Upload README.md with huggingface_hub
Browse files
README.md
ADDED
|
@@ -0,0 +1,121 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
# BSG CyLLama - Scientific Summarization Model
|
| 2 |
+
|
| 3 |
+
BSG CyLLama is a fine-tuned Llama-3.2-1B-Instruct model specialized for scientific text summarization. The model is trained to generate high-quality abstracts and summaries from scientific papers and research content.
|
| 4 |
+
|
| 5 |
+
## Model Details
|
| 6 |
+
|
| 7 |
+
- **Base Model**: meta-llama/Llama-3.2-1B-Instruct
|
| 8 |
+
- **Fine-tuning Method**: LoRA (Low-Rank Adaptation)
|
| 9 |
+
- **Training Samples**: 19,174 scientific abstracts and summaries
|
| 10 |
+
- **Task**: Scientific Text Summarization
|
| 11 |
+
- **Language**: English
|
| 12 |
+
|
| 13 |
+
## Training Configuration
|
| 14 |
+
|
| 15 |
+
- **LoRA Rank**: 128
|
| 16 |
+
- **LoRA Alpha**: 256
|
| 17 |
+
- **LoRA Dropout**: 0.05
|
| 18 |
+
- **Target Modules**: v_proj, o_proj, k_proj, gate_proj, q_proj, up_proj, down_proj
|
| 19 |
+
- **Embedding Dimension**: 1024
|
| 20 |
+
- **Hidden Dimension**: 2048
|
| 21 |
+
|
| 22 |
+
## Usage
|
| 23 |
+
|
| 24 |
+
```python
|
| 25 |
+
from transformers import AutoTokenizer, AutoModelForCausalLM
|
| 26 |
+
from peft import PeftModel
|
| 27 |
+
import torch
|
| 28 |
+
|
| 29 |
+
# Load base model and tokenizer
|
| 30 |
+
base_model_name = "meta-llama/Llama-3.2-1B-Instruct"
|
| 31 |
+
tokenizer = AutoTokenizer.from_pretrained(base_model_name)
|
| 32 |
+
base_model = AutoModelForCausalLM.from_pretrained(
|
| 33 |
+
base_model_name,
|
| 34 |
+
torch_dtype=torch.float16,
|
| 35 |
+
device_map="auto"
|
| 36 |
+
)
|
| 37 |
+
|
| 38 |
+
# Load LoRA adapter
|
| 39 |
+
model = PeftModel.from_pretrained(base_model, "path/to/bsg-cyllama")
|
| 40 |
+
|
| 41 |
+
# Example usage
|
| 42 |
+
def generate_summary(text, max_length=200):
|
| 43 |
+
prompt = f"Summarize the following scientific text:\n\n{text}\n\nSummary:"
|
| 44 |
+
|
| 45 |
+
inputs = tokenizer.encode(prompt, return_tensors="pt")
|
| 46 |
+
|
| 47 |
+
with torch.no_grad():
|
| 48 |
+
outputs = model.generate(
|
| 49 |
+
inputs,
|
| 50 |
+
max_length=max_length,
|
| 51 |
+
num_return_sequences=1,
|
| 52 |
+
temperature=0.7,
|
| 53 |
+
pad_token_id=tokenizer.eos_token_id
|
| 54 |
+
)
|
| 55 |
+
|
| 56 |
+
summary = tokenizer.decode(outputs[0], skip_special_tokens=True)
|
| 57 |
+
return summary.split("Summary:")[-1].strip()
|
| 58 |
+
|
| 59 |
+
# Example
|
| 60 |
+
scientific_text = "Your scientific paper content here..."
|
| 61 |
+
summary = generate_summary(scientific_text)
|
| 62 |
+
print(summary)
|
| 63 |
+
```
|
| 64 |
+
|
| 65 |
+
## Training Data
|
| 66 |
+
|
| 67 |
+
The model was trained on a comprehensive dataset of scientific abstracts and summaries:
|
| 68 |
+
- **Total Records**: 19,174
|
| 69 |
+
- **Sources**: Scientific literature including biomedical, computational, and interdisciplinary research
|
| 70 |
+
- **Format**: Abstract → Summary pairs with metadata
|
| 71 |
+
- **Quality**: Curated and clustered data with quality filtering
|
| 72 |
+
|
| 73 |
+
## Files Included
|
| 74 |
+
|
| 75 |
+
- `adapter_config.json`: LoRA adapter configuration
|
| 76 |
+
- `adapter_model.safetensors`: LoRA adapter weights
|
| 77 |
+
- `config.json`: Model configuration
|
| 78 |
+
- `prompt_generator.pt`: Prompt generation utilities
|
| 79 |
+
- `tokenizer.*`: Tokenizer files
|
| 80 |
+
- Training scripts and data processing utilities
|
| 81 |
+
|
| 82 |
+
## Training Scripts
|
| 83 |
+
|
| 84 |
+
- `bsg_cyllama_trainer_v2.py`: Main training script
|
| 85 |
+
- `scientific_model_inference2.py`: Inference utilities
|
| 86 |
+
- `bsg_training_data_gen.py`: Data generation pipeline
|
| 87 |
+
- `compile_complete_training_data.py`: Data compilation script
|
| 88 |
+
|
| 89 |
+
## Performance
|
| 90 |
+
|
| 91 |
+
The model demonstrates strong performance in:
|
| 92 |
+
- Scientific abstract summarization
|
| 93 |
+
- Research paper summarization
|
| 94 |
+
- Technical content condensation
|
| 95 |
+
- Maintaining scientific accuracy and terminology
|
| 96 |
+
|
| 97 |
+
## Limitations
|
| 98 |
+
|
| 99 |
+
- Specialized for scientific text; may not perform optimally on general text
|
| 100 |
+
- Based on Llama-3.2-1B, so has inherent size limitations
|
| 101 |
+
- English language only
|
| 102 |
+
- May require domain-specific fine-tuning for highly specialized fields
|
| 103 |
+
|
| 104 |
+
## Citation
|
| 105 |
+
|
| 106 |
+
```bibtex
|
| 107 |
+
@misc{bsg-cyllama-2025,
|
| 108 |
+
title={BSG CyLLama: Scientific Summarization with LoRA-tuned Llama},
|
| 109 |
+
author={BSG Research Team},
|
| 110 |
+
year={2025},
|
| 111 |
+
url={https://huggingface.co/bsg-cyllama}
|
| 112 |
+
}
|
| 113 |
+
```
|
| 114 |
+
|
| 115 |
+
## License
|
| 116 |
+
|
| 117 |
+
Please refer to the base Llama-3.2 license terms for usage guidelines.
|
| 118 |
+
|
| 119 |
+
## Contact
|
| 120 |
+
|
| 121 |
+
For questions or collaboration opportunities, please open an issue in this repository.
|