import _surface
import chimera
try:
  import chimera.runCommand
except:
  pass
from VolumePath import markerset as ms
try:
  from VolumePath import Marker_Set, Link
  new_marker_set=Marker_Set
except:
  from VolumePath import volume_path_dialog
  d= volume_path_dialog(True)
  new_marker_set= d.new_marker_set
marker_sets={}
surf_sets={}
if "particle_0 geometry" not in marker_sets:
  s=new_marker_set('particle_0 geometry')
  marker_sets["particle_0 geometry"]=s
s= marker_sets["particle_0 geometry"]
mark=s.place_marker((3017.86, 2922.98, 7280.76), (0, 1, 0), 846)
if "particle_1 geometry" not in marker_sets:
  s=new_marker_set('particle_1 geometry')
  marker_sets["particle_1 geometry"]=s
s= marker_sets["particle_1 geometry"]
mark=s.place_marker((1821.54, 954.493, 6038.05), (0.7, 0.7, 0.7), 846)
if "particle_2 geometry" not in marker_sets:
  s=new_marker_set('particle_2 geometry')
  marker_sets["particle_2 geometry"]=s
s= marker_sets["particle_2 geometry"]
mark=s.place_marker((1814.54, 1849.34, 7675.64), (0.7, 0.7, 0.7), 846)
if "particle_3 geometry" not in marker_sets:
  s=new_marker_set('particle_3 geometry')
  marker_sets["particle_3 geometry"]=s
s= marker_sets["particle_3 geometry"]
mark=s.place_marker((2683.16, 2068.86, 7460.03), (0.7, 0.7, 0.7), 846)
if "particle_4 geometry" not in marker_sets:
  s=new_marker_set('particle_4 geometry')
  marker_sets["particle_4 geometry"]=s
s= marker_sets["particle_4 geometry"]
mark=s.place_marker((2933.12, 2743.98, 6803.9), (0.7, 0.7, 0.7), 846)
if "particle_5 geometry" not in marker_sets:
  s=new_marker_set('particle_5 geometry')
  marker_sets["particle_5 geometry"]=s
s= marker_sets["particle_5 geometry"]
mark=s.place_marker((3678.1, 2610.53, 8041.94), (0.7, 0.7, 0.7), 846)
if "particle_6 geometry" not in marker_sets:
  s=new_marker_set('particle_6 geometry')
  marker_sets["particle_6 geometry"]=s
s= marker_sets["particle_6 geometry"]
mark=s.place_marker((4504.38, 631.35, 8730.64), (0.7, 0.7, 0.7), 846)
if "particle_7 geometry" not in marker_sets:
  s=new_marker_set('particle_7 geometry')
  marker_sets["particle_7 geometry"]=s
s= marker_sets["particle_7 geometry"]
mark=s.place_marker((3755.51, 2858.42, 8990.37), (0.7, 0.7, 0.7), 846)
if "particle_8 geometry" not in marker_sets:
  s=new_marker_set('particle_8 geometry')
  marker_sets["particle_8 geometry"]=s
s= marker_sets["particle_8 geometry"]
mark=s.place_marker((3958.74, 3102.55, 8771.92), (0.7, 0.7, 0.7), 846)
if "particle_9 geometry" not in marker_sets:
  s=new_marker_set('particle_9 geometry')
  marker_sets["particle_9 geometry"]=s
s= marker_sets["particle_9 geometry"]
mark=s.place_marker((5300.65, 3436.24, 9283.58), (0.7, 0.7, 0.7), 846)
if "particle_10 geometry" not in marker_sets:
  s=new_marker_set('particle_10 geometry')
  marker_sets["particle_10 geometry"]=s
s= marker_sets["particle_10 geometry"]
mark=s.place_marker((3588.43, 3975.27, 10240.7), (0, 1, 0), 846)
if "particle_11 geometry" not in marker_sets:
  s=new_marker_set('particle_11 geometry')
  marker_sets["particle_11 geometry"]=s
s= marker_sets["particle_11 geometry"]
mark=s.place_marker((2570.17, 4662.61, 8503.78), (0.7, 0.7, 0.7), 846)
if "particle_12 geometry" not in marker_sets:
  s=new_marker_set('particle_12 geometry')
  marker_sets["particle_12 geometry"]=s
s= marker_sets["particle_12 geometry"]
mark=s.place_marker((3260.88, 3934.27, 10195.7), (0.7, 0.7, 0.7), 846)
if "particle_13 geometry" not in marker_sets:
  s=new_marker_set('particle_13 geometry')
  marker_sets["particle_13 geometry"]=s
