Graph Machine Learning
Birder
chemistry
flt17 commited on
Commit
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1 Parent(s): 274a449

Upload water models

Browse files
water/config_cueq.yaml ADDED
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+ model:
2
+ precision: 64
3
+ num_chem_elements: 2
4
+ edge_cutoff: 6
5
+ num_edge_rbf: 8
6
+ num_edge_poly_cutoff: 6
7
+ num_vel_rbf: 8
8
+ vel_max: 0.135
9
+ max_rotation_order: 2
10
+ num_hidden_channels: 64
11
+ num_mp_layers: 4
12
+ edge_mlp_kwargs:
13
+ n_neurons:
14
+ - 64
15
+ - 64
16
+ - 64
17
+ activation: silu
18
+ vel_mlp_kwargs:
19
+ n_neurons:
20
+ - 64
21
+ - 64
22
+ - 64
23
+ activation: silu
24
+ nl_gate_kwargs:
25
+ activation_scalars:
26
+ o: tanh
27
+ e: silu
28
+ activation_gates:
29
+ e: silu
30
+ conserve_ang_mom: false
31
+ o3_backend: cueq
32
+ net_lin_mom:
33
+ - 0.0
34
+ - 0.0
35
+ - 0.0
36
+ data:
37
+ root: /dccstor/chemistry_ai/trajcast/paper/water/data
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+ name: water_300K_N5000_dt5.0_rc6_train
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+ cutoff_radius: 6
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+ files:
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+ - water_300K_rep1_timestep50_train1667.extxyz
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+ - water_300K_rep2_timestep50_train1667.extxyz
43
+ - water_300K_rep3_timestep50_train1666.extxyz
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+ rename: true
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+ atom_type_mapper:
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+ 1: 0
47
+ 8: 1
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+ training:
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+ seed: 2303
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+ model_type: EfficientTrajCastModel
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+ device: cuda
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+ restart_latest: true
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+ target_field: target
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+ reference_fields:
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+ - displacements
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+ - update_velocities
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+ batch_size: 2
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+ max_grad_norm: 0.5
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+ num_epochs: 1500
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+ criterion:
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+ loss_type:
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+ main_loss: mse
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+ learnable_weights: false
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+ optimizer: adam
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+ optimizer_settings:
66
+ lr: 0.01
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+ amsgrad: true
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+ scheduler:
69
+ - ReduceLROnPlateau
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+ scheduler_settings:
71
+ ReduceLROnPlateau:
72
+ factor: 0.8
73
+ patience: 25
74
+ min_lr: 0.0001
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+ chained_scheduler_hp:
76
+ milestones:
77
+ - 100000000
78
+ per_epoch: true
79
+ monitor_lr_scheduler: false
80
+ tensorboard_settings:
81
+ loss: true
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+ lr: true
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+ weights:
84
+ every: 5
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+ gradients:
86
+ every: 5
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+ loss_validation:
88
+ data:
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+ root: /dccstor/chemistry_ai/trajcast/paper/water/data
90
+ name: water_300K_N5000_dt5.0_rc6_val
91
+ files:
92
+ - water_300K_rep4_timestep50_val1250.extxyz
93
+ cutoff_radius: 6
94
+ rename: true
95
+ atom_type_mapper:
96
+ 1: 0
97
+ 8: 1
water/config_e3nn.yaml ADDED
@@ -0,0 +1,35 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ model:
2
+ precision: 64
3
+ num_chem_elements: 2
4
+ edge_cutoff: 6
5
+ num_edge_rbf: 8
6
+ num_edge_poly_cutoff: 6
7
+ num_vel_rbf: 8
8
+ vel_max: 0.135
9
+ max_rotation_order: 2
10
+ num_hidden_channels: 64
11
+ num_mp_layers: 4
12
+ edge_mlp_kwargs:
13
+ n_neurons:
14
+ - 64
15
+ - 64
16
+ - 64
17
+ activation: silu
18
+ vel_mlp_kwargs:
19
+ n_neurons:
20
+ - 64
21
+ - 64
22
+ - 64
23
+ activation: silu
24
+ nl_gate_kwargs:
25
+ activation_scalars:
26
+ o: tanh
27
+ e: silu
28
+ activation_gates:
29
+ e: silu
30
+ conserve_ang_mom: false
31
+ o3_backend: e3nn
32
+ net_lin_mom:
33
+ - 0.0
34
+ - 0.0
35
+ - 0.0
water/state_dict_cueq.pt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:a83d0eb52654225321f37cff199ece49546dad894205124ed9b81c3329d36e2a
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+ size 18592910
water/state_dict_e3nn.pt ADDED
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+ version https://git-lfs.github.com/spec/v1
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+ oid sha256:769d00ab4b8836e19cffe00accb84e13ad7400c8c1065e0d57f42631bd7f59bd
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+ size 18717216