--- license: apache-2.0 tags: - biology - dna - reasoning ---

🧬 BioReason
Incentivizing Multimodal Biological Reasoning within a DNA-LLM Model

arXiv GitHub Website HuggingFace Dataset


# Variant Effect Coding Non-SNVs Dataset 36,088 core non-SNV entries from ClinVar 2024-02-28 release, filtered for coding variants with ≥2-star review status, using stratified train/test splits for balanced disease representation in pathogenic/benign classification. ## Usage ```python from datasets import load_dataset dataset = load_dataset("wanglab/variant_effect_non_snv") example = dataset["train"][0] print(example) ``` ## Citation ``` @misc{fallahpour2025bioreasonincentivizingmultimodalbiological, title={BioReason: Incentivizing Multimodal Biological Reasoning within a DNA-LLM Model}, author={Adibvafa Fallahpour and Andrew Magnuson and Purav Gupta and Shihao Ma and Jack Naimer and Arnav Shah and Haonan Duan and Omar Ibrahim and Hani Goodarzi and Chris J. Maddison and Bo Wang}, year={2025}, eprint={2505.23579}, archivePrefix={arXiv}, primaryClass={cs.LG}, url={https://arxiv.org/abs/2505.23579}, } ```