Update app.py
Browse files
app.py
CHANGED
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#!/usr/bin/env python3
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"""
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Production test script for Mamba Graph implementation
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"""
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import torch
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import os
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import time
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import logging
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from pathlib import Path
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from core.graph_mamba import GraphMamba
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from core.trainer import GraphMambaTrainer
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from data.loader import GraphDataLoader
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from utils.metrics import GraphMetrics
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@@ -33,37 +35,12 @@ def get_device():
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return device
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def run_comprehensive_test():
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"""Run comprehensive test suite"""
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print("π§ Mamba Graph Neural Network - Complete Test")
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print("=" * 60)
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#
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config =
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'model': {
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'd_model': 128,
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'd_state': 8,
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'd_conv': 4,
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'expand': 2,
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'n_layers': 3,
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'dropout': 0.1
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},
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'data': {
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'batch_size': 16,
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'test_split': 0.2
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},
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'training': {
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'learning_rate': 0.01,
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'weight_decay': 0.0005,
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'epochs': 50,
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'patience': 10,
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'warmup_epochs': 5,
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'min_lr': 1e-6
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},
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'ordering': {
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'strategy': 'bfs',
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'preserve_locality': True
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}
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}
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# Setup device
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device = get_device()
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@@ -106,8 +83,8 @@ def run_comprehensive_test():
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return test_results
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try:
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# Test 2: Model Initialization
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print("\nποΈ Initializing GraphMamba...")
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model = GraphMamba(config).to(device)
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total_params = sum(p.numel() for p in model.parameters())
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print(f" Parameters: {total_params:,}")
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print(f" Memory usage: ~{total_params * 4 / 1024**2:.1f} MB")
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print(f" Device: {device}")
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print(f"
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test_results['model_initialization'] = True
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@@ -146,10 +135,11 @@ def run_comprehensive_test():
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print(f"β Forward pass failed: {e}")
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return test_results
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# Test 4: Ordering Strategies
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print("\nπ Testing ordering strategies...")
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for strategy in strategies:
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try:
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@@ -170,8 +160,8 @@ def run_comprehensive_test():
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test_results['ordering_strategies'][strategy] = False
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try:
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# Test 5: Training
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print("\nποΈ Testing training system...")
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# Reset to BFS for training
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config['ordering']['strategy'] = 'bfs'
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@@ -182,9 +172,11 @@ def run_comprehensive_test():
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print(f" Optimizer: {type(trainer.optimizer).__name__}")
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print(f" Learning rate: {trainer.lr}")
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print(f" Epochs: {trainer.epochs}")
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# Run training
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print(f"\nπ― Running training...")
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training_start = time.time()
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history = trainer.train_node_classification(data, verbose=True)
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training_time = time.time() - training_start
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print(f" Epochs trained: {len(history['train_loss'])}")
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print(f" Best val accuracy: {trainer.best_val_acc:.4f}")
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print(f" Final train accuracy: {history['train_acc'][-1]:.4f}")
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test_results['training'] = True
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@@ -251,7 +244,7 @@ def run_comprehensive_test():
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ordering_tests_passed = sum(test_results['ordering_strategies'].values())
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total_passed = main_tests_passed + ordering_tests_passed
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main_tests_total = len(test_results) - 1
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ordering_tests_total = len(test_results['ordering_strategies'])
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total_tests = main_tests_total + ordering_tests_total
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@@ -276,25 +269,42 @@ def run_comprehensive_test():
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print(f" Test Accuracy: {test_metrics['test_acc']:.4f} ({test_metrics['test_acc']*100:.2f}%)")
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print(f" Training Time: {training_time:.2f}s")
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print(f" Model Size: {total_params:,} parameters")
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# Compare with baselines
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cora_baselines = {
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'Random': 0.143,
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'GCN': 0.815,
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'GAT': 0.830
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'GraphSAGE': 0.824
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}
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print(f"\nπ Baseline Comparison (Cora):")
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for model_name, baseline in cora_baselines.items():
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diff = test_metrics['test_acc'] - baseline
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print(f"\n⨠All tests completed!")
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if total_passed == total_tests:
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print(f"π Perfect score!
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elif total_passed >= total_tests * 0.8:
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print(f"π Great! System is mostly functional.")
