Table S10 Genes within the chromosome 3 yeast/hyphae (15°C) dimorphism QTL confidence interval containing ≤ 30 candidate genes for cross 3D1 x 3D7, excluding genes with no sequence variation or with only synonymous SNPs. Number of Number of other Highest Gene ontology Gene ontology Gene ontology RPKM Protein ID a Gene ontology name Non-Syn sequence Additional information RPKM biological process cellular component molecular function Stdv SNPs b variations b c mean d 108612 1 codon insertion 55.6 NotAvailable NotAvailable NotAvailable metal ion binding; 5 (M) / 6.4 (XP_003854427) (M), 3 intron (m) (7dpi) oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 38733 oxidation-reduction 2-oxoglutarate as NotAvailable NotAvailable 9 (M) 0 / 5.4 (7dpi) 3.4 (XP_003854426) process one donor, and incorporation of one atom each of oxygen into both donors; organic cyclic compound binding translational frameshifting; peptidyl-lysine modification to translation hypusine; positive initiation factor regulation of 812.1 activity; 1 upstream (m), 2 103731 translation initiation translational (13dpi) ribosome; translation 1 (M) intron (m), 1 UTR5 / 41.3 (XP_003854425) factor activity termination; positive elongation factor Prime (m) regulation of activity; ribosome translational binding elongation; regulation of translational initiation transmembrane substrate-specific 56726 sugar:hydrogen transport; integral to transmembrane 13 2 (M) 1 intron (m) / 0.8 (XP_003854424) symporter activity carbohydrate membrane transporter (56dpi) transport activity metal ion binding; Peptidase M3A and 38371 # 1 downstream (m), 68.6 proteolysis; NotAvailable 4 (M) M3B, 24.9 (XP_003854421) activity 1 intron (m) (13dpi) activity thimet/oligopeptidase F
Table S10 Genes within the chromosome 3 yeast/hyphae (15°C) dimorphism QTL confidence interval containing ≤ 30 candidate genes for cross 3D1 x 3D7, excluding genes with no sequence variation or with only synonymous SNPs. Protein ID a Gene ontology name Gene ontology biological process Gene ontology cellular component Gene ontology molecular function Number of Non-Syn SNPs b Number of other sequence variations b c Additional information Highest RPKM mean d RPKM Stdv 108612 (XP_003854427) NotAvailable NotAvailable NotAvailable metal ion binding; 5 (M) 1 codon insertion (M), 3 intron (m) / 55.6 (7dpi) 6.4 38733 (XP_003854426) NotAvailable oxidation-reduction process NotAvailable oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; organic cyclic compound binding 9 (M) 0 / 5.4 (7dpi) 3.4 103731 (XP_003854425) translation initiation factor activity translational frameshifting; peptidyl-lysine modification to hypusine; positive regulation of translational termination; positive regulation of translational elongation; regulation of translational initiation ribosome; translation initiation factor activity; translation elongation factor activity; ribosome binding 1 (M) 1 upstream (m), 2 intron (m), 1 UTR5 Prime (m) / 812.1 (13dpi) 41.3 56726 (XP_003854424) sugar:hydrogen symporter activity transmembrane transport; carbohydrate transport integral to membrane substrate-specific transmembrane transporter activity 2 (M) 1 intron (m) / 13 (56dpi) 0.8 38371 # (XP_003854421) activity proteolysis; NotAvailable metal ion binding; activity 4 (M) 1 downstream (m), 1 intron (m) Peptidase M3A and M3B, thimet/oligopeptidase F 68.6 (13dpi) 24.9