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  1. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/model_summary.csv +10 -0
  2. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv +104 -0
  3. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt +28 -0
  4. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/training_log_2024_10_23_18_18_49.txt +32 -0
  5. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.csv +41 -0
  6. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json +132 -0
  7. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/model_summary.csv +10 -0
  8. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv +104 -0
  9. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt +28 -0
  10. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/training_log_2024_10_24_00_11_19.txt +32 -0
  11. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.csv +41 -0
  12. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json +132 -0
  13. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/model_summary.csv +10 -0
  14. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.csv +104 -0
  15. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.txt +28 -0
  16. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/training_log_2025_3_6_07_48_26.txt +32 -0
  17. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.csv +41 -0
  18. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.json +132 -0
  19. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/model_summary.csv +10 -0
  20. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv +104 -0
  21. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt +28 -0
  22. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/training_log_2024_10_23_20_19_27.txt +32 -0
  23. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.csv +41 -0
  24. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json +132 -0
  25. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/model_summary.csv +10 -0
  26. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.csv +104 -0
  27. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.txt +28 -0
  28. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/training_log_2025_3_6_07_47_32.txt +32 -0
  29. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.csv +41 -0
  30. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.json +132 -0
  31. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/model_summary.csv +10 -0
  32. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv +104 -0
  33. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt +28 -0
  34. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/training_log_2024_10_23_20_14_28.txt +32 -0
  35. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.csv +41 -0
  36. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json +132 -0
  37. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/model_summary.csv +10 -0
  38. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.csv +104 -0
  39. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.txt +28 -0
  40. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/training_log_2025_3_6_07_45_57.txt +32 -0
  41. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.csv +41 -0
  42. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.json +132 -0
  43. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/model_summary.csv +10 -0
  44. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv +104 -0
  45. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt +28 -0
  46. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/training_log_2024_10_24_00_12_00.txt +32 -0
  47. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.csv +41 -0
  48. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json +132 -0
  49. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/model_summary.csv +10 -0
  50. baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.csv +104 -0
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/model_summary.csv ADDED
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97
+ Task121_UCL
98
+ Task124_DecathProst
99
+ Dice
100
+ mask_1
101
+ 0.8755 +/- 0.0095
102
+ 87.55% +/- 0.95%
103
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
104
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt ADDED
@@ -0,0 +1,28 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluation performed after Epoch 50, trained on fold 0.
2
+
3
+ The nnUNetTrainerSequential model trained on Task121_UCL has been used for this evaluation with the Task121_UCL head. The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+
5
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and IoU as metric:
6
+ mean (+/- std): 0.7216980457305908 +/- 0.011046600466457779
7
+
8
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and Dice as metric:
9
+ mean (+/- std): 0.8383080959320068 +/- 0.007484230162726026
10
+
11
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and IoU as metric:
12
+ mean (+/- std): 0.6791614443063736 +/- 0.015639917452228213
13
+
14
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and Dice as metric:
15
+ mean (+/- std): 0.8088269382715225 +/- 0.010989750969014415
16
+
17
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and IoU as metric:
18
+ mean (+/- std): 0.7607880433400472 +/- 0.007390005477683663
19
+
20
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and Dice as metric:
21
+ mean (+/- std): 0.8641248742739359 +/- 0.004778980946586157
22
+
23
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and IoU as metric:
24
+ mean (+/- std): 0.7787193059921265 +/- 0.014966212309353286
25
+
26
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and Dice as metric:
27
+ mean (+/- std): 0.8755156823566982 +/- 0.009487025181823762
28
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/training_log_2024_10_23_18_18_49.txt ADDED
@@ -0,0 +1,32 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Starting...
2
+ 2024-10-23 18:18:49.345273: The nnUNetTrainerSequential model trained on Task121_UCL will be used for this evaluation with the Task121_UCL head.
3
+ 2024-10-23 18:18:49.345482: The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+ 2024-10-23 18:18:49.345519: Start performing evaluation on fold 0 for the following tasks: Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst.
5
+
6
+ 2024-10-23 18:18:49.348799: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task121_UCL/splits_final.pkl
7
+ 2024-10-23 18:18:49.348916: The split file contains 5 splits.
8
+ 2024-10-23 18:18:49.348971: Desired fold for training: 0
9
+ 2024-10-23 18:18:49.349011: This split has 10 training and 3 validation cases.
10
+ 2024-10-23 18:18:50.941587: Performing validation with validation data from task Task121_UCL.
11
+ 2024-10-23 18:20:18.823312: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task122_I2CVB/splits_final.pkl
12
+ 2024-10-23 18:20:18.823568: The split file contains 5 splits.
13
+ 2024-10-23 18:20:18.823621: Desired fold for training: 0
14
+ 2024-10-23 18:20:18.823665: This split has 15 training and 4 validation cases.
15
+ 2024-10-23 18:20:25.730654: Performing validation with validation data from task Task122_I2CVB.
16
+ 2024-10-23 18:21:09.637061: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task123_ISBI/splits_final.pkl
17
+ 2024-10-23 18:21:09.637411: The split file contains 5 splits.
18
+ 2024-10-23 18:21:09.637493: Desired fold for training: 0
19
+ 2024-10-23 18:21:09.637554: This split has 24 training and 6 validation cases.
20
+ 2024-10-23 18:21:13.318519: Performing validation with validation data from task Task123_ISBI.
21
+ 2024-10-23 18:21:56.121592: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task124_DecathProst/splits_final.pkl
22
+ 2024-10-23 18:21:56.122041: The split file contains 5 splits.
23
+ 2024-10-23 18:21:56.122129: Desired fold for training: 0
24
+ 2024-10-23 18:21:56.122196: This split has 25 training and 7 validation cases.
25
+ 2024-10-23 18:22:01.424330: Performing validation with validation data from task Task124_DecathProst.
26
+ 2024-10-23 18:22:39.727110: Finished with the evaluation on fold 0. The results can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics.csv or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json.
27
+
28
+ 2024-10-23 18:22:39.727373: Summarizing the results (calculate mean and std)..
29
+ 2024-10-23 18:22:39.868487: The summarized results of the evaluation on fold 0 can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv.
30
+
31
+
32
+ 2024-10-23 18:22:39.868589: The Evaluation took 230.52 seconds.
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.csv ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Epoch Task subject_id seg_mask metric value
2
+ epoch_50 Task121_UCL Case01 mask_1 IoU 0.7314256429672241
3
+ epoch_50 Task121_UCL Case01 mask_1 Dice 0.8448825478553772
4
+ epoch_50 Task121_UCL Case32 mask_1 IoU 0.7274206280708313
5
+ epoch_50 Task121_UCL Case32 mask_1 Dice 0.8422043919563293
6
+ epoch_50 Task121_UCL Case34 mask_1 IoU 0.706247866153717
7
+ epoch_50 Task121_UCL Case34 mask_1 Dice 0.827837347984314
8
+ epoch_50 Task122_I2CVB Case03 mask_1 IoU 0.6658427715301514
9
+ epoch_50 Task122_I2CVB Case03 mask_1 Dice 0.7994065284729004
10
+ epoch_50 Task122_I2CVB Case08 mask_1 IoU 0.6742446422576904
11
+ epoch_50 Task122_I2CVB Case08 mask_1 Dice 0.8054314255714417
12
+ epoch_50 Task122_I2CVB Case13 mask_1 IoU 0.670806348323822
13
+ epoch_50 Task122_I2CVB Case13 mask_1 Dice 0.8029731512069702
14
+ epoch_50 Task122_I2CVB Case15 mask_1 IoU 0.7057520151138306
15
+ epoch_50 Task122_I2CVB Case15 mask_1 Dice 0.8274966478347778
16
+ epoch_50 Task123_ISBI Case03 mask_1 IoU 0.7648935317993164
17
+ epoch_50 Task123_ISBI Case03 mask_1 Dice 0.8667871356010437
18
+ epoch_50 Task123_ISBI Case08 mask_1 IoU 0.7688853144645691
19
+ epoch_50 Task123_ISBI Case08 mask_1 Dice 0.8693444132804871
20
+ epoch_50 Task123_ISBI Case12 mask_1 IoU 0.7636995315551758
21
+ epoch_50 Task123_ISBI Case12 mask_1 Dice 0.8660199642181396
22
+ epoch_50 Task123_ISBI Case15 mask_1 IoU 0.766016960144043
23
+ epoch_50 Task123_ISBI Case15 mask_1 Dice 0.867508053779602
24
+ epoch_50 Task123_ISBI Case18 mask_1 IoU 0.751737117767334
25
+ epoch_50 Task123_ISBI Case18 mask_1 Dice 0.8582761883735657
26
+ epoch_50 Task123_ISBI Case26 mask_1 IoU 0.749495804309845
27
+ epoch_50 Task123_ISBI Case26 mask_1 Dice 0.8568134903907776
28
+ epoch_50 Task124_DecathProst Case00 mask_1 IoU 0.7955697774887085
29
+ epoch_50 Task124_DecathProst Case00 mask_1 Dice 0.8861474394798279
30
+ epoch_50 Task124_DecathProst Case04 mask_1 IoU 0.7908786535263062
31
+ epoch_50 Task124_DecathProst Case04 mask_1 Dice 0.8832297921180725
32
+ epoch_50 Task124_DecathProst Case14 mask_1 IoU 0.7870696187019348
33
+ epoch_50 Task124_DecathProst Case14 mask_1 Dice 0.8808494210243225
34
+ epoch_50 Task124_DecathProst Case20 mask_1 IoU 0.7664221525192261
35
+ epoch_50 Task124_DecathProst Case20 mask_1 Dice 0.8677678108215332
36
+ epoch_50 Task124_DecathProst Case25 mask_1 IoU 0.7917458415031433
37
+ epoch_50 Task124_DecathProst Case25 mask_1 Dice 0.8837702870368958
38
+ epoch_50 Task124_DecathProst Case31 mask_1 IoU 0.7628431916236877
39
+ epoch_50 Task124_DecathProst Case31 mask_1 Dice 0.8654691576957703
40
+ epoch_50 Task124_DecathProst Case42 mask_1 IoU 0.7565059065818787
41
+ epoch_50 Task124_DecathProst Case42 mask_1 Dice 0.8613758683204651
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL/Task121_UCL/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json ADDED
@@ -0,0 +1,132 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "epoch_50": {
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+ "Task121_UCL": {
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+ "Case01": {
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+ "mask_1": {
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+ "IoU": 0.7314256429672241,
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+ "Dice": 0.8448825478553772
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+ }
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+ },
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+ "Case32": {
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+ "mask_1": {
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+ "IoU": 0.7274206280708313,
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+ "Dice": 0.8422043919563293
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+ }
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+ },
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+ "Case34": {
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+ "mask_1": {
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+ "IoU": 0.706247866153717,
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+ "Dice": 0.827837347984314
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+ }
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+ }
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+ },
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+ "Task122_I2CVB": {
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+ "Case03": {
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+ "mask_1": {
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+ "IoU": 0.6658427715301514,
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+ "Dice": 0.7994065284729004
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+ }
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+ },
30
+ "Case08": {
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+ "mask_1": {
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+ "IoU": 0.6742446422576904,
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+ "Dice": 0.8054314255714417
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+ }
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+ },
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+ "Case13": {
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+ "mask_1": {
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+ "IoU": 0.670806348323822,
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+ "Dice": 0.8029731512069702
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+ }
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+ },
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+ "Case15": {
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+ "mask_1": {
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+ "IoU": 0.7057520151138306,
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+ "Dice": 0.8274966478347778
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+ }
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+ }
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+ },
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+ "Task123_ISBI": {
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+ "Case03": {
51
+ "mask_1": {
52
+ "IoU": 0.7648935317993164,
53
+ "Dice": 0.8667871356010437
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+ }
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+ },
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+ "Case08": {
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+ "mask_1": {
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+ "IoU": 0.7688853144645691,
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+ "Dice": 0.8693444132804871
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+ }
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+ },
62
+ "Case12": {
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+ "mask_1": {
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+ "IoU": 0.7636995315551758,
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+ "Dice": 0.8660199642181396
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+ }
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+ },
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+ "Case15": {
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+ "mask_1": {
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+ "IoU": 0.766016960144043,
71
+ "Dice": 0.867508053779602
72
+ }
73
+ },
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+ "Case18": {
75
+ "mask_1": {
76
+ "IoU": 0.751737117767334,
77
+ "Dice": 0.8582761883735657
78
+ }
79
+ },
80
+ "Case26": {
81
+ "mask_1": {
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+ "IoU": 0.749495804309845,
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+ "Dice": 0.8568134903907776
84
+ }
85
+ }
86
+ },
87
+ "Task124_DecathProst": {
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+ "Case00": {
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+ "mask_1": {
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+ "IoU": 0.7955697774887085,
91
+ "Dice": 0.8861474394798279
92
+ }
93
+ },
94
+ "Case04": {
95
+ "mask_1": {
96
+ "IoU": 0.7908786535263062,
97
+ "Dice": 0.8832297921180725
98
+ }
99
+ },
100
+ "Case14": {
101
+ "mask_1": {
102
+ "IoU": 0.7870696187019348,
103
+ "Dice": 0.8808494210243225
104
+ }
105
+ },
106
+ "Case20": {
107
+ "mask_1": {
108
+ "IoU": 0.7664221525192261,
109
+ "Dice": 0.8677678108215332
110
+ }
111
+ },
112
+ "Case25": {
113
+ "mask_1": {
114
+ "IoU": 0.7917458415031433,
115
+ "Dice": 0.8837702870368958
116
+ }
117
+ },
118
+ "Case31": {
119
+ "mask_1": {
120
+ "IoU": 0.7628431916236877,
121
+ "Dice": 0.8654691576957703
122
+ }
123
+ },
124
+ "Case42": {
125
+ "mask_1": {
126
+ "IoU": 0.7565059065818787,
127
+ "Dice": 0.8613758683204651
128
+ }
129
+ }
130
+ }
131
+ }
132
+ }
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/model_summary.csv ADDED
@@ -0,0 +1,10 @@
 