s= marker_sets["particle_13 geometry"]
mark=s.place_marker((4564.73, 4013.24, 8905.56), (0.7, 0.7, 0.7), 846)
if "particle_14 geometry" not in marker_sets:
  s=new_marker_set('particle_14 geometry')
  marker_sets["particle_14 geometry"]=s
s= marker_sets["particle_14 geometry"]
mark=s.place_marker((3378.7, 4358.57, 9303.59), (0.7, 0.7, 0.7), 846)
if "particle_15 geometry" not in marker_sets:
  s=new_marker_set('particle_15 geometry')
  marker_sets["particle_15 geometry"]=s
s= marker_sets["particle_15 geometry"]
mark=s.place_marker((1855.41, 5699.08, 9182.93), (0.7, 0.7, 0.7), 846)
if "particle_16 geometry" not in marker_sets:
  s=new_marker_set('particle_16 geometry')
  marker_sets["particle_16 geometry"]=s
s= marker_sets["particle_16 geometry"]
mark=s.place_marker((3710.68, 5791.38, 10105.6), (0.7, 0.7, 0.7), 846)
if "particle_17 geometry" not in marker_sets:
  s=new_marker_set('particle_17 geometry')
  marker_sets["particle_17 geometry"]=s
s= marker_sets["particle_17 geometry"]
mark=s.place_marker((3981.35, 5566.64, 9705.19), (0.7, 0.7, 0.7), 846)
if "particle_18 geometry" not in marker_sets:
  s=new_marker_set('particle_18 geometry')
  marker_sets["particle_18 geometry"]=s
s= marker_sets["particle_18 geometry"]
mark=s.place_marker((3289.72, 5247.33, 8155.8), (0.7, 0.7, 0.7), 846)
if "particle_19 geometry" not in marker_sets:
  s=new_marker_set('particle_19 geometry')
  marker_sets["particle_19 geometry"]=s
s= marker_sets["particle_19 geometry"]
mark=s.place_marker((2150.78, 5009.22, 8050.09), (0.7, 0.7, 0.7), 846)
if "particle_20 geometry" not in marker_sets:
  s=new_marker_set('particle_20 geometry')
  marker_sets["particle_20 geometry"]=s
s= marker_sets["particle_20 geometry"]
mark=s.place_marker((3629.22, 5495.53, 8583.55), (0, 1, 0), 846)
if "particle_21 geometry" not in marker_sets:
  s=new_marker_set('particle_21 geometry')
  marker_sets["particle_21 geometry"]=s
s= marker_sets["particle_21 geometry"]
mark=s.place_marker((4533.67, 4241.81, 7953.91), (0.7, 0.7, 0.7), 846)
if "particle_22 geometry" not in marker_sets:
  s=new_marker_set('particle_22 geometry')
  marker_sets["particle_22 geometry"]=s
s= marker_sets["particle_22 geometry"]
mark=s.place_marker((2580.55, 5022.19, 7045.82), (0.7, 0.7, 0.7), 846)
if "particle_23 geometry" not in marker_sets:
  s=new_marker_set('particle_23 geometry')
  marker_sets["particle_23 geometry"]=s
s= marker_sets["particle_23 geometry"]
mark=s.place_marker((3166.86, 5259.89, 7402.11), (0.7, 0.7, 0.7), 846)
if "particle_24 geometry" not in marker_sets:
  s=new_marker_set('particle_24 geometry')
  marker_sets["particle_24 geometry"]=s
s= marker_sets["particle_24 geometry"]
mark=s.place_marker((5465.51, 5038.58, 7474.03), (0.7, 0.7, 0.7), 846)
if "particle_25 geometry" not in marker_sets:
  s=new_marker_set('particle_25 geometry')
  marker_sets["particle_25 geometry"]=s
s= marker_sets["particle_25 geometry"]
mark=s.place_marker((3934.65, 4976.44, 6102.17), (0.7, 0.7, 0.7), 846)
if "particle_26 geometry" not in marker_sets:
  s=new_marker_set('particle_26 geometry')
  marker_sets["particle_26 geometry"]=s
s= marker_sets["particle_26 geometry"]
mark=s.place_marker((2053.71, 5217.72, 6244.22), (0.7, 0.7, 0.7), 846)
if "particle_27 geometry" not in marker_sets:
  s=new_marker_set('particle_27 geometry')
  marker_sets["particle_27 geometry"]=s
s= marker_sets["particle_27 geometry"]
mark=s.place_marker((3188.08, 5248.89, 6867.09), (0.7, 0.7, 0.7), 846)
if "particle_28 geometry" not in marker_sets:
