app.py

import os
import torch
import gradio as gr
from torchvision import models, transforms
from datasets import load_dataset
from torch.utils.data import DataLoader
from torch import nn, optim
from PIL import Image

# Define transformation
transform = transforms.Compose([
    transforms.Resize((224, 224)),
    transforms.ToTensor(),
    transforms.Normalize([0.485, 0.456, 0.406], [0.229, 0.224, 0.225])
])

# Load and train model if not already saved
model_path = "model.pth"

if not os.path.exists(model_path):
    dataset = load_dataset("hongrui/mimic_chest_xray_v_1", split="train")

    class XRayDataset(torch.utils.data.Dataset):
        def __init__(self, dataset):
            self.dataset = dataset

        def __len__(self):
            return len(self.dataset)

        def __getitem__(self, idx):
            img = Image.open(self.dataset[idx]['image_path']).convert("RGB")
            label = int(self.dataset[idx]['label'])
            return transform(img), label

    train_dataset = XRayDataset(dataset)
    train_loader = DataLoader(train_dataset, batch_size=32, shuffle=True)

    model = models.resnet18(pretrained=True)
    model.fc = nn.Linear(model.fc.in_features, 2)
    device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
    model = model.to(device)

    criterion = nn.CrossEntropyLoss()
    optimizer = optim.Adam(model.parameters(), lr=0.001)

    model.train()
    for epoch in range(3):  # Few epochs for speed
        for inputs, labels in train_loader:
            inputs, labels = inputs.to(device), labels.to(device)
            optimizer.zero_grad()
            outputs = model(inputs)
            loss = criterion(outputs, labels)
            loss.backward()
            optimizer.step()

    torch.save(model.state_dict(), model_path)

# Load model for inference
model = models.resnet18(pretrained=False)
model.fc = nn.Linear(model.fc.in_features, 2)
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
model.load_state_dict(torch.load(model_path, map_location=device))
model = model.to(device)
model.eval()

# Inference function
def predict(img):
    img = transform(img).unsqueeze(0).to(device)
    with torch.no_grad():
        outputs = model(img)
        _, predicted = torch.max(outputs, 1)
    return "Abnormal" if predicted.item() == 1 else "Normal"

# Gradio app
interface = gr.Interface(
    fn=predict,
    inputs=gr.Image(type="pil"),
    outputs="text",
    title="Chest X-ray Classification",
    description="Upload a chest X-ray image to classify it as Normal or Abnormal."
)

interface.launch()