 
 
 
 
 
 
 
 
 
 
1
+ network total nr. of parameters trainable parameters model size [in MB] 0
2
+ nnUNetTrainerEWC
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+ 29966112
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+ 29966112
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+ 114.312
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+ Multi Head Network with task specific heads
7
+ 29971872
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+ 29971872
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+ 114.334
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+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv ADDED
@@ -0,0 +1,104 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ trainer network overall train order trained on trained on fold used head for eval eval on task metric seg mask mean +/- std mean +/- std [in %] checkpoint 0
2
+ nnUNetTrainerEWC
3
+ 2d
4
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
5
+ Task121_UCL -- Task122_I2CVB
6
+ 0
7
+ Task121_UCL
8
+ Task121_UCL
9
+ IoU
10
+ mask_1
11
+ 0.7253 +/- 0.0102
12
+ 72.53% +/- 1.02%
13
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
14
+ nnUNetTrainerEWC
15
+ 2d
16
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
17
+ Task121_UCL -- Task122_I2CVB
18
+ 0
19
+ Task121_UCL
20
+ Task121_UCL
21
+ Dice
22
+ mask_1
23
+ 0.8408 +/- 0.0069
24
+ 84.08% +/- 0.69%
25
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+
27
+ nnUNetTrainerEWC
28
+ 2d
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+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
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+ Task121_UCL -- Task122_I2CVB
31
+ 0
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+ Task122_I2CVB
33
+ Task122_I2CVB
34
+ IoU
35
+ mask_1
36
+ 0.6904 +/- 0.0146
37
+ 69.04% +/- 1.46%
38
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+
40
+ nnUNetTrainerEWC
41
+ 2d
42
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
43
+ Task121_UCL -- Task122_I2CVB
44
+ 0
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+ Task122_I2CVB
46
+ Task122_I2CVB
47
+ Dice
48
+ mask_1
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+ 0.8168 +/- 0.0103
50
+ 81.68% +/- 1.03%
51
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+
53
+ nnUNetTrainerEWC
54
+ 2d
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+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
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+ Task121_UCL -- Task122_I2CVB
57
+ 0
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+ Task122_I2CVB
59
+ Task123_ISBI
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+ IoU
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+ mask_1
62
+ 0.7797 +/- 0.0050
63
+ 77.97% +/- 0.50%
64
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+
66
+ nnUNetTrainerEWC
67
+ 2d
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+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
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+ Task121_UCL -- Task122_I2CVB
70
+ 0
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+ Task122_I2CVB
72
+ Task123_ISBI
73
+ Dice
74
+ mask_1
75
+ 0.8762 +/- 0.0032
76
+ 87.62% +/- 0.32%
77
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+
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+ nnUNetTrainerEWC
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+ 2d
81
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
82
+ Task121_UCL -- Task122_I2CVB
83
+ 0
84
+ Task122_I2CVB
85
+ Task124_DecathProst
86
+ IoU
87
+ mask_1
88
+ 0.7763 +/- 0.0067
89
+ 77.63% +/- 0.67%
90
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
91
+
92
+ nnUNetTrainerEWC
93
+ 2d
94
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
95
+ Task121_UCL -- Task122_I2CVB
96
+ 0
97
+ Task122_I2CVB
98
+ Task124_DecathProst
99
+ Dice
100
+ mask_1
101
+ 0.8740 +/- 0.0042
102
+ 87.40% +/- 0.42%
103
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
104
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt ADDED
@@ -0,0 +1,28 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluation performed after Epoch 250, trained on fold 0.
2
+
3
+ The nnUNetTrainerEWC model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst has been used for this evaluation with the Task122_I2CVB head. The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+
5
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and IoU as metric:
6
+ mean (+/- std): 0.725331981976827 +/- 0.01022047233686863
7
+
8
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and Dice as metric:
9
+ mean (+/- std): 0.8407620191574097 +/- 0.00688519732916141
10
+
11
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and IoU as metric:
12
+ mean (+/- std): 0.6904028505086899 +/- 0.014619795272973588
13
+
14
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and Dice as metric:
15
+ mean (+/- std): 0.8167613744735718 +/- 0.010257847355083368
16
+
17
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and IoU as metric:
18
+ mean (+/- std): 0.7797381778558096 +/- 0.00501543466695585
19
+
20
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and Dice as metric:
21
+ mean (+/- std): 0.8762302895387014 +/- 0.0031643372020166045
22
+
23
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and IoU as metric:
24
+ mean (+/- std): 0.7762761882373265 +/- 0.006661105591470465
25
+
26
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and Dice as metric:
27
+ mean (+/- std): 0.8740331530570984 +/- 0.004218117421964211
28
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/training_log_2024_10_24_00_11_19.txt ADDED
@@ -0,0 +1,32 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Starting...
2
+ 2024-10-24 00:11:19.062857: The nnUNetTrainerEWC model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst will be used for this evaluation with the Task122_I2CVB head.
3
+ 2024-10-24 00:11:19.063079: The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+ 2024-10-24 00:11:19.063115: Start performing evaluation on fold 0 for the following tasks: Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst.
5
+
6
+ 2024-10-24 00:11:19.065813: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task121_UCL/splits_final.pkl
7
+ 2024-10-24 00:11:19.065898: The split file contains 5 splits.
8
+ 2024-10-24 00:11:19.065936: Desired fold for training: 0
9
+ 2024-10-24 00:11:19.065965: This split has 10 training and 3 validation cases.
10
+ 2024-10-24 00:11:20.144503: Performing validation with validation data from task Task121_UCL.
11
+ 2024-10-24 00:11:29.910028: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task122_I2CVB/splits_final.pkl
12
+ 2024-10-24 00:11:29.910975: The split file contains 5 splits.
13
+ 2024-10-24 00:11:29.911176: Desired fold for training: 0
14
+ 2024-10-24 00:11:29.911233: This split has 15 training and 4 validation cases.
15
+ 2024-10-24 00:11:32.587844: Performing validation with validation data from task Task122_I2CVB.
16
+ 2024-10-24 00:11:38.120471: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task123_ISBI/splits_final.pkl
17
+ 2024-10-24 00:11:38.120651: The split file contains 5 splits.
18
+ 2024-10-24 00:11:38.120693: Desired fold for training: 0
19
+ 2024-10-24 00:11:38.120723: This split has 24 training and 6 validation cases.
20
+ 2024-10-24 00:11:40.446798: Performing validation with validation data from task Task123_ISBI.
21
+ 2024-10-24 00:11:45.787484: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task124_DecathProst/splits_final.pkl
22
+ 2024-10-24 00:11:45.787793: The split file contains 5 splits.
23
+ 2024-10-24 00:11:45.787852: Desired fold for training: 0
24
+ 2024-10-24 00:11:45.787886: This split has 25 training and 7 validation cases.
25
+ 2024-10-24 00:11:48.241759: Performing validation with validation data from task Task124_DecathProst.
26
+ 2024-10-24 00:11:53.689679: Finished with the evaluation on fold 0. The results can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics.csv or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json.
27
+
28
+ 2024-10-24 00:11:53.690497: Summarizing the results (calculate mean and std)..
29
+ 2024-10-24 00:11:53.716891: The summarized results of the evaluation on fold 0 can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv.
30
+
31
+
32
+ 2024-10-24 00:11:53.717036: The Evaluation took 34.65 seconds.
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.csv ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Epoch Task subject_id seg_mask metric value
2
+ epoch_250 Task121_UCL Case01 mask_1 IoU 0.7115181088447571
3
+ epoch_250 Task121_UCL Case01 mask_1 Dice 0.8314467668533325
4
+ epoch_250 Task121_UCL Case32 mask_1 IoU 0.735922634601593
5
+ epoch_250 Task121_UCL Case32 mask_1 Dice 0.8478749394416809
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+ epoch_250 Task121_UCL Case34 mask_1 IoU 0.7285552024841309
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+ epoch_250 Task121_UCL Case34 mask_1 Dice 0.8429643511772156
8
+ epoch_250 Task122_I2CVB Case03 mask_1 IoU 0.6925685405731201
9
+ epoch_250 Task122_I2CVB Case03 mask_1 Dice 0.8183639645576477
10
+ epoch_250 Task122_I2CVB Case08 mask_1 IoU 0.6685339212417603
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+ epoch_250 Task122_I2CVB Case08 mask_1 Dice 0.8013429045677185
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+ epoch_250 Task122_I2CVB Case13 mask_1 IoU 0.6908230185508728
13
+ epoch_250 Task122_I2CVB Case13 mask_1 Dice 0.8171440958976746
14
+ epoch_250 Task122_I2CVB Case15 mask_1 IoU 0.7096859216690063
15
+ epoch_250 Task122_I2CVB Case15 mask_1 Dice 0.8301945328712463
16
+ epoch_250 Task123_ISBI Case03 mask_1 IoU 0.7778480052947998
17
+ epoch_250 Task123_ISBI Case03 mask_1 Dice 0.8750444650650024
18
+ epoch_250 Task123_ISBI Case08 mask_1 IoU 0.7888094782829285
19
+ epoch_250 Task123_ISBI Case08 mask_1 Dice 0.8819379806518555
20
+ epoch_250 Task123_ISBI Case12 mask_1 IoU 0.7804704904556274
21
+ epoch_250 Task123_ISBI Case12 mask_1 Dice 0.8767014145851135
22
+ epoch_250 Task123_ISBI Case15 mask_1 IoU 0.7717055678367615
23
+ epoch_250 Task123_ISBI Case15 mask_1 Dice 0.8711442351341248
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+ epoch_250 Task123_ISBI Case18 mask_1 IoU 0.7798032164573669
25
+ epoch_250 Task123_ISBI Case18 mask_1 Dice 0.8762802481651306
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+ epoch_250 Task123_ISBI Case26 mask_1 IoU 0.779792308807373
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+ epoch_250 Task123_ISBI Case26 mask_1 Dice 0.8762733936309814
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+ epoch_250 Task124_DecathProst Case00 mask_1 IoU 0.7730327248573303
29
+ epoch_250 Task124_DecathProst Case00 mask_1 Dice 0.8719892501831055
30
+ epoch_250 Task124_DecathProst Case04 mask_1 IoU 0.7658898830413818
31
+ epoch_250 Task124_DecathProst Case04 mask_1 Dice 0.8674265742301941
32
+ epoch_250 Task124_DecathProst Case14 mask_1 IoU 0.7742968201637268
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+ epoch_250 Task124_DecathProst Case14 mask_1 Dice 0.8727928996086121
34
+ epoch_250 Task124_DecathProst Case20 mask_1 IoU 0.7755655646324158
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+ epoch_250 Task124_DecathProst Case20 mask_1 Dice 0.8735983371734619
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+ epoch_250 Task124_DecathProst Case25 mask_1 IoU 0.7847083210945129
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+ epoch_250 Task124_DecathProst Case25 mask_1 Dice 0.8793686628341675
38
+ epoch_250 Task124_DecathProst Case31 mask_1 IoU 0.7867608666419983
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+ epoch_250 Task124_DecathProst Case31 mask_1 Dice 0.8806560039520264
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+ epoch_250 Task124_DecathProst Case42 mask_1 IoU 0.7736791372299194
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+ epoch_250 Task124_DecathProst Case42 mask_1 Dice 0.8724003434181213
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json ADDED
@@ -0,0 +1,132 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "epoch_250": {
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+ "Task121_UCL": {
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+ "Case01": {
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+ "mask_1": {
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+ "IoU": 0.7115181088447571,
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+ "Dice": 0.8314467668533325
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+ },
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+ "Case32": {
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+ "mask_1": {
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+ "IoU": 0.735922634601593,
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+ "Dice": 0.8478749394416809
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+ }
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+ },
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+ "Case34": {
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+ "mask_1": {
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+ "IoU": 0.7285552024841309,
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+ "Dice": 0.8429643511772156
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+ }
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+ },
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+ "Task122_I2CVB": {
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+ "Case03": {
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+ "mask_1": {
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+ "IoU": 0.6925685405731201,
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+ "Dice": 0.8183639645576477
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+ },
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+ "Case08": {
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+ "mask_1": {
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+ "IoU": 0.6685339212417603,
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+ "Case13": {
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+ "IoU": 0.6908230185508728,
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+ "Dice": 0.8171440958976746
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+ "Case15": {
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+ "IoU": 0.7096859216690063,
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+ "Dice": 0.8301945328712463
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+ },
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+ "Task123_ISBI": {
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+ "Case03": {
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+ "mask_1": {
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+ "IoU": 0.7778480052947998,
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+ "Dice": 0.8750444650650024
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+ }
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+ },
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+ "Case08": {
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+ "mask_1": {
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+ "IoU": 0.7888094782829285,
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+ "Dice": 0.8819379806518555
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+ }
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+ },
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+ "Case12": {
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+ "mask_1": {
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+ "IoU": 0.7804704904556274,
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+ "Dice": 0.8767014145851135
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+ }
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+ },
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+ "Case15": {
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+ "mask_1": {
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+ "IoU": 0.7717055678367615,
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+ "Dice": 0.8711442351341248
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+ }
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+ },
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+ "Case18": {
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+ "mask_1": {
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+ "IoU": 0.7798032164573669,
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+ "Dice": 0.8762802481651306
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+ }
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+ },
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+ "Case26": {
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+ "mask_1": {
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+ "IoU": 0.779792308807373,
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+ "Dice": 0.8762733936309814
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+ }
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+ }
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+ },
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+ "Task124_DecathProst": {
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+ "Case00": {
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+ "mask_1": {
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+ "IoU": 0.7730327248573303,
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+ "Dice": 0.8719892501831055
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+ }
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+ "Case04": {
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+ "mask_1": {
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+ "IoU": 0.7658898830413818,
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+ "Dice": 0.8674265742301941
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+ }
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+ },
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+ "Case14": {
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+ "mask_1": {
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+ "IoU": 0.7742968201637268,
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+ "Dice": 0.8727928996086121
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+ "Case20": {
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+ "mask_1": {
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+ "IoU": 0.7755655646324158,
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+ "Dice": 0.8735983371734619
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+ }
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+ },
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+ "Case25": {
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+ "mask_1": {
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+ "IoU": 0.7847083210945129,
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+ "Dice": 0.8793686628341675
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+ }
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+ },
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+ "Case31": {
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+ "mask_1": {
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+ "IoU": 0.7867608666419983,
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+ "Dice": 0.8806560039520264
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+ }
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+ },
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+ "Case42": {
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+ "mask_1": {
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+ "IoU": 0.7736791372299194,
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+ "Dice": 0.8724003434181213
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+ }
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+ }
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+ }
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+ }
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+ }
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/model_summary.csv ADDED
@@ -0,0 +1,10 @@
 