  s=new_marker_set('particle_28 geometry')
  marker_sets["particle_28 geometry"]=s
s= marker_sets["particle_28 geometry"]
mark=s.place_marker((4197.08, 5724.29, 8247.9), (0.7, 0.7, 0.7), 846)
if "particle_29 geometry" not in marker_sets:
  s=new_marker_set('particle_29 geometry')
  marker_sets["particle_29 geometry"]=s
s= marker_sets["particle_29 geometry"]
mark=s.place_marker((3021.43, 5200.42, 7331.54), (0.7, 0.7, 0.7), 846)
if "particle_30 geometry" not in marker_sets:
  s=new_marker_set('particle_30 geometry')
  marker_sets["particle_30 geometry"]=s
s= marker_sets["particle_30 geometry"]
mark=s.place_marker((3870.97, 6232.51, 6910.17), (0, 1, 0), 846)
if "particle_31 geometry" not in marker_sets:
  s=new_marker_set('particle_31 geometry')
  marker_sets["particle_31 geometry"]=s
s= marker_sets["particle_31 geometry"]
mark=s.place_marker((3734.25, 6201.71, 5325.92), (0.7, 0.7, 0.7), 846)
if "particle_32 geometry" not in marker_sets:
  s=new_marker_set('particle_32 geometry')
  marker_sets["particle_32 geometry"]=s
s= marker_sets["particle_32 geometry"]
mark=s.place_marker((3756.07, 6075.46, 5769.78), (0.7, 0.7, 0.7), 846)
if "particle_33 geometry" not in marker_sets:
  s=new_marker_set('particle_33 geometry')
  marker_sets["particle_33 geometry"]=s
s= marker_sets["particle_33 geometry"]
mark=s.place_marker((4655.81, 6196.4, 5723.54), (0.7, 0.7, 0.7), 846)
if "particle_34 geometry" not in marker_sets:
  s=new_marker_set('particle_34 geometry')
  marker_sets["particle_34 geometry"]=s
s= marker_sets["particle_34 geometry"]
mark=s.place_marker((4641.87, 4566.93, 6241.74), (0.7, 0.7, 0.7), 846)
if "particle_35 geometry" not in marker_sets:
  s=new_marker_set('particle_35 geometry')
  marker_sets["particle_35 geometry"]=s
s= marker_sets["particle_35 geometry"]
mark=s.place_marker((4543.22, 5365.41, 4903.53), (0.7, 0.7, 0.7), 846)
if "particle_36 geometry" not in marker_sets:
  s=new_marker_set('particle_36 geometry')
  marker_sets["particle_36 geometry"]=s
s= marker_sets["particle_36 geometry"]
mark=s.place_marker((6611.6, 4521.67, 6786.37), (1, 0.7, 0), 846)
if "particle_37 geometry" not in marker_sets:
  s=new_marker_set('particle_37 geometry')
  marker_sets["particle_37 geometry"]=s
s= marker_sets["particle_37 geometry"]
mark=s.place_marker((4743.87, 4381.38, 4824.58), (0.7, 0.7, 0.7), 846)
if "particle_38 geometry" not in marker_sets:
  s=new_marker_set('particle_38 geometry')
  marker_sets["particle_38 geometry"]=s
s= marker_sets["particle_38 geometry"]
mark=s.place_marker((5553.6, 5569.06, 5239.82), (0.7, 0.7, 0.7), 846)
if "particle_39 geometry" not in marker_sets:
  s=new_marker_set('particle_39 geometry')
  marker_sets["particle_39 geometry"]=s
s= marker_sets["particle_39 geometry"]
mark=s.place_marker((4489.84, 5879.23, 3098.79), (1, 0.7, 0), 846)
if "particle_40 geometry" not in marker_sets:
  s=new_marker_set('particle_40 geometry')
  marker_sets["particle_40 geometry"]=s
s= marker_sets["particle_40 geometry"]
mark=s.place_marker((6042.23, 6581.42, 4407.08), (0.7, 0.7, 0.7), 846)
if "particle_41 geometry" not in marker_sets:
  s=new_marker_set('particle_41 geometry')
  marker_sets["particle_41 geometry"]=s
s= marker_sets["particle_41 geometry"]
mark=s.place_marker((6134.16, 7532.83, 3143.37), (0.7, 0.7, 0.7), 846)
if "particle_42 geometry" not in marker_sets:
  s=new_marker_set('particle_42 geometry')
  marker_sets["particle_42 geometry"]=s
s= marker_sets["particle_42 geometry"]
mark=s.place_marker((5508.34, 7262.26, 3307.62), (0.7, 0.7, 0.7), 846)
