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---
license: mit
base_model: microsoft/BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext
tags:
- generated_from_trainer
metrics:
- precision
- recall
- f1
- accuracy
model-index:
- name: biomedbert-finetuned-ner
results: []
---
<!-- This model card has been generated automatically according to the information the Trainer had access to. You
should probably proofread and complete it, then remove this comment. -->
# biomedbert-finetuned-ner
This model is a fine-tuned version of [microsoft/BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext](https://huggingface.co/microsoft/BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext) on an unknown dataset.
It achieves the following results on the evaluation set:
- Loss: 0.4196
- Precision: 0.6579
- Recall: 0.6908
- F1: 0.6739
- Accuracy: 0.8581
## Model description
More information needed
## Intended uses & limitations
More information needed
## Training and evaluation data
More information needed
## Training procedure
### Training hyperparameters
The following hyperparameters were used during training:
- learning_rate: 2e-05
- train_batch_size: 8
- eval_batch_size: 8
- seed: 42
- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
- lr_scheduler_type: linear
- num_epochs: 3
### Training results
| Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1 | Accuracy |
|:-------------:|:-----:|:----:|:---------------:|:---------:|:------:|:------:|:--------:|
| No log | 1.0 | 305 | 0.4210 | 0.6510 | 0.6708 | 0.6608 | 0.8526 |
| 0.4865 | 2.0 | 610 | 0.4120 | 0.6555 | 0.6968 | 0.6755 | 0.8559 |
| 0.4865 | 3.0 | 915 | 0.4196 | 0.6579 | 0.6908 | 0.6739 | 0.8581 |
### Framework versions
- Transformers 4.40.1
- Pytorch 2.2.1+cu121
- Datasets 2.19.1
- Tokenizers 0.19.1
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