 
 
 
 
 
 
 
 
 
 
1
+ network total nr. of parameters trainable parameters model size [in MB] 0
2
+ nnUNetTrainerEWC
3
+ 29966112
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+ 29966112
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+ 114.312
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+ Multi Head Network with task specific heads
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+ 29971872
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+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.csv ADDED
@@ -0,0 +1,104 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ trainer network overall train order trained on trained on fold used head for eval eval on task metric seg mask mean +/- std mean +/- std [in %] checkpoint 0
2
+ nnUNetTrainerEWC
3
+ 2d
4
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
5
+ Task121_UCL -- Task122_I2CVB
6
+ 0
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+ Task122_I2CVB
8
+ Task121_UCL
9
+ IoU
10
+ mask_1
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+ 0.7253 +/- 0.0102
12
+ 72.53% +/- 1.02%
13
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+ nnUNetTrainerEWC
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+ 2d
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+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
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+ Task121_UCL -- Task122_I2CVB
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+ 0
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+ Task122_I2CVB
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+ Task121_UCL
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+ Dice
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+ mask_1
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+ 0.8408 +/- 0.0069
24
+ 84.08% +/- 0.69%
25
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+
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+ nnUNetTrainerEWC
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+ 2d
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+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
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+ Task121_UCL -- Task122_I2CVB
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+ 0
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+ Task122_I2CVB
33
+ Task122_I2CVB
34
+ IoU
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+ mask_1
36
+ 0.6904 +/- 0.0146
37
+ 69.04% +/- 1.46%
38
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+
40
+ nnUNetTrainerEWC
41
+ 2d
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+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
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+ Task121_UCL -- Task122_I2CVB
44
+ 0
45
+ Task122_I2CVB
46
+ Task122_I2CVB
47
+ Dice
48
+ mask_1
49
+ 0.8168 +/- 0.0103
50
+ 81.68% +/- 1.03%
51
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
52
+
53
+ nnUNetTrainerEWC
54
+ 2d
55
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
56
+ Task121_UCL -- Task122_I2CVB
57
+ 0
58
+ Task122_I2CVB
59
+ Task123_ISBI
60
+ IoU
61
+ mask_1
62
+ 0.7797 +/- 0.0050
63
+ 77.97% +/- 0.50%
64
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
65
+
66
+ nnUNetTrainerEWC
67
+ 2d
68
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
69
+ Task121_UCL -- Task122_I2CVB
70
+ 0
71
+ Task122_I2CVB
72
+ Task123_ISBI
73
+ Dice
74
+ mask_1
75
+ 0.8762 +/- 0.0032
76
+ 87.62% +/- 0.32%
77
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
78
+
79
+ nnUNetTrainerEWC
80
+ 2d
81
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
82
+ Task121_UCL -- Task122_I2CVB
83
+ 0
84
+ Task122_I2CVB
85
+ Task124_DecathProst
86
+ IoU
87
+ mask_1
88
+ 0.7763 +/- 0.0067
89
+ 77.63% +/- 0.67%
90
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
91
+
92
+ nnUNetTrainerEWC
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+ 2d
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+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
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+ Task121_UCL -- Task122_I2CVB
96
+ 0
97
+ Task122_I2CVB
98
+ Task124_DecathProst
99
+ Dice
100
+ mask_1
101
+ 0.8740 +/- 0.0042
102
+ 87.40% +/- 0.42%
103
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
104
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.txt ADDED
@@ -0,0 +1,28 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluation performed after Epoch 250, trained on fold 0.
2
+
3
+ The nnUNetTrainerEWC model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst has been used for this evaluation with the Task122_I2CVB head. The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+
5
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and IoU as metric:
6
+ mean (+/- std): 0.7253422935803732 +/- 0.010220487712351513
7
+
8
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and Dice as metric:
9
+ mean (+/- std): 0.8407689332962036 +/- 0.006885132513598647
10
+
11
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and IoU as metric:
12
+ mean (+/- std): 0.6904028505086899 +/- 0.014619795272973588
13
+
14
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and Dice as metric:
15
+ mean (+/- std): 0.8167613744735718 +/- 0.010257847355083368
16
+
17
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and IoU as metric:
18
+ mean (+/- std): 0.7797381778558096 +/- 0.00501543466695585
19
+
20
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and Dice as metric:
21
+ mean (+/- std): 0.8762302895387014 +/- 0.0031643372020166045
22
+
23
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and IoU as metric:
24
+ mean (+/- std): 0.7762761882373265 +/- 0.006661105591470465
25
+
26
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and Dice as metric:
27
+ mean (+/- std): 0.8740331530570984 +/- 0.004218117421964211
28
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/training_log_2025_3_6_07_48_26.txt ADDED
@@ -0,0 +1,32 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Starting...
2
+ 2025-03-06 07:48:26.910773: The nnUNetTrainerEWC model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst will be used for this evaluation with the Task122_I2CVB head.
3
+ 2025-03-06 07:48:26.911035: The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+ 2025-03-06 07:48:26.911084: Start performing evaluation on fold 0 for the following tasks: Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst.
5
+
6
+ 2025-03-06 07:48:26.915812: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task121_UCL/splits_final.pkl
7
+ 2025-03-06 07:48:26.916242: The split file contains 5 splits.
8
+ 2025-03-06 07:48:26.916303: Desired fold for training: 0
9
+ 2025-03-06 07:48:26.916351: This split has 10 training and 3 validation cases.
10
+ 2025-03-06 07:48:29.068669: Performing validation with validation data from task Task121_UCL.
11
+ 2025-03-06 07:48:43.744644: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task122_I2CVB/splits_final.pkl
12
+ 2025-03-06 07:48:43.744944: The split file contains 5 splits.
13
+ 2025-03-06 07:48:43.745017: Desired fold for training: 0
14
+ 2025-03-06 07:48:43.745094: This split has 15 training and 4 validation cases.
15
+ 2025-03-06 07:48:48.749240: Performing validation with validation data from task Task122_I2CVB.
16
+ 2025-03-06 07:48:54.770425: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task123_ISBI/splits_final.pkl
17
+ 2025-03-06 07:48:54.771230: The split file contains 5 splits.
18
+ 2025-03-06 07:48:54.771599: Desired fold for training: 0
19
+ 2025-03-06 07:48:54.771936: This split has 24 training and 6 validation cases.
20
+ 2025-03-06 07:48:59.541291: Performing validation with validation data from task Task123_ISBI.
21
+ 2025-03-06 07:49:07.258443: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task124_DecathProst/splits_final.pkl
22
+ 2025-03-06 07:49:07.258708: The split file contains 5 splits.
23
+ 2025-03-06 07:49:07.258771: Desired fold for training: 0
24
+ 2025-03-06 07:49:07.258816: This split has 25 training and 7 validation cases.
25
+ 2025-03-06 07:49:11.567132: Performing validation with validation data from task Task124_DecathProst.
26
+ 2025-03-06 07:49:17.898690: Finished with the evaluation on fold 0. The results can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics.csv or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.json.
27
+
28
+ 2025-03-06 07:49:17.899149: Summarizing the results (calculate mean and std)..
29
+ 2025-03-06 07:49:17.932670: The summarized results of the evaluation on fold 0 can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.txt or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.csv.
30
+
31
+
32
+ 2025-03-06 07:49:17.933257: The Evaluation took 51.02 seconds.
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.csv ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Epoch Task subject_id seg_mask metric value
2
+ epoch_250 Task121_UCL Case01 mask_1 IoU 0.7115276455879211
3
+ epoch_250 Task121_UCL Case01 mask_1 Dice 0.831453263759613
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+ epoch_250 Task121_UCL Case32 mask_1 IoU 0.7359312176704407
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+ epoch_250 Task121_UCL Case32 mask_1 Dice 0.8478806018829346
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+ epoch_250 Task121_UCL Case34 mask_1 IoU 0.7285680174827576
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+ epoch_250 Task121_UCL Case34 mask_1 Dice 0.8429729342460632
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+ epoch_250 Task122_I2CVB Case03 mask_1 IoU 0.6925685405731201
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+ epoch_250 Task122_I2CVB Case03 mask_1 Dice 0.8183639645576477
10
+ epoch_250 Task122_I2CVB Case08 mask_1 IoU 0.6685339212417603
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+ epoch_250 Task122_I2CVB Case08 mask_1 Dice 0.8013429045677185
12
+ epoch_250 Task122_I2CVB Case13 mask_1 IoU 0.6908230185508728
13
+ epoch_250 Task122_I2CVB Case13 mask_1 Dice 0.8171440958976746
14
+ epoch_250 Task122_I2CVB Case15 mask_1 IoU 0.7096859216690063
15
+ epoch_250 Task122_I2CVB Case15 mask_1 Dice 0.8301945328712463
16
+ epoch_250 Task123_ISBI Case03 mask_1 IoU 0.7778480052947998
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+ epoch_250 Task123_ISBI Case03 mask_1 Dice 0.8750444650650024
18
+ epoch_250 Task123_ISBI Case08 mask_1 IoU 0.7888094782829285
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+ epoch_250 Task123_ISBI Case08 mask_1 Dice 0.8819379806518555
20
+ epoch_250 Task123_ISBI Case12 mask_1 IoU 0.7804704904556274
21
+ epoch_250 Task123_ISBI Case12 mask_1 Dice 0.8767014145851135