if "particle_43 geometry" not in marker_sets:
  s=new_marker_set('particle_43 geometry')
  marker_sets["particle_43 geometry"]=s
s= marker_sets["particle_43 geometry"]
mark=s.place_marker((5928.61, 7056.63, 3227.61), (0.7, 0.7, 0.7), 846)
if "particle_44 geometry" not in marker_sets:
  s=new_marker_set('particle_44 geometry')
  marker_sets["particle_44 geometry"]=s
s= marker_sets["particle_44 geometry"]
mark=s.place_marker((4991.52, 7466.62, 2716.97), (0.7, 0.7, 0.7), 846)
if "particle_45 geometry" not in marker_sets:
  s=new_marker_set('particle_45 geometry')
  marker_sets["particle_45 geometry"]=s
s= marker_sets["particle_45 geometry"]
mark=s.place_marker((5439.38, 6834.77, 2987.91), (0.7, 0.7, 0.7), 846)
if "particle_46 geometry" not in marker_sets:
  s=new_marker_set('particle_46 geometry')
  marker_sets["particle_46 geometry"]=s
s= marker_sets["particle_46 geometry"]
mark=s.place_marker((5922.54, 7891.4, 2624.56), (0.7, 0.7, 0.7), 846)
if "particle_47 geometry" not in marker_sets:
  s=new_marker_set('particle_47 geometry')
  marker_sets["particle_47 geometry"]=s
s= marker_sets["particle_47 geometry"]
mark=s.place_marker((5644.49, 7592.42, 1801.28), (0.7, 0.7, 0.7), 846)
if "particle_48 geometry" not in marker_sets:
  s=new_marker_set('particle_48 geometry')
  marker_sets["particle_48 geometry"]=s
s= marker_sets["particle_48 geometry"]
mark=s.place_marker((6192.85, 7379.89, 1698.71), (0.7, 0.7, 0.7), 846)
if "particle_49 geometry" not in marker_sets:
  s=new_marker_set('particle_49 geometry')
  marker_sets["particle_49 geometry"]=s
s= marker_sets["particle_49 geometry"]
mark=s.place_marker((7097.56, 6079.7, 2801.87), (0.7, 0.7, 0.7), 846)
if "particle_50 geometry" not in marker_sets:
  s=new_marker_set('particle_50 geometry')
  marker_sets["particle_50 geometry"]=s
s= marker_sets["particle_50 geometry"]
mark=s.place_marker((5794.66, 7139.87, 3284.34), (0.7, 0.7, 0.7), 846)
if "particle_51 geometry" not in marker_sets:
  s=new_marker_set('particle_51 geometry')
  marker_sets["particle_51 geometry"]=s
s= marker_sets["particle_51 geometry"]
mark=s.place_marker((6807.49, 5766.46, 2459.03), (0, 1, 0), 846)
if "particle_52 geometry" not in marker_sets:
  s=new_marker_set('particle_52 geometry')
  marker_sets["particle_52 geometry"]=s
s= marker_sets["particle_52 geometry"]
mark=s.place_marker((6945.42, 9076.64, 3369.32), (0.7, 0.7, 0.7), 846)
if "particle_53 geometry" not in marker_sets:
  s=new_marker_set('particle_53 geometry')
  marker_sets["particle_53 geometry"]=s
s= marker_sets["particle_53 geometry"]
mark=s.place_marker((5926.43, 7057.57, 2567.08), (0.7, 0.7, 0.7), 846)
if "particle_54 geometry" not in marker_sets:
  s=new_marker_set('particle_54 geometry')
  marker_sets["particle_54 geometry"]=s
s= marker_sets["particle_54 geometry"]
mark=s.place_marker((5987.36, 6355.89, 1519.84), (0.7, 0.7, 0.7), 846)
if "particle_55 geometry" not in marker_sets:
  s=new_marker_set('particle_55 geometry')
  marker_sets["particle_55 geometry"]=s
s= marker_sets["particle_55 geometry"]
mark=s.place_marker((6014.84, 7399.39, 2854.59), (0.7, 0.7, 0.7), 846)
if "particle_56 geometry" not in marker_sets:
  s=new_marker_set('particle_56 geometry')
  marker_sets["particle_56 geometry"]=s
s= marker_sets["particle_56 geometry"]
mark=s.place_marker((6442.75, 6428.3, 3619), (0.7, 0.7, 0.7), 846)
if "particle_57 geometry" not in marker_sets:
  s=new_marker_set('particle_57 geometry')
  marker_sets["particle_57 geometry"]=s
s= marker_sets["particle_57 geometry"]
