Spaces:
Runtime error
Runtime error
Commit
·
62efb75
1
Parent(s):
83811e8
tcr is back online
Browse files
app.py
CHANGED
|
@@ -19,8 +19,7 @@ all_models = ModelRegistry()
|
|
| 19 |
ppi_task = all_tasks.register_task(PpiTask(model_dict=all_models))
|
| 20 |
tdi_task = all_tasks.register_task(DtiTask(model_dict=all_models))
|
| 21 |
ps_task = all_tasks.register_task(PsTask(model_dict=all_models))
|
| 22 |
-
|
| 23 |
-
tcr_task = "not ready yet"
|
| 24 |
|
| 25 |
# create the model holders. hold the model and the tokenizer, lazy download
|
| 26 |
# note that the list of relevent tasks needs to be stated.
|
|
@@ -38,11 +37,18 @@ all_models.register_model(
|
|
| 38 |
)
|
| 39 |
all_models.register_model(
|
| 40 |
model_path="ibm/biomed.omics.bl.sm.ma-ted-458m",
|
| 41 |
-
task_list=[ppi_task
|
| 42 |
)
|
| 43 |
-
all_models.register_model(
|
| 44 |
-
|
| 45 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 46 |
|
| 47 |
def create_application():
|
| 48 |
def task_change(value):
|
|
@@ -59,16 +65,16 @@ def create_application():
|
|
| 59 |
)
|
| 60 |
else:
|
| 61 |
return (gr.update(visible=False), *visibility)
|
| 62 |
-
|
| 63 |
def model_change(value):
|
| 64 |
-
return gr.update(link=f"https://huggingface.co/{value}",visible=True)
|
| 65 |
|
| 66 |
with gr.Blocks(theme="Zarkel/IBM_Carbon_Theme") as application:
|
| 67 |
task_dropdown = gr.Dropdown(
|
| 68 |
choices=["Select task"] + list(all_tasks.keys()), label="Mammal Task"
|
| 69 |
)
|
| 70 |
task_dropdown.interactive = True
|
| 71 |
-
with gr.Row()
|
| 72 |
model_name_dropdown = gr.Dropdown(
|
| 73 |
choices=[
|
| 74 |
model_name
|
|
@@ -80,11 +86,11 @@ def create_application():
|
|
| 80 |
visible=False,
|
| 81 |
scale=10,
|
| 82 |
)
|
| 83 |
-
goto_card_button = gr.Button(
|
|
|
|
|
|
|
| 84 |
model_name_dropdown.change(
|
| 85 |
-
model_change,
|
| 86 |
-
inputs=[model_name_dropdown],
|
| 87 |
-
outputs=[goto_card_button]
|
| 88 |
)
|
| 89 |
|
| 90 |
task_dropdown.change(
|
|
@@ -96,7 +102,6 @@ def create_application():
|
|
| 96 |
for task in all_tasks
|
| 97 |
],
|
| 98 |
)
|
| 99 |
-
|
| 100 |
|
| 101 |
# def set_demo_vis(main_text):
|
| 102 |
# main_text=main_text
|
|
|
|
| 19 |
ppi_task = all_tasks.register_task(PpiTask(model_dict=all_models))
|
| 20 |
tdi_task = all_tasks.register_task(DtiTask(model_dict=all_models))
|
| 21 |
ps_task = all_tasks.register_task(PsTask(model_dict=all_models))
|
| 22 |
+
tcr_task = all_tasks.register_task(TcrTask(model_dict=all_models))
|
|
|
|
| 23 |
|
| 24 |
# create the model holders. hold the model and the tokenizer, lazy download
|
| 25 |
# note that the list of relevent tasks needs to be stated.
|
|
|
|
| 37 |
)
|
| 38 |
all_models.register_model(
|
| 39 |
model_path="ibm/biomed.omics.bl.sm.ma-ted-458m",
|
| 40 |
+
task_list=[ppi_task],
|
| 41 |
)
|
| 42 |
+
all_models.register_model(
|
| 43 |
+
"https://huggingface.co/ibm/biomed.omics.bl.sm.ma-ted-458m.moleculenet_clintox_tox"
|
| 44 |
+
)
|
| 45 |
+
all_models.register_model(
|
| 46 |
+
"https://huggingface.co/ibm/biomed.omics.bl.sm.ma-ted-458m.moleculenet_clintox_fda"
|
| 47 |
+
)
|
| 48 |
+
all_models.register_model(
|
| 49 |
+
"https://huggingface.co/ibm/biomed.omics.bl.sm.ma-ted-458m.moleculenet_bbbp"
|
| 50 |
+
)
|
| 51 |
+
|
| 52 |
|
| 53 |
def create_application():
|
| 54 |
def task_change(value):
|
|
|
|
| 65 |
)
|
| 66 |
else:
|
| 67 |
return (gr.update(visible=False), *visibility)
|
| 68 |
+
|
| 69 |
def model_change(value):
|
| 70 |
+
return gr.update(link=f"https://huggingface.co/{value}", visible=True)
|
| 71 |
|
| 72 |
with gr.Blocks(theme="Zarkel/IBM_Carbon_Theme") as application:
|
| 73 |
task_dropdown = gr.Dropdown(
|
| 74 |
choices=["Select task"] + list(all_tasks.keys()), label="Mammal Task"
|
| 75 |
)
|
| 76 |
task_dropdown.interactive = True
|
| 77 |
+
with gr.Row():
|
| 78 |
model_name_dropdown = gr.Dropdown(
|
| 79 |
choices=[
|
| 80 |
model_name
|
|
|
|
| 86 |
visible=False,
|
| 87 |
scale=10,
|
| 88 |
)
|
| 89 |
+
goto_card_button = gr.Button(
|
| 90 |
+
"Link to model card", size="sm", scale=0, visible=False
|
| 91 |
+
)
|
| 92 |
model_name_dropdown.change(
|
| 93 |
+
model_change, inputs=[model_name_dropdown], outputs=[goto_card_button]
|
|
|
|
|
|
|
| 94 |
)
|
| 95 |
|
| 96 |
task_dropdown.change(
|
|
|
|
| 102 |
for task in all_tasks
|
| 103 |
],
|
| 104 |
)
|
|
|
|
| 105 |
|
| 106 |
# def set_demo_vis(main_text):
|
| 107 |
# main_text=main_text
|