22
+ epoch_250 Task123_ISBI Case15 mask_1 IoU 0.7717055678367615
23
+ epoch_250 Task123_ISBI Case15 mask_1 Dice 0.8711442351341248
24
+ epoch_250 Task123_ISBI Case18 mask_1 IoU 0.7798032164573669
25
+ epoch_250 Task123_ISBI Case18 mask_1 Dice 0.8762802481651306
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+ epoch_250 Task123_ISBI Case26 mask_1 IoU 0.779792308807373
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+ epoch_250 Task123_ISBI Case26 mask_1 Dice 0.8762733936309814
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+ epoch_250 Task124_DecathProst Case00 mask_1 IoU 0.7730327248573303
29
+ epoch_250 Task124_DecathProst Case00 mask_1 Dice 0.8719892501831055
30
+ epoch_250 Task124_DecathProst Case04 mask_1 IoU 0.7658898830413818
31
+ epoch_250 Task124_DecathProst Case04 mask_1 Dice 0.8674265742301941
32
+ epoch_250 Task124_DecathProst Case14 mask_1 IoU 0.7742968201637268
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+ epoch_250 Task124_DecathProst Case14 mask_1 Dice 0.8727928996086121
34
+ epoch_250 Task124_DecathProst Case20 mask_1 IoU 0.7755655646324158
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+ epoch_250 Task124_DecathProst Case20 mask_1 Dice 0.8735983371734619
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+ epoch_250 Task124_DecathProst Case25 mask_1 IoU 0.7847083210945129
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+ epoch_250 Task124_DecathProst Case25 mask_1 Dice 0.8793686628341675
38
+ epoch_250 Task124_DecathProst Case31 mask_1 IoU 0.7867608666419983
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+ epoch_250 Task124_DecathProst Case31 mask_1 Dice 0.8806560039520264
40
+ epoch_250 Task124_DecathProst Case42 mask_1 IoU 0.7736791372299194
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+ epoch_250 Task124_DecathProst Case42 mask_1 Dice 0.8724003434181213
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.json ADDED
@@ -0,0 +1,132 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "epoch_250": {
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+ "Task121_UCL": {
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+ "Case01": {
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+ "mask_1": {
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+ "IoU": 0.7115276455879211,
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+ "Dice": 0.831453263759613
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+ },
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+ "Case32": {
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+ "mask_1": {
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+ "IoU": 0.7359312176704407,
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+ "Dice": 0.8478806018829346
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+ }
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+ },
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+ "Case34": {
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+ "mask_1": {
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+ "IoU": 0.7285680174827576,
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+ "Dice": 0.8429729342460632
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+ }
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+ }
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+ },
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+ "Task122_I2CVB": {
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+ "Case03": {
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+ "mask_1": {
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+ "IoU": 0.6925685405731201,
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+ "Dice": 0.8183639645576477
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+ }
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+ },
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+ "Case08": {
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+ "mask_1": {
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+ "IoU": 0.6685339212417603,
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+ "Dice": 0.8013429045677185
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+ },
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+ "Case13": {
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+ "mask_1": {
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+ "IoU": 0.6908230185508728,
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+ "Dice": 0.8171440958976746
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+ },
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+ "Case15": {
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+ "mask_1": {
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+ "IoU": 0.7096859216690063,
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+ "Dice": 0.8301945328712463
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+ }
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+ }
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+ },
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+ "Task123_ISBI": {
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+ "Case03": {
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+ "mask_1": {
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+ "IoU": 0.7778480052947998,
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+ "Dice": 0.8750444650650024
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+ }
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+ },
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+ "Case08": {
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+ "mask_1": {
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+ "IoU": 0.7888094782829285,
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+ "Dice": 0.8819379806518555
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+ }
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+ },
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+ "Case12": {
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+ "mask_1": {
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+ "IoU": 0.7804704904556274,
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+ "Dice": 0.8767014145851135
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+ }
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+ },
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+ "Case15": {
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+ "mask_1": {
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+ "IoU": 0.7717055678367615,
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+ "Dice": 0.8711442351341248
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+ }
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+ },
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+ "Case18": {
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+ "mask_1": {
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+ "IoU": 0.7798032164573669,
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+ "Dice": 0.8762802481651306
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+ }
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+ },
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+ "Case26": {
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+ "mask_1": {
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+ "IoU": 0.779792308807373,
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+ "Dice": 0.8762733936309814
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+ }
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+ }
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+ },
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+ "Task124_DecathProst": {
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+ "Case00": {
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+ "mask_1": {
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+ "IoU": 0.7730327248573303,
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+ "Dice": 0.8719892501831055
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+ }
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+ },
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+ "Case04": {
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+ "mask_1": {
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+ "IoU": 0.7658898830413818,
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+ "Dice": 0.8674265742301941
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+ }
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+ "Case14": {
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+ "mask_1": {
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+ "IoU": 0.7742968201637268,
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+ "Dice": 0.8727928996086121
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+ }
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+ "Case20": {
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+ "mask_1": {
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+ "IoU": 0.7755655646324158,
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+ "Dice": 0.8735983371734619
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+ }
111
+ },
112
+ "Case25": {
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+ "mask_1": {
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+ "IoU": 0.7847083210945129,
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+ "Dice": 0.8793686628341675
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+ }
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+ },
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+ "Case31": {
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+ "mask_1": {
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+ "IoU": 0.7867608666419983,
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+ "Dice": 0.8806560039520264
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+ }
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+ },
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+ "Case42": {
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+ "mask_1": {
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+ "IoU": 0.7736791372299194,
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+ "Dice": 0.8724003434181213
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+ }
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+ }
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+ }
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+ }
132
+ }
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/model_summary.csv ADDED
@@ -0,0 +1,10 @@
 
 
 
 
 
 
 
 
 
 
 
