4) Click on Finish Search to run the query. This will find all that co-occur with “Chemicals” Thus, these will be associated with through the “Neoplasms”. “Chemicals” “Kinase” intermediary term. “Neoplasm” In total, there 11 143 chemicals associated with ranked by article count. This “Neoplasms” means that 11 143 unique connections (A-B-C). “Kinase”-“Neoplasms”-“Chemicals” 5) Expand the table size in the Table Limit” box and find “Set “imatinib” There are 255 articles in which and co-occur, thereby completing a “imatinib” “Neoplasms” connection. This is a well-established A-B-C connection that “Kinase”-“Neoplasms”-“imatinib” Chemotext is capable of retrieving. B) Linking to Articles and Downloading Results 1) As with all previous sections, the CSV file with final terms and article counts can be accessed through the CSV” tab. Additionally, CSV file with final terms, article counts, and “View associated PMIDs can be accessed through the with pmids” tab. “CSV 2) With Chemotext, the article in which both terms co-occur can be directly accessed. Click on the article count for “255” “imatinib”. Chemotext will provide the PMIDs or actual article title (when available) for all 255 associated articles.
4) Click on Finish Search to run the query. This will find all “Chemicals” that co-occur with “Neoplasms”. Thus, these “Chemicals” will be associated with “Kinase” through the intermediary “Neoplasm” term. In total, there 11 143 chemicals associated with “Neoplasms” ranked by article count. This means that 11 143 unique “Kinase”-“Neoplasms”-“Chemicals” connections (A-B-C). 5) Expand the table size in the “Set Table Limit” box and find “imatinib” There are 255 articles in which “imatinib” and “Neoplasms” co-occur, thereby completing a “Kinase”-“Neoplasms”-“imatinib” connection. This is a well-established A-B-C connection that Chemotext is capable of retrieving. B) Linking to Articles and Downloading Results 1) As with all previous sections, the CSV file with final terms and article counts can be accessed through the “View CSV” tab. Additionally, CSV file with final terms, article counts, and associated PMIDs can be accessed through the “CSV with pmids” tab. 2) With Chemotext, the article in which both terms co-occur can be directly accessed. Click on the “255” article count for “imatinib”. Chemotext will provide the PMIDs or actual article title (when available) for all 255 associated articles.
ChemotextAppNote_Tutorial_v3.docx