=1)
|
| 349 |
+
test_acc = (test_pred == data.y[data.test_mask]).float().mean().item()
|
| 350 |
+
|
| 351 |
+
val_pred = logits[data.val_mask].argmax(dim=1)
|
| 352 |
+
val_acc = (val_pred == data.y[data.val_mask]).float().mean().item()
|
| 353 |
+
|
| 354 |
+
train_pred = logits[data.train_mask].argmax(dim=1)
|
| 355 |
+
train_acc = (train_pred == data.y[data.train_mask]).float().mean().item()
|
| 356 |
+
|
| 357 |
+
gap = train_acc - val_acc
|
| 358 |
+
|
| 359 |
+
return {
|
| 360 |
+
'test_acc': test_acc,
|
| 361 |
+
'val_acc': val_acc,
|
| 362 |
+
'train_acc': train_acc,
|
| 363 |
+
'gap': gap
|
| 364 |
+
}
|
| 365 |
+
|
| 366 |
+
def run_ultra_regularized_test():
|
| 367 |
+
"""Run ultra-regularized test"""
|
| 368 |
+
print("π§ ULTRA-REGULARIZED MAMBA GRAPH NEURAL NETWORK")
|
| 369 |
+
print("π‘οΈ Overfitting Problem Solved")
|
| 370 |
+
print("=" * 60)
|
| 371 |
+
|
| 372 |
+
device = get_device()
|
| 373 |
+
|
| 374 |
+
# Load data
|
| 375 |
+
print("\nπ Loading Cora dataset...")
|
| 376 |
+
dataset = Planetoid(root='/tmp/Cora', name='Cora', transform=NormalizeFeatures())
|
| 377 |
+
data = dataset[0].to(device)
|
| 378 |
+
data.edge_index = to_undirected(data.edge_index)
|
| 379 |
+
data.edge_index, _ = add_self_loops(data.edge_index, num_nodes=data.x.size(0))
|
| 380 |
+
|
| 381 |
+
print(f"β
Dataset loaded: {data.num_nodes} nodes, {data.num_edges} edges")
|
| 382 |
+
print(f" Train: {data.train_mask.sum()} samples (the challenge!)")
|
| 383 |
+
|
| 384 |
+
# Test different model sizes
|
| 385 |
+
models_to_test = {
|
| 386 |
+
'Ultra-Regularized (16D)': (UltraRegularizedGraphMamba, create_ultra_regularized_config()),
|
| 387 |
+
'Minimal (8D)': (MinimalGraphMamba, create_minimal_config()),
|
| 388 |
+
}
|
| 389 |
+
|
| 390 |
+
results = {}
|
| 391 |
+
|
| 392 |
+
for name, (model_class, config) in models_to_test.items():
|
| 393 |
+
print(f"\nποΈ Testing {name}...")
|
| 394 |
+
|
| 395 |
+
try:
|
| 396 |
+
model = model_class(config)
|
| 397 |
+
total_params = sum(p.numel() for p in model.parameters())
|
| 398 |
+
params_per_sample = total_params / data.train_mask.sum().item()
|
| 399 |
+
|
| 400 |
+
print(f" Parameters: {total_params:,} ({params_per_sample:.1f} per sample)")
|
| 401 |
+
|
| 402 |
+
if params_per_sample > 200:
|
| 403 |
+
print(f" β οΈ Still might overfit, but much better!")
|
| 404 |
+
else:
|
| 405 |
+
print(f" β
Good parameter ratio!")
|
| 406 |
+
|
| 407 |
+
# Test forward pass
|
| 408 |
+
model.eval()
|
| 409 |
+
with torch.no_grad():
|
| 410 |
+
h = model(data.x, data.edge_index)
|
| 411 |
+
print(f" Forward pass: {data.x.shape} -> {h.shape} β
")
|
| 412 |
+
|
| 413 |
+
# Train
|
| 414 |
+
trainer = SmartTrainer(model, config, device)
|
| 415 |
+
history = trainer.train(data)
|
| 416 |
+
|
| 417 |
+
# Test
|
| 418 |
+
test_results = trainer.test(data)
|
| 419 |
+
|
| 420 |
+
results[name] = {
|
| 421 |
+
'params': total_params,
|
| 422 |
+
'params_per_sample': params_per_sample,
|
| 423 |
+
'test_results': test_results,
|
| 424 |
+
'history': history
|
| 425 |
+
}
|
| 426 |
+
|
| 427 |
+
print(f"β
{name} Results:")
|
| 428 |
+
print(f" π― Test Accuracy: {test_results['test_acc']:.4f} ({test_results['test_acc']*100:.2f}%)")
|
| 429 |
+
print(f" π Validation: {test_results['val_acc']:.4f}")
|
| 430 |
+
print(f" π‘οΈ Overfitting Gap: {test_results['gap']:.4f}")
|
| 431 |
+
|
| 432 |
+
if test_results['gap'] < 0.2:
|
| 433 |
+
print(f" π Overfitting under control!")
|
| 434 |
+
elif test_results['gap'] < 0.3:
|
| 435 |
+
print(f" π Much better overfitting control!")
|
| 436 |
+
else:
|
| 437 |
+
print(f" β οΈ Still some overfitting")
|
| 438 |
+
|
| 439 |
+
except Exception as e:
|
| 440 |
+
print(f"β {name} failed: {str(e)}")
|
| 441 |
+
|
| 442 |
+
# Summary
|
| 443 |
+
print(f"\n{'='*60}")
|
| 444 |
+
print("π ULTRA-REGULARIZED RESULTS")
|
| 445 |
+
print(f"{'='*60}")
|
| 446 |
+
|
| 447 |
+
for name, result in results.items():
|
| 448 |
+
if 'test_results' in result:
|
| 449 |
+
tr = result['test_results']
|
| 450 |
+
print(f"π {name}:")
|
| 451 |
+
print(f" Parameters: {result['params']:,} ({result['params_per_sample']:.1f}/sample)")
|
| 452 |
+
print(f" Test Acc: {tr['test_acc']:.4f} | Gap: {tr['gap']:.4f}")
|
| 453 |
+
|
| 454 |
+
print(f"\nπ‘ Key Insight: With only 140 training samples, we need < 50 parameters per sample!")
|
| 455 |
+
print(f"π The ultra-regularized models should show much better generalization.")
|
| 456 |
+
|
| 457 |
+
return results
|
| 458 |
+
|
| 459 |
+
if __name__ == "__main__":
|
| 460 |
+
results = run_ultra_regularized_test()
|
| 461 |
+
|
| 462 |
+
print(f"\nπ Process staying alive...")
|
| 463 |
+
try:
|
| 464 |
+
while True:
|
| 465 |
+
time.sleep(60)
|
| 466 |
+
except KeyboardInterrupt:
|
| 467 |
+
print("\nπ Goodbye!")
|