1
+ network total nr. of parameters trainable parameters model size [in MB] 0
2
+ nnUNetTrainerRW
3
+ 29966112
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+ 29966112
5
+ 114.312
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+ Multi Head Network with task specific heads
7
+ 29971872
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+ 29971872
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+ 114.334
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+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv ADDED
@@ -0,0 +1,104 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ trainer network overall train order trained on trained on fold used head for eval eval on task metric seg mask mean +/- std mean +/- std [in %] checkpoint 0
2
+ nnUNetTrainerRW
3
+ 2d
4
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
5
+ Task121_UCL -- Task122_I2CVB
6
+ 0
7
+ Task121_UCL
8
+ Task121_UCL
9
+ IoU
10
+ mask_1
11
+ 0.5679 +/- 0.0215
12
+ 56.79% +/- 2.15%
13
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+ nnUNetTrainerRW
15
+ 2d
16
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
17
+ Task121_UCL -- Task122_I2CVB
18
+ 0
19
+ Task121_UCL
20
+ Task121_UCL
21
+ Dice
22
+ mask_1
23
+ 0.7242 +/- 0.0176
24
+ 72.42% +/- 1.76%
25
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
26
+
27
+ nnUNetTrainerRW
28
+ 2d
29
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
30
+ Task121_UCL -- Task122_I2CVB
31
+ 0
32
+ Task122_I2CVB
33
+ Task122_I2CVB
34
+ IoU
35
+ mask_1
36
+ 0.8018 +/- 0.0166
37
+ 80.18% +/- 1.66%
38
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
39
+
40
+ nnUNetTrainerRW
41
+ 2d
42
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
43
+ Task121_UCL -- Task122_I2CVB
44
+ 0
45
+ Task122_I2CVB
46
+ Task122_I2CVB
47
+ Dice
48
+ mask_1
49
+ 0.8899 +/- 0.0103
50
+ 88.99% +/- 1.03%
51
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
52
+
53
+ nnUNetTrainerRW
54
+ 2d
55
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
56
+ Task121_UCL -- Task122_I2CVB
57
+ 0
58
+ Task122_I2CVB
59
+ Task123_ISBI
60
+ IoU
61
+ mask_1
62
+ 0.7230 +/- 0.0045
63
+ 72.30% +/- 0.45%
64
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
65
+
66
+ nnUNetTrainerRW
67
+ 2d
68
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
69
+ Task121_UCL -- Task122_I2CVB
70
+ 0
71
+ Task122_I2CVB
72
+ Task123_ISBI
73
+ Dice
74
+ mask_1
75
+ 0.8392 +/- 0.0030
76
+ 83.92% +/- 0.30%
77
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
78
+
79
+ nnUNetTrainerRW
80
+ 2d
81
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
82
+ Task121_UCL -- Task122_I2CVB
83
+ 0
84
+ Task122_I2CVB
85
+ Task124_DecathProst
86
+ IoU
87
+ mask_1
88
+ 0.6879 +/- 0.0155
89
+ 68.79% +/- 1.55%
90
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
91
+
92
+ nnUNetTrainerRW
93
+ 2d
94
+ Task121_UCL -- Task122_I2CVB -- Task123_ISBI -- Task124_DecathProst
95
+ Task121_UCL -- Task122_I2CVB
96
+ 0
97
+ Task122_I2CVB
98
+ Task124_DecathProst
99
+ Dice
100
+ mask_1
101
+ 0.8150 +/- 0.0109
102
+ 81.50% +/- 1.09%
103
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
104
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt ADDED
@@ -0,0 +1,28 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluation performed after Epoch 51, trained on fold 0.
2
+
3
+ The nnUNetTrainerRW model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst has been used for this evaluation with the Task122_I2CVB head. The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+
5
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and IoU as metric:
6
+ mean (+/- std): 0.5679497917493185 +/- 0.021496838576573127
7
+
8
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and Dice as metric:
9
+ mean (+/- std): 0.7242078185081482 +/- 0.017586647781099356
10
+
11
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and IoU as metric:
12
+ mean (+/- std): 0.8018016219139099 +/- 0.016629553445862675
13
+
14
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and Dice as metric:
15
+ mean (+/- std): 0.8899052739143372 +/- 0.010250715948676218
16
+
17
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and IoU as metric:
18
+ mean (+/- std): 0.7229857742786407 +/- 0.004478428683657694
19
+
20
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and Dice as metric:
21
+ mean (+/- std): 0.8392164806524912 +/- 0.0030150079496837944
22
+
23
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and IoU as metric:
24
+ mean (+/- std): 0.6878991893359593 +/- 0.015492627472242974
25
+
26
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and Dice as metric:
27
+ mean (+/- std): 0.814994820526668 +/- 0.010926920370879592
28
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/training_log_2024_10_23_20_19_27.txt ADDED
@@ -0,0 +1,32 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Starting...
2
+ 2024-10-23 20:19:27.074603: The nnUNetTrainerRW model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst will be used for this evaluation with the Task122_I2CVB head.
3
+ 2024-10-23 20:19:27.074812: The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+ 2024-10-23 20:19:27.074852: Start performing evaluation on fold 0 for the following tasks: Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst.
5
+
6
+ 2024-10-23 20:19:27.077489: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task121_UCL/splits_final.pkl
7
+ 2024-10-23 20:19:27.077574: The split file contains 5 splits.
8
+ 2024-10-23 20:19:27.077612: Desired fold for training: 0
9
+ 2024-10-23 20:19:27.077641: This split has 10 training and 3 validation cases.
10
+ 2024-10-23 20:19:28.246869: Performing validation with validation data from task Task121_UCL.
11
+ 2024-10-23 20:19:44.414184: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task122_I2CVB/splits_final.pkl
12
+ 2024-10-23 20:19:44.414451: The split file contains 5 splits.
13
+ 2024-10-23 20:19:44.414523: Desired fold for training: 0
14
+ 2024-10-23 20:19:44.414587: This split has 15 training and 4 validation cases.
15
+ 2024-10-23 20:19:46.896511: Performing validation with validation data from task Task122_I2CVB.
16
+ 2024-10-23 20:19:52.965996: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task123_ISBI/splits_final.pkl
17
+ 2024-10-23 20:19:52.966220: The split file contains 5 splits.
18
+ 2024-10-23 20:19:52.966271: Desired fold for training: 0
19
+ 2024-10-23 20:19:52.966308: This split has 24 training and 6 validation cases.
20
+ 2024-10-23 20:19:55.710758: Performing validation with validation data from task Task123_ISBI.
21
+ 2024-10-23 20:20:01.841022: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task124_DecathProst/splits_final.pkl
22
+ 2024-10-23 20:20:01.841301: The split file contains 5 splits.
23
+ 2024-10-23 20:20:01.841354: Desired fold for training: 0
24
+ 2024-10-23 20:20:01.841409: This split has 25 training and 7 validation cases.
25
+ 2024-10-23 20:20:04.701817: Performing validation with validation data from task Task124_DecathProst.
26
+ 2024-10-23 20:20:11.034779: Finished with the evaluation on fold 0. The results can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics.csv or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json.
27
+
28
+ 2024-10-23 20:20:11.036031: Summarizing the results (calculate mean and std)..
29
+ 2024-10-23 20:20:11.083238: The summarized results of the evaluation on fold 0 can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv.
30
+
31
+
32
+ 2024-10-23 20:20:11.083416: The Evaluation took 44.01 seconds.
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.csv ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Epoch Task subject_id seg_mask metric value
2
+ epoch_51 Task121_UCL Case01 mask_1 IoU 0.5391873121261597
3
+ epoch_51 Task121_UCL Case01 mask_1 Dice 0.7006129622459412
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+ epoch_51 Task121_UCL Case32 mask_1 IoU 0.5738039612770081
5
+ epoch_51 Task121_UCL Case32 mask_1 Dice 0.7291936874389648
6
+ epoch_51 Task121_UCL Case34 mask_1 IoU 0.5908581018447876
7
+ epoch_51 Task121_UCL Case34 mask_1 Dice 0.7428168058395386
8
+ epoch_51 Task122_I2CVB Case03 mask_1 IoU 0.804739236831665
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+ epoch_51 Task122_I2CVB Case03 mask_1 Dice 0.8918066620826721
10
+ epoch_51 Task122_I2CVB Case08 mask_1 IoU 0.7782036662101746
11
+ epoch_51 Task122_I2CVB Case08 mask_1 Dice 0.8752694129943848
12
+ epoch_51 Task122_I2CVB Case13 mask_1 IoU 0.7993401885032654
13
+ epoch_51 Task122_I2CVB Case13 mask_1 Dice 0.8884814381599426
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+ epoch_51 Task122_I2CVB Case15 mask_1 IoU 0.8249233961105347
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+ epoch_51 Task122_I2CVB Case15 mask_1 Dice 0.9040635824203491
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+ epoch_51 Task123_ISBI Case03 mask_1 IoU 0.7182675004005432
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+ epoch_51 Task123_ISBI Case03 mask_1 Dice 0.8360368609428406
18
+ epoch_51 Task123_ISBI Case08 mask_1 IoU 0.7234225273132324
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+ epoch_51 Task123_ISBI Case08 mask_1 Dice 0.8395184874534607
20
+ epoch_51 Task123_ISBI Case12 mask_1 IoU 0.7175019383430481
21
+ epoch_51 Task123_ISBI Case12 mask_1 Dice 0.8355180621147156
22
+ epoch_51 Task123_ISBI Case15 mask_1 IoU 0.7216877937316895
23
+ epoch_51 Task123_ISBI Case15 mask_1 Dice 0.8383492231369019
24
+ epoch_51 Task123_ISBI Case18 mask_1 IoU 0.726947546005249
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+ epoch_51 Task123_ISBI Case18 mask_1 Dice 0.8418872356414795
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+ epoch_51 Task123_ISBI Case26 mask_1 IoU 0.7300873398780823
27
+ epoch_51 Task123_ISBI Case26 mask_1 Dice 0.8439890146255493
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+ epoch_51 Task124_DecathProst Case00 mask_1 IoU 0.6924690008163452
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+ epoch_51 Task124_DecathProst Case00 mask_1 Dice 0.8182944655418396
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+ epoch_51 Task124_DecathProst Case04 mask_1 IoU 0.6663919687271118
31
+ epoch_51 Task124_DecathProst Case04 mask_1 Dice 0.7998021841049194
32
+ epoch_51 Task124_DecathProst Case14 mask_1 IoU 0.6944931149482727
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+ epoch_51 Task124_DecathProst Case14 mask_1 Dice 0.8197060227394104
34
+ epoch_51 Task124_DecathProst Case20 mask_1 IoU 0.6918301582336426
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+ epoch_51 Task124_DecathProst Case20 mask_1 Dice 0.8178482055664062
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+ epoch_51 Task124_DecathProst Case25 mask_1 IoU 0.6968212723731995
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+ epoch_51 Task124_DecathProst Case25 mask_1 Dice 0.8213254809379578
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+ epoch_51 Task124_DecathProst Case31 mask_1 IoU 0.7096120119094849
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+ epoch_51 Task124_DecathProst Case31 mask_1 Dice 0.830143928527832
40
+ epoch_51 Task124_DecathProst Case42 mask_1 IoU 0.6636767983436584
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+ epoch_51 Task124_DecathProst Case42 mask_1 Dice 0.7978434562683105
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json ADDED
@@ -0,0 +1,132 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "epoch_51": {
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+ "Task121_UCL": {
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+ "Case01": {
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+ "mask_1": {
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+ "IoU": 0.5391873121261597,
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+ "Dice": 0.7006129622459412
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+ },
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+ "Case32": {
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+ "mask_1": {
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+ "IoU": 0.5738039612770081,
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+ "Dice": 0.7291936874389648
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+ },
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+ "Case34": {
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+ "mask_1": {
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+ "IoU": 0.5908581018447876,
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+ "Dice": 0.7428168058395386
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+ }
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+ },
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+ "Task122_I2CVB": {
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+ "Case03": {
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+ "mask_1": {
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+ "IoU": 0.804739236831665,
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+ "Dice": 0.8918066620826721
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+ },
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+ "Case08": {
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+ "mask_1": {
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+ "IoU": 0.7782036662101746,
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+ "Case13": {
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+ "mask_1": {
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+ "IoU": 0.7993401885032654,
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+ "Dice": 0.8884814381599426
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+ "Case15": {
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+ "IoU": 0.8249233961105347,
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+ "Dice": 0.9040635824203491
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+ }
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+ }
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+ },
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+ "Task123_ISBI": {
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+ "Case03": {
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+ "mask_1": {
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+ "IoU": 0.7182675004005432,
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+ "Dice": 0.8360368609428406
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+ }
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+ },
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+ "Case08": {
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+ "mask_1": {
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+ "IoU": 0.7234225273132324,
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+ "Dice": 0.8395184874534607
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+ }
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+ },
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+ "Case12": {
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+ "mask_1": {
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+ "IoU": 0.7175019383430481,
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+ "Dice": 0.8355180621147156
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+ }
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+ },
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+ "Case15": {
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+ "mask_1": {
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+ "IoU": 0.7216877937316895,
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+ "Dice": 0.8383492231369019
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+ }
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+ },
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+ "Case18": {
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+ "mask_1": {
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+ "IoU": 0.726947546005249,
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+ "Dice": 0.8418872356414795
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+ }
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+ },
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+ "Case26": {
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+ "mask_1": {
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+ "IoU": 0.7300873398780823,
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+ "Dice": 0.8439890146255493
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+ }
85
+ }
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+ },
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+ "Task124_DecathProst": {
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+ "Case00": {
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+ "mask_1": {
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+ "IoU": 0.6924690008163452,
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+ "Dice": 0.8182944655418396
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+ }
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+ },
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+ "Case04": {
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+ "mask_1": {
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+ "IoU": 0.6663919687271118,
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+ "Dice": 0.7998021841049194
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+ }
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+ },
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+ "Case14": {
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+ "mask_1": {
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+ "IoU": 0.6944931149482727,
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+ "Dice": 0.8197060227394104
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+ }
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+ },
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+ "Case20": {
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+ "mask_1": {
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+ "Dice": 0.8178482055664062
110
+ }
111
+ },
112
+ "Case25": {
113
+ "mask_1": {
114
+ "IoU": 0.6968212723731995,
115
+ "Dice": 0.8213254809379578
116
+ }
117
+ },
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+ "Case31": {
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+ "mask_1": {
120
+ "IoU": 0.7096120119094849,
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+ "Dice": 0.830143928527832
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+ }
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+ },
124
+ "Case42": {
125
+ "mask_1": {
126
+ "IoU": 0.6636767983436584,
127
+ "Dice": 0.7978434562683105
128
+ }
129
+ }
130
+ }
131
+ }
132
+ }
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/model_summary.csv ADDED
@@ -0,0 +1,10 @@
 