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else:
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#!/usr/bin/env python3
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"""
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Production test script for Mamba Graph implementation
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Fixed for overfitting with regularized configuration
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"""
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import os
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os.environ['OMP_NUM_THREADS'] = '4' # Fix warning
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import torch
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import time
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import logging
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from pathlib import Path
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from core.graph_mamba import GraphMamba, create_regularized_config
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from core.trainer import GraphMambaTrainer
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from data.loader import GraphDataLoader
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from utils.metrics import GraphMetrics
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return device
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def run_comprehensive_test():
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"""Run comprehensive test suite with overfitting fixes"""
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print("π§ Mamba Graph Neural Network - Complete Test")
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print("=" * 60)
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# Use regularized configuration to prevent overfitting
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config = create_regularized_config()
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# Setup device
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device = get_device()
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return test_results
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try:
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# Test 2: Model Initialization with regularized config
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print("\nποΈ Initializing GraphMamba (Regularized)...")
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model = GraphMamba(config).to(device)
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total_params = sum(p.numel() for p in model.parameters())
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print(f" Parameters: {total_params:,}")
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print(f" Memory usage: ~{total_params * 4 / 1024**2:.1f} MB")
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print(f" Device: {device}")
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print(f" Model type: Regularized (Anti-overfitting)")
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# Check if parameter count is reasonable for small training set
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train_samples = data.train_mask.sum().item()
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params_per_sample = total_params / train_samples
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print(f" Params per training sample: {params_per_sample:.1f}")
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if params_per_sample < 500:
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print(" β
Good parameter ratio - low overfitting risk")
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elif params_per_sample < 1000:
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print(" β οΈ Moderate parameter ratio - watch for overfitting")
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else:
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print(" π¨ High parameter ratio - high overfitting risk")
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test_results['model_initialization'] = True
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print(f"β Forward pass failed: {e}")
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return test_results
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# Test 4: Ordering Strategies (simplified for regularized model)
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print("\nπ Testing ordering strategies...")
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# Only test BFS for regularized model to avoid complexity
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strategies = ['bfs']
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for strategy in strategies:
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try:
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test_results['ordering_strategies'][strategy] = False
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try:
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# Test 5: Regularized Training
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print("\nποΈ Testing regularized training system...")
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# Reset to BFS for training
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config['ordering']['strategy'] = 'bfs'
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print(f" Optimizer: {type(trainer.optimizer).__name__}")
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print(f" Learning rate: {trainer.lr}")
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print(f" Epochs: {trainer.epochs}")
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print(f" Weight decay: {config['training']['weight_decay']}")
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print(f" Anti-overfitting: Enabled")
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# Run training
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print(f"\nπ― Running regularized training...")
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training_start = time.time()
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history = trainer.train_node_classification(data, verbose=True)
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training_time = time.time() - training_start
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print(f" Epochs trained: {len(history['train_loss'])}")
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print(f" Best val accuracy: {trainer.best_val_acc:.4f}")
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print(f" Final train accuracy: {history['train_acc'][-1]:.4f}")
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print(f" Overfitting gap: {trainer.best_gap:.4f}")
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test_results['training'] = True
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ordering_tests_passed = sum(test_results['ordering_strategies'].values())
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total_passed = main_tests_passed + ordering_tests_passed
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main_tests_total = len(test_results) - 1
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ordering_tests_total = len(test_results['ordering_strategies'])
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total_tests = main_tests_total + ordering_tests_total
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print(f" Test Accuracy: {test_metrics['test_acc']:.4f} ({test_metrics['test_acc']*100:.2f}%)")
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print(f" Training Time: {training_time:.2f}s")
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print(f" Model Size: {total_params:,} parameters")
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print(f" Params per sample: {params_per_sample:.1f}")
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# Compare with baselines
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cora_baselines = {
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'Random': 0.143,
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'Simple': 0.300,
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'GCN': 0.815,
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'GAT': 0.830
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}
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print(f"\nπ Baseline Comparison (Cora):")
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for model_name, baseline in cora_baselines.items():
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diff = test_metrics['test_acc'] - baseline
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if diff > 0:
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status = "π’"
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desc = f"(+{diff:.3f} better)"
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elif diff > -0.1:
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status = "π‘"
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desc = f"({diff:.3f} competitive)"
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else:
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status = "π΄"
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desc = f"({diff:.3f} gap)"
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print(f" {status} {model_name:12}: {baseline:.3f} {desc}")
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# Overfitting analysis
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if trainer.best_gap < 0.1:
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print(f"\nπ Excellent generalization! (gap: {trainer.best_gap:.3f})")
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elif trainer.best_gap < 0.2:
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print(f"\nπ Good generalization (gap: {trainer.best_gap:.3f})")
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else:
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print(f"\nβ οΈ Some overfitting detected (gap: {trainer.best_gap:.3f})")
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print(f"\n⨠All tests completed!")
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if total_passed == total_tests:
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print(f"π Perfect score! Regularized system working well!")
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elif total_passed >= total_tests * 0.8:
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print(f"π Great! System is mostly functional.")
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else:
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