Supplementary Table 1: Summary of data sets used in this study. The gene expression gene lists and the proteomics gene lists are from this study. The additional lists are known protein-protein interaction for GR from the literature (LC-PPIs), lists of target genes from ChIP-seq studies, and gene lists associated with mitochondria as listed in the GO cellular component ontology. Each list entry has a URL for Enrichr where the baseline URL is / From these links the enrichment results and the gene sets can be accessed. Gene/protein list Source Size Enrichr Link Alpha Dex Proteomics 37 Alpha Vehicle Proteomics 304 GR_alpha_dex-dn Microarrays 412 GR_alpha_dex-up Microarrays 185 GR_alpha_veh-dn Microarrays 301 GR_alpha_veh-up Microarrays 296 GR_gamma_dex-dn Microarrays 316 GR_gamma_dex-up Microarrays 282 GR_gamma_veh-dn Microarrays 292 GR_gamma_veh-up Microarrays 307 Gamma Dex Proteomics 54 Gamma Vehicle Proteomics 473 LC-PPIs Literature 140 ChEA 1132 ChEA 918 NR3C1_A549_hg19 ENCODE 1855 NR3C1_ECC-1_hg19 ENCODE 237 NR3C1_HepG2_hg19 ENCODE 211 mitochondrial matrix GO 208 mitochondrial GO 457 membrane mitochondrial GO 14 respiratory chain mitochondrion GO 1269
Supplementary Table 1: Summary of data sets used in this study. The gene expression gene lists and the proteomics gene lists are from this study. The additional lists are known protein-protein interaction for GR from the literature (LC-PPIs), lists of target genes from ChIP-seq studies, and gene lists associated with mitochondria as listed in the GO cellular component ontology. Each list entry has a URL for Enrichr where the baseline URL is / From these links the enrichment results and the gene sets can be accessed. Gene/protein list Source Size Enrichr Link Alpha Dex Proteomics 37 Alpha Vehicle Proteomics 304 GR_alpha_dex-dn Microarrays 412 GR_alpha_dex-up Microarrays 185 GR_alpha_veh-dn Microarrays 301 GR_alpha_veh-up Microarrays 296 GR_gamma_dex-dn Microarrays 316 GR_gamma_dex-up Microarrays 282 GR_gamma_veh-dn Microarrays 292 GR_gamma_veh-up Microarrays 307 Gamma Dex Proteomics 54 Gamma Vehicle Proteomics 473 LC-PPIs Literature 140 ChEA 1132 ChEA 918 NR3C1_A549_hg19 ENCODE 1855 NR3C1_ECC-1_hg19 ENCODE 237 NR3C1_HepG2_hg19 ENCODE 211 mitochondrial matrix GO 208 mitochondrial membrane GO 457 mitochondrial respiratory chain GO 14 mitochondrion GO 1269