 
 
 
 
 
 
 
 
 
 
1
+ network total nr. of parameters trainable parameters model size [in MB] 0
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+ nnUNetTrainerRW
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+ Multi Head Network with task specific heads
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baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.csv ADDED
@@ -0,0 +1,104 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ trainer network overall train order trained on trained on fold used head for eval eval on task metric seg mask mean +/- std mean +/- std [in %] checkpoint 0
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+ nnUNetTrainerRW
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+ 2d
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+ 0
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+ 0.5684 +/- 0.0215
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+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+ nnUNetTrainerRW
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+ Task121_UCL -- Task122_I2CVB
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+ 0
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+ Dice
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+ 0.7245 +/- 0.0176
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+
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+ 0
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+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
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+ 0
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+ 0
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73
+ Dice
74
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+ 0.8392 +/- 0.0030
76
+ 83.92% +/- 0.30%
77
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+
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+ 0
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103
+ /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model
104
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.txt ADDED
@@ -0,0 +1,28 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluation performed after Epoch 51, trained on fold 0.
2
+
3
+ The nnUNetTrainerRW model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst has been used for this evaluation with the Task122_I2CVB head. The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+
5
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and IoU as metric:
6
+ mean (+/- std): 0.5683601299921671 +/- 0.021467510430370717
7
+
8
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and Dice as metric:
9
+ mean (+/- std): 0.7245424191157023 +/- 0.017553663031996285
10
+
11
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and IoU as metric:
12
+ mean (+/- std): 0.8018016219139099 +/- 0.016629553445862675
13
+
14
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and Dice as metric:
15
+ mean (+/- std): 0.8899052739143372 +/- 0.010250715948676218
16
+
17
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and IoU as metric:
18
+ mean (+/- std): 0.7229857742786407 +/- 0.004478428683657694
19
+
20
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and Dice as metric:
21
+ mean (+/- std): 0.8392164806524912 +/- 0.0030150079496837944
22
+
23
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and IoU as metric:
24
+ mean (+/- std): 0.6878991893359593 +/- 0.015492627472242974
25
+
26
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and Dice as metric:
27
+ mean (+/- std): 0.814994820526668 +/- 0.010926920370879592
28
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/training_log_2025_3_6_07_47_32.txt ADDED
@@ -0,0 +1,32 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Starting...
2
+ 2025-03-06 07:47:32.183672: The nnUNetTrainerRW model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst will be used for this evaluation with the Task122_I2CVB head.
3
+ 2025-03-06 07:47:32.183913: The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+ 2025-03-06 07:47:32.183959: Start performing evaluation on fold 0 for the following tasks: Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst.
5
+
6
+ 2025-03-06 07:47:32.187425: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task121_UCL/splits_final.pkl
7
+ 2025-03-06 07:47:32.187541: The split file contains 5 splits.
8
+ 2025-03-06 07:47:32.187592: Desired fold for training: 0
9
+ 2025-03-06 07:47:32.187633: This split has 10 training and 3 validation cases.
10
+ 2025-03-06 07:47:34.288141: Performing validation with validation data from task Task121_UCL.
11
+ 2025-03-06 07:47:55.350411: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task122_I2CVB/splits_final.pkl
12
+ 2025-03-06 07:47:55.353506: The split file contains 5 splits.
13
+ 2025-03-06 07:47:55.353644: Desired fold for training: 0
14
+ 2025-03-06 07:47:55.353790: This split has 15 training and 4 validation cases.
15
+ 2025-03-06 07:47:59.424367: Performing validation with validation data from task Task122_I2CVB.
16
+ 2025-03-06 07:48:06.669816: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task123_ISBI/splits_final.pkl
17
+ 2025-03-06 07:48:06.670118: The split file contains 5 splits.
18
+ 2025-03-06 07:48:06.670180: Desired fold for training: 0
19
+ 2025-03-06 07:48:06.670226: This split has 24 training and 6 validation cases.
20
+ 2025-03-06 07:48:10.431160: Performing validation with validation data from task Task123_ISBI.
21
+ 2025-03-06 07:48:17.440346: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task124_DecathProst/splits_final.pkl
22
+ 2025-03-06 07:48:17.440669: The split file contains 5 splits.
23
+ 2025-03-06 07:48:17.440744: Desired fold for training: 0
24
+ 2025-03-06 07:48:17.440807: This split has 25 training and 7 validation cases.
25
+ 2025-03-06 07:48:21.561859: Performing validation with validation data from task Task124_DecathProst.
26
+ 2025-03-06 07:48:28.029435: Finished with the evaluation on fold 0. The results can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics.csv or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.json.
27
+
28
+ 2025-03-06 07:48:28.029662: Summarizing the results (calculate mean and std)..
29
+ 2025-03-06 07:48:28.053306: The summarized results of the evaluation on fold 0 can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.txt or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.csv.
30
+
31
+
32
+ 2025-03-06 07:48:28.053405: The Evaluation took 55.87 seconds.
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.csv ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Epoch Task subject_id seg_mask metric value
2
+ epoch_51 Task121_UCL Case01 mask_1 IoU 0.5396286249160767
3
+ epoch_51 Task121_UCL Case01 mask_1 Dice 0.7009854316711426
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+ epoch_51 Task121_UCL Case32 mask_1 IoU 0.5742313861846924
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+ epoch_51 Task121_UCL Case32 mask_1 Dice 0.7295387387275696
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+ epoch_51 Task121_UCL Case34 mask_1 IoU 0.5912203788757324
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+ epoch_51 Task121_UCL Case34 mask_1 Dice 0.7431030869483948
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+ epoch_51 Task122_I2CVB Case03 mask_1 IoU 0.804739236831665
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+ epoch_51 Task122_I2CVB Case03 mask_1 Dice 0.8918066620826721
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+ epoch_51 Task122_I2CVB Case08 mask_1 IoU 0.7782036662101746
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+ epoch_51 Task122_I2CVB Case08 mask_1 Dice 0.8752694129943848
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+ epoch_51 Task122_I2CVB Case13 mask_1 IoU 0.7993401885032654
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+ epoch_51 Task122_I2CVB Case13 mask_1 Dice 0.8884814381599426
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+ epoch_51 Task122_I2CVB Case15 mask_1 IoU 0.8249233961105347
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+ epoch_51 Task122_I2CVB Case15 mask_1 Dice 0.9040635824203491
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+ epoch_51 Task123_ISBI Case03 mask_1 IoU 0.7182675004005432
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+ epoch_51 Task123_ISBI Case03 mask_1 Dice 0.8360368609428406
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+ epoch_51 Task123_ISBI Case08 mask_1 IoU 0.7234225273132324
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+ epoch_51 Task123_ISBI Case08 mask_1 Dice 0.8395184874534607
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+ epoch_51 Task123_ISBI Case12 mask_1 IoU 0.7175019383430481
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+ epoch_51 Task123_ISBI Case12 mask_1 Dice 0.8355180621147156
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+ epoch_51 Task123_ISBI Case15 mask_1 IoU 0.7216877937316895
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+ epoch_51 Task123_ISBI Case15 mask_1 Dice 0.8383492231369019
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+ epoch_51 Task123_ISBI Case18 mask_1 IoU 0.726947546005249
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+ epoch_51 Task123_ISBI Case18 mask_1 Dice 0.8418872356414795
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+ epoch_51 Task123_ISBI Case26 mask_1 IoU 0.7300873398780823
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+ epoch_51 Task123_ISBI Case26 mask_1 Dice 0.8439890146255493
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+ epoch_51 Task124_DecathProst Case00 mask_1 IoU 0.6924690008163452
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+ epoch_51 Task124_DecathProst Case00 mask_1 Dice 0.8182944655418396
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+ epoch_51 Task124_DecathProst Case04 mask_1 IoU 0.6663919687271118
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+ epoch_51 Task124_DecathProst Case04 mask_1 Dice 0.7998021841049194
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+ epoch_51 Task124_DecathProst Case14 mask_1 IoU 0.6944931149482727
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+ epoch_51 Task124_DecathProst Case14 mask_1 Dice 0.8197060227394104
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+ epoch_51 Task124_DecathProst Case20 mask_1 IoU 0.6918301582336426
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+ epoch_51 Task124_DecathProst Case20 mask_1 Dice 0.8178482055664062
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+ epoch_51 Task124_DecathProst Case25 mask_1 IoU 0.6968212723731995
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+ epoch_51 Task124_DecathProst Case25 mask_1 Dice 0.8213254809379578
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+ epoch_51 Task124_DecathProst Case31 mask_1 IoU 0.7096120119094849
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+ epoch_51 Task124_DecathProst Case31 mask_1 Dice 0.830143928527832
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+ epoch_51 Task124_DecathProst Case42 mask_1 IoU 0.6636767983436584
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+ epoch_51 Task124_DecathProst Case42 mask_1 Dice 0.7978434562683105
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerRW__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.json ADDED
@@ -0,0 +1,132 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "epoch_51": {
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+ "Task121_UCL": {
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+ "Case01": {
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+ "mask_1": {
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+ "IoU": 0.5396286249160767,
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+ "Dice": 0.7009854316711426
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+ "Case32": {
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+ "mask_1": {
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+ "IoU": 0.5742313861846924,
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+ "Dice": 0.7295387387275696
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+ "Case34": {
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+ "mask_1": {
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+ "IoU": 0.5912203788757324,
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+ "Task122_I2CVB": {
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+ "Case08": {
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+ "Case13": {
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+ "Task123_ISBI": {
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+ "Case03": {
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+ "Case12": {
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+ "Case15": {
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+ "IoU": 0.7216877937316895,
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+ "Case18": {
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+ "mask_1": {
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+ "Dice": 0.8418872356414795
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+ }
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+ "IoU": 0.7096120119094849,
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+ "Dice": 0.830143928527832
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+ "mask_1": {
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+ "IoU": 0.6636767983436584,
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+ "Dice": 0.7978434562683105
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+ }
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+ }
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+ }
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+ }
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+ }
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/model_summary.csv ADDED
@@ -0,0 +1,10 @@
 
 
 
 
 
 
 
 
 
 
 
1
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baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv ADDED
@@ -0,0 +1,104 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ trainer network overall train order trained on trained on fold used head for eval eval on task metric seg mask mean +/- std mean +/- std [in %] checkpoint 0
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102
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103
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baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt ADDED
@@ -0,0 +1,28 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluation performed after Epoch 48, trained on fold 0.
2
+
3
+ The nnUNetTrainerSequential model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst has been used for this evaluation with the Task122_I2CVB head. The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+
5
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and IoU as metric:
6
+ mean (+/- std): 0.5160952111085256 +/- 0.022080230894735927
7
+
8
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and Dice as metric:
9
+ mean (+/- std): 0.6805390119552612 +/- 0.019405889573392614
10
+
11
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and IoU as metric:
12
+ mean (+/- std): 0.7978666126728058 +/- 0.014453854750540503
13
+
14
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and Dice as metric:
15
+ mean (+/- std): 0.887498289346695 +/- 0.008971546149061673
16
+
17
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and IoU as metric:
18
+ mean (+/- std): 0.7147418558597565 +/- 0.0062180651760129525
19
+
20
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and Dice as metric:
21
+ mean (+/- std): 0.8336283365885416 +/- 0.004227702355140445
22
+
23
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and IoU as metric:
24
+ mean (+/- std): 0.6943273884909493 +/- 0.014489527589716859
25
+
26
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and Dice as metric:
27
+ mean (+/- std): 0.8195042525018964 +/- 0.010094991661853028
28
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/training_log_2024_10_23_20_14_28.txt ADDED
@@ -0,0 +1,32 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Starting...
2
+ 2024-10-23 20:14:28.521609: The nnUNetTrainerSequential model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst will be used for this evaluation with the Task122_I2CVB head.
3
+ 2024-10-23 20:14:28.521819: The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+ 2024-10-23 20:14:28.521868: Start performing evaluation on fold 0 for the following tasks: Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst.
5
+
6
+ 2024-10-23 20:14:28.525208: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task121_UCL/splits_final.pkl
7
+ 2024-10-23 20:14:28.525316: The split file contains 5 splits.
8
+ 2024-10-23 20:14:28.525363: Desired fold for training: 0
9
+ 2024-10-23 20:14:28.525436: This split has 10 training and 3 validation cases.
10
+ 2024-10-23 20:14:30.332910: Performing validation with validation data from task Task121_UCL.
11
+ 2024-10-23 20:14:53.838543: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task122_I2CVB/splits_final.pkl
12
+ 2024-10-23 20:14:53.838860: The split file contains 5 splits.
13
+ 2024-10-23 20:14:53.838918: Desired fold for training: 0
14
+ 2024-10-23 20:14:53.838975: This split has 15 training and 4 validation cases.
15
+ 2024-10-23 20:14:57.471290: Performing validation with validation data from task Task122_I2CVB.
16
+ 2024-10-23 20:15:10.339052: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task123_ISBI/splits_final.pkl
17
+ 2024-10-23 20:15:10.339298: The split file contains 5 splits.
18
+ 2024-10-23 20:15:10.339367: Desired fold for training: 0
19
+ 2024-10-23 20:15:10.339417: This split has 24 training and 6 validation cases.
20
+ 2024-10-23 20:15:13.686997: Performing validation with validation data from task Task123_ISBI.
21
+ 2024-10-23 20:15:24.349030: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task124_DecathProst/splits_final.pkl
22
+ 2024-10-23 20:15:24.349261: The split file contains 5 splits.
23
+ 2024-10-23 20:15:24.349319: Desired fold for training: 0
24
+ 2024-10-23 20:15:24.349364: This split has 25 training and 7 validation cases.
25
+ 2024-10-23 20:15:28.011621: Performing validation with validation data from task Task124_DecathProst.
26
+ 2024-10-23 20:15:38.895613: Finished with the evaluation on fold 0. The results can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics.csv or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json.
27
+
28
+ 2024-10-23 20:15:38.895910: Summarizing the results (calculate mean and std)..
29
+ 2024-10-23 20:15:38.932928: The summarized results of the evaluation on fold 0 can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv.
30
+
31
+
32
+ 2024-10-23 20:15:38.933015: The Evaluation took 70.41 seconds.
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.csv ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Epoch Task subject_id seg_mask metric value
2
+ epoch_48 Task121_UCL Case01 mask_1 IoU 0.4850572645664215
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+ epoch_48 Task121_UCL Case01 mask_1 Dice 0.6532505750656128
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+ epoch_48 Task121_UCL Case32 mask_1 IoU 0.5286495089530945
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+ epoch_48 Task121_UCL Case32 mask_1 Dice 0.6916556358337402
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+ epoch_48 Task121_UCL Case34 mask_1 IoU 0.5345788598060608
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+ epoch_48 Task121_UCL Case34 mask_1 Dice 0.6967108249664307
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+ epoch_48 Task122_I2CVB Case03 mask_1 IoU 0.8004371523857117
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+ epoch_48 Task122_I2CVB Case03 mask_1 Dice 0.8891586661338806
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+ epoch_48 Task122_I2CVB Case08 mask_1 IoU 0.7757734060287476
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+ epoch_48 Task122_I2CVB Case08 mask_1 Dice 0.8737301826477051
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+ epoch_48 Task122_I2CVB Case13 mask_1 IoU 0.7989569902420044
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+ epoch_48 Task122_I2CVB Case13 mask_1 Dice 0.8882446885108948
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+ epoch_48 Task122_I2CVB Case15 mask_1 IoU 0.8162989020347595
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+ epoch_48 Task122_I2CVB Case15 mask_1 Dice 0.8988596200942993
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+ epoch_48 Task123_ISBI Case03 mask_1 IoU 0.71042400598526
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+ epoch_48 Task123_ISBI Case03 mask_1 Dice 0.8306992650032043
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+ epoch_48 Task123_ISBI Case08 mask_1 IoU 0.7203028798103333
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+ epoch_48 Task123_ISBI Case08 mask_1 Dice 0.837414026260376
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+ epoch_48 Task123_ISBI Case12 mask_1 IoU 0.7056788206100464
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+ epoch_48 Task123_ISBI Case12 mask_1 Dice 0.8274462819099426
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+ epoch_48 Task123_ISBI Case15 mask_1 IoU 0.7118170857429504
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+ epoch_48 Task123_ISBI Case15 mask_1 Dice 0.8316508531570435
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+ epoch_48 Task123_ISBI Case18 mask_1 IoU 0.7159910202026367
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+ epoch_48 Task123_ISBI Case18 mask_1 Dice 0.8344927430152893
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+ epoch_48 Task123_ISBI Case26 mask_1 IoU 0.724237322807312
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+ epoch_48 Task123_ISBI Case26 mask_1 Dice 0.8400668501853943
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+ epoch_48 Task124_DecathProst Case00 mask_1 IoU 0.701035737991333
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+ epoch_48 Task124_DecathProst Case00 mask_1 Dice 0.8242457509040833
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+ epoch_48 Task124_DecathProst Case04 mask_1 IoU 0.677291750907898
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+ epoch_48 Task124_DecathProst Case04 mask_1 Dice 0.8076015710830688
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+ epoch_48 Task124_DecathProst Case14 mask_1 IoU 0.6984915137290955
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+ epoch_48 Task124_DecathProst Case14 mask_1 Dice 0.82248455286026
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+ epoch_48 Task124_DecathProst Case20 mask_1 IoU 0.697597086429596
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+ epoch_48 Task124_DecathProst Case20 mask_1 Dice 0.821864128112793
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+ epoch_48 Task124_DecathProst Case25 mask_1 IoU 0.6942139267921448
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+ epoch_48 Task124_DecathProst Case25 mask_1 Dice 0.8195115327835083
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+ epoch_48 Task124_DecathProst Case31 mask_1 IoU 0.7193025946617126
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+ epoch_48 Task124_DecathProst Case31 mask_1 Dice 0.8367376327514648
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+ epoch_48 Task124_DecathProst Case42 mask_1 IoU 0.6723591089248657
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+ epoch_48 Task124_DecathProst Case42 mask_1 Dice 0.8040845990180969
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json ADDED
@@ -0,0 +1,132 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
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+ "epoch_48": {
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+ "Task121_UCL": {
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+ "Case01": {
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+ "mask_1": {
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+ "IoU": 0.4850572645664215,
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+ "Dice": 0.6532505750656128
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+ "Case32": {
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+ "mask_1": {
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+ "IoU": 0.5286495089530945,
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+ "Dice": 0.6916556358337402
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+ "Case34": {
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+ "mask_1": {
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+ "IoU": 0.5345788598060608,
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+ }
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+ "Task124_DecathProst": {
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+ }
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+ "mask_1": {
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+ "IoU": 0.7193025946617126,
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124
+ "Case42": {
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+ "mask_1": {
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+ "IoU": 0.6723591089248657,
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+ "Dice": 0.8040845990180969
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+ }
129
+ }
130
+ }
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+ }
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+ }
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/model_summary.csv ADDED
@@ -0,0 +1,10 @@
 
 
 
 
 
 
 
 
 
 
 
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baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.csv ADDED
@@ -0,0 +1,104 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ trainer network overall train order trained on trained on fold used head for eval eval on task metric seg mask mean +/- std mean +/- std [in %] checkpoint 0
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102
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103
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104
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.txt ADDED
@@ -0,0 +1,28 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluation performed after Epoch 48, trained on fold 0.
2
+
3
+ The nnUNetTrainerSequential model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst has been used for this evaluation with the Task122_I2CVB head. The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+
5
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and IoU as metric:
6
+ mean (+/- std): 0.5157383779684702 +/- 0.022051716080551308
7
+
8
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and Dice as metric:
9
+ mean (+/- std): 0.6802289684613546 +/- 0.019389710279641603
10
+
11
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and IoU as metric:
12
+ mean (+/- std): 0.7978666126728058 +/- 0.014453854750540503
13
+
14
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and Dice as metric:
15
+ mean (+/- std): 0.887498289346695 +/- 0.008971546149061673
16
+
17
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and IoU as metric:
18
+ mean (+/- std): 0.7147418558597565 +/- 0.0062180651760129525
19
+
20
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and Dice as metric:
21
+ mean (+/- std): 0.8336283365885416 +/- 0.004227702355140445
22
+
23
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and IoU as metric:
24
+ mean (+/- std): 0.6943273884909493 +/- 0.014489527589716859
25
+
26
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and Dice as metric:
27
+ mean (+/- std): 0.8195042525018964 +/- 0.010094991661853028
28
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/training_log_2025_3_6_07_45_57.txt ADDED
@@ -0,0 +1,32 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Starting...
2
+ 2025-03-06 07:45:57.455874: The nnUNetTrainerSequential model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst will be used for this evaluation with the Task122_I2CVB head.
3
+ 2025-03-06 07:45:57.456106: The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+ 2025-03-06 07:45:57.456149: Start performing evaluation on fold 0 for the following tasks: Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst.
5
+
6
+ 2025-03-06 07:45:57.459600: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task121_UCL/splits_final.pkl
7
+ 2025-03-06 07:45:57.459713: The split file contains 5 splits.
8
+ 2025-03-06 07:45:57.459764: Desired fold for training: 0
9
+ 2025-03-06 07:45:57.459808: This split has 10 training and 3 validation cases.
10
+ 2025-03-06 07:45:59.356844: Performing validation with validation data from task Task121_UCL.
11
+ 2025-03-06 07:46:10.900042: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task122_I2CVB/splits_final.pkl
12
+ 2025-03-06 07:46:10.900252: The split file contains 5 splits.
13
+ 2025-03-06 07:46:10.900313: Desired fold for training: 0
14
+ 2025-03-06 07:46:10.900357: This split has 15 training and 4 validation cases.
15
+ 2025-03-06 07:46:15.434080: Performing validation with validation data from task Task122_I2CVB.
16
+ 2025-03-06 07:46:21.418514: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task123_ISBI/splits_final.pkl
17
+ 2025-03-06 07:46:21.418918: The split file contains 5 splits.
18
+ 2025-03-06 07:46:21.418977: Desired fold for training: 0
19
+ 2025-03-06 07:46:21.419022: This split has 24 training and 6 validation cases.
20
+ 2025-03-06 07:46:25.312099: Performing validation with validation data from task Task123_ISBI.
21
+ 2025-03-06 07:46:31.549958: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task124_DecathProst/splits_final.pkl
22
+ 2025-03-06 07:46:31.550212: The split file contains 5 splits.
23
+ 2025-03-06 07:46:31.550269: Desired fold for training: 0
24
+ 2025-03-06 07:46:31.550312: This split has 25 training and 7 validation cases.
25
+ 2025-03-06 07:46:35.438564: Performing validation with validation data from task Task124_DecathProst.
26
+ 2025-03-06 07:46:41.546088: Finished with the evaluation on fold 0. The results can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics.csv or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.json.
27
+
28
+ 2025-03-06 07:46:41.546459: Summarizing the results (calculate mean and std)..
29
+ 2025-03-06 07:46:41.581114: The summarized results of the evaluation on fold 0 can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.txt or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/summarized_val_metrics.csv.
30
+
31
+
32
+ 2025-03-06 07:46:41.581191: The Evaluation took 44.13 seconds.
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB/nnUNetTrainerSequential__nnUNetPlansv2.1/Generic_UNet/SEQ/last_head/fold_0/val_metrics_eval.csv ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Epoch Task subject_id seg_mask metric value
2
+ epoch_48 Task121_UCL Case01 mask_1 IoU 0.4847410023212433
3
+ epoch_48 Task121_UCL Case01 mask_1 Dice 0.6529636979103088
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+ epoch_48 Task121_UCL Case32 mask_1 IoU 0.5282723903656006
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+ epoch_48 Task121_UCL Case32 mask_1 Dice 0.6913327574729919
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+ epoch_48 Task121_UCL Case34 mask_1 IoU 0.5342017412185669
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+ epoch_48 Task121_UCL Case34 mask_1 Dice 0.6963904500007629
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+ epoch_48 Task122_I2CVB Case03 mask_1 IoU 0.8004371523857117
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+ epoch_48 Task122_I2CVB Case03 mask_1 Dice 0.8891586661338806
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+ epoch_48 Task122_I2CVB Case08 mask_1 IoU 0.7757734060287476
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+ epoch_48 Task122_I2CVB Case08 mask_1 Dice 0.8737301826477051
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+ epoch_48 Task122_I2CVB Case13 mask_1 IoU 0.7989569902420044
13
+ epoch_48 Task122_I2CVB Case13 mask_1 Dice 0.8882446885108948
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+ epoch_48 Task122_I2CVB Case15 mask_1 IoU 0.8162989020347595
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+ epoch_48 Task122_I2CVB Case15 mask_1 Dice 0.8988596200942993
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+ epoch_48 Task123_ISBI Case03 mask_1 IoU 0.71042400598526
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+ epoch_48 Task123_ISBI Case03 mask_1 Dice 0.8306992650032043
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+ epoch_48 Task123_ISBI Case08 mask_1 IoU 0.7203028798103333
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+ epoch_48 Task123_ISBI Case08 mask_1 Dice 0.837414026260376
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+ epoch_48 Task123_ISBI Case12 mask_1 IoU 0.7056788206100464
21
+ epoch_48 Task123_ISBI Case12 mask_1 Dice 0.8274462819099426
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+ epoch_48 Task123_ISBI Case15 mask_1 IoU 0.7118170857429504
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+ epoch_48 Task123_ISBI Case15 mask_1 Dice 0.8316508531570435
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+ epoch_48 Task123_ISBI Case18 mask_1 IoU 0.7159910202026367
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+ epoch_48 Task123_ISBI Case18 mask_1 Dice 0.8344927430152893
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+ epoch_48 Task123_ISBI Case26 mask_1 IoU 0.724237322807312
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+ epoch_48 Task123_ISBI Case26 mask_1 Dice 0.8400668501853943
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+ epoch_48 Task124_DecathProst Case00 mask_1 IoU 0.701035737991333
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+ epoch_48 Task124_DecathProst Case00 mask_1 Dice 0.8242457509040833
30
+ epoch_48 Task124_DecathProst Case04 mask_1 IoU 0.677291750907898
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+ epoch_48 Task124_DecathProst Case04 mask_1 Dice 0.8076015710830688
32
+ epoch_48 Task124_DecathProst Case14 mask_1 IoU 0.6984915137290955
33
+ epoch_48 Task124_DecathProst Case14 mask_1 Dice 0.82248455286026
34
+ epoch_48 Task124_DecathProst Case20 mask_1 IoU 0.697597086429596
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+ epoch_48 Task124_DecathProst Case20 mask_1 Dice 0.821864128112793
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+ }
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+ }
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/model_summary.csv ADDED
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baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv ADDED
@@ -0,0 +1,104 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ trainer network overall train order trained on trained on fold used head for eval eval on task metric seg mask mean +/- std mean +/- std [in %] checkpoint 0
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+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt ADDED
@@ -0,0 +1,28 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Evaluation performed after Epoch 250, trained on fold 0.
2
+
3
+ The nnUNetTrainerEWC model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst has been used for this evaluation with the Task123_ISBI head. The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+
5
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and IoU as metric:
6
+ mean (+/- std): 0.7253949046134949 +/- 0.009966595044313607
7
+
8
+ Evaluation performed for fold 0, task Task121_UCL using segmentation mask 1 and Dice as metric:
9
+ mean (+/- std): 0.8408063054084778 +/- 0.006710505585871415
10
+
11
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and IoU as metric:
12
+ mean (+/- std): 0.6889782398939133 +/- 0.014566028308552812
13
+
14
+ Evaluation performed for fold 0, task Task122_I2CVB using segmentation mask 1 and Dice as metric:
15
+ mean (+/- std): 0.8157638311386108 +/- 0.010237818190260378
16
+
17
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and IoU as metric:
18
+ mean (+/- std): 0.7831400036811829 +/- 0.0048185152163620435
19
+
20
+ Evaluation performed for fold 0, task Task123_ISBI using segmentation mask 1 and Dice as metric:
21
+ mean (+/- std): 0.8783748845259348 +/- 0.003027549389143765
22
+
23
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and IoU as metric:
24
+ mean (+/- std): 0.7784789289746966 +/- 0.00624781550091986
25
+
26
+ Evaluation performed for fold 0, task Task124_DecathProst using segmentation mask 1 and Dice as metric:
27
+ mean (+/- std): 0.8754296473094395 +/- 0.003946893157929156
28
+
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/training_log_2024_10_24_00_12_00.txt ADDED
@@ -0,0 +1,32 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Starting...
2
+ 2024-10-24 00:12:00.179860: The nnUNetTrainerEWC model trained on Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst will be used for this evaluation with the Task123_ISBI head.
3
+ 2024-10-24 00:12:00.180093: The used checkpoint can be found at /home/lhbac/viccle/required_folder/RESULTS_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/fold_0/model_final_checkpoint.model.
4
+ 2024-10-24 00:12:00.180128: Start performing evaluation on fold 0 for the following tasks: Task121_UCL, Task122_I2CVB, Task123_ISBI, Task124_DecathProst.
5
+
6
+ 2024-10-24 00:12:00.182848: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task121_UCL/splits_final.pkl
7
+ 2024-10-24 00:12:00.182932: The split file contains 5 splits.
8
+ 2024-10-24 00:12:00.182968: Desired fold for training: 0
9
+ 2024-10-24 00:12:00.182997: This split has 10 training and 3 validation cases.
10
+ 2024-10-24 00:12:01.339025: Performing validation with validation data from task Task121_UCL.
11
+ 2024-10-24 00:12:10.788818: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task122_I2CVB/splits_final.pkl
12
+ 2024-10-24 00:12:10.789061: The split file contains 5 splits.
13
+ 2024-10-24 00:12:10.789128: Desired fold for training: 0
14
+ 2024-10-24 00:12:10.789171: This split has 15 training and 4 validation cases.
15
+ 2024-10-24 00:12:13.199727: Performing validation with validation data from task Task122_I2CVB.
16
+ 2024-10-24 00:12:18.564729: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task123_ISBI/splits_final.pkl
17
+ 2024-10-24 00:12:18.564902: The split file contains 5 splits.
18
+ 2024-10-24 00:12:18.564943: Desired fold for training: 0
19
+ 2024-10-24 00:12:18.564973: This split has 24 training and 6 validation cases.
20
+ 2024-10-24 00:12:21.134351: Performing validation with validation data from task Task123_ISBI.
21
+ 2024-10-24 00:12:26.472227: Using splits from existing split file: /home/lhbac/viccle/required_folder/nnUNet_preprocessed/Task124_DecathProst/splits_final.pkl
22
+ 2024-10-24 00:12:26.472436: The split file contains 5 splits.
23
+ 2024-10-24 00:12:26.472483: Desired fold for training: 0
24
+ 2024-10-24 00:12:26.472515: This split has 25 training and 7 validation cases.
25
+ 2024-10-24 00:12:29.048715: Performing validation with validation data from task Task124_DecathProst.
26
+ 2024-10-24 00:12:34.618745: Finished with the evaluation on fold 0. The results can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics.csv or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.json.
27
+
28
+ 2024-10-24 00:12:34.618878: Summarizing the results (calculate mean and std)..
29
+ 2024-10-24 00:12:34.641410: The summarized results of the evaluation on fold 0 can be found at: /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.txt or /home/lhbac/viccle/required_folder/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/summarized_val_metrics.csv.
30
+
31
+
32
+ 2024-10-24 00:12:34.641473: The Evaluation took 34.46 seconds.
baseline2/EVALUATION_FOLDER_PRETRAINED_LIFELONG/nnUNet_ext/2d/Task121_UCL_Task122_I2CVB_Task123_ISBI_Task124_DecathProst/Task121_UCL_Task122_I2CVB_Task123_ISBI/nnUNetTrainerEWC__nnUNetPlansv2.1/Generic_UNet/SEQ/corresponding_head/fold_0/val_metrics_eval.csv ADDED
@@ -0,0 +1,41 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ Epoch Task subject_id seg_mask metric value
2
+ epoch_250 Task121_UCL Case01 mask_1 IoU 0.7121040225028992
3
+ epoch_250 Task121_UCL Case01 mask_1 Dice 0.8318466544151306
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+ epoch_250 Task121_UCL Case32 mask_1 IoU 0.7361040711402893
5
+ epoch_250 Task121_UCL Case32 mask_1 Dice 0.8479953408241272
6
+ epoch_250 Task121_UCL Case34 mask_1 IoU 0.7279766201972961
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