mark=s.place_marker((5900.75, 7083.12, 1724.24), (0.7, 0.7, 0.7), 846)
if "particle_58 geometry" not in marker_sets:
  s=new_marker_set('particle_58 geometry')
  marker_sets["particle_58 geometry"]=s
s= marker_sets["particle_58 geometry"]
mark=s.place_marker((6814.95, 7339.54, 3236.67), (0.7, 0.7, 0.7), 846)
if "particle_59 geometry" not in marker_sets:
  s=new_marker_set('particle_59 geometry')
  marker_sets["particle_59 geometry"]=s
s= marker_sets["particle_59 geometry"]
mark=s.place_marker((6269.12, 5875.99, 2174.21), (0.7, 0.7, 0.7), 846)
if "particle_60 geometry" not in marker_sets:
  s=new_marker_set('particle_60 geometry')
  marker_sets["particle_60 geometry"]=s
s= marker_sets["particle_60 geometry"]
mark=s.place_marker((7289.85, 6826.98, 1067.67), (0.7, 0.7, 0.7), 846)
if "particle_61 geometry" not in marker_sets:
  s=new_marker_set('particle_61 geometry')
  marker_sets["particle_61 geometry"]=s
s= marker_sets["particle_61 geometry"]
mark=s.place_marker((8157.03, 5636.29, 2506.82), (0, 1, 0), 846)
if "particle_62 geometry" not in marker_sets:
  s=new_marker_set('particle_62 geometry')
  marker_sets["particle_62 geometry"]=s
s= marker_sets["particle_62 geometry"]
mark=s.place_marker((9432.95, 4943.57, 3971.23), (0.7, 0.7, 0.7), 846)
if "particle_63 geometry" not in marker_sets:
  s=new_marker_set('particle_63 geometry')
  marker_sets["particle_63 geometry"]=s
s= marker_sets["particle_63 geometry"]
mark=s.place_marker((8495.79, 6442.97, 3055.75), (0.7, 0.7, 0.7), 846)
if "particle_64 geometry" not in marker_sets:
  s=new_marker_set('particle_64 geometry')
  marker_sets["particle_64 geometry"]=s
s= marker_sets["particle_64 geometry"]
mark=s.place_marker((7507.29, 8514.44, 2473.1), (0.7, 0.7, 0.7), 846)
if "particle_65 geometry" not in marker_sets:
  s=new_marker_set('particle_65 geometry')
  marker_sets["particle_65 geometry"]=s
s= marker_sets["particle_65 geometry"]
mark=s.place_marker((8747.95, 7272.88, 1640.74), (0.7, 0.7, 0.7), 846)
if "particle_66 geometry" not in marker_sets:
  s=new_marker_set('particle_66 geometry')
  marker_sets["particle_66 geometry"]=s
s= marker_sets["particle_66 geometry"]
mark=s.place_marker((8361.72, 8274.53, 1662.48), (0.7, 0.7, 0.7), 846)
if "particle_67 geometry" not in marker_sets:
  s=new_marker_set('particle_67 geometry')
  marker_sets["particle_67 geometry"]=s
s= marker_sets["particle_67 geometry"]
mark=s.place_marker((8131.53, 8281.89, 3477.29), (0.7, 0.7, 0.7), 846)
if "particle_68 geometry" not in marker_sets:
  s=new_marker_set('particle_68 geometry')
  marker_sets["particle_68 geometry"]=s
s= marker_sets["particle_68 geometry"]
mark=s.place_marker((10131.4, 8585.56, 3776.89), (0.7, 0.7, 0.7), 846)
if "particle_69 geometry" not in marker_sets:
  s=new_marker_set('particle_69 geometry')
  marker_sets["particle_69 geometry"]=s
s= marker_sets["particle_69 geometry"]
mark=s.place_marker((9071.13, 8461.84, 3335.53), (0.7, 0.7, 0.7), 846)
if "particle_70 geometry" not in marker_sets:
  s=new_marker_set('particle_70 geometry')
  marker_sets["particle_70 geometry"]=s
s= marker_sets["particle_70 geometry"]
mark=s.place_marker((9809.6, 8087.15, 1603.46), (0.7, 0.7, 0.7), 846)
if "particle_71 geometry" not in marker_sets:
  s=new_marker_set('particle_71 geometry')
  marker_sets["particle_71 geometry"]=s
s= marker_sets["particle_71 geometry"]
mark=s.place_marker((8879.87, 7855.72, 3540.57), (0, 1, 0), 846)
if "particle_72 geometry" not in marker_sets:
  s=new_marker_set('particle_72 geometry')
  marker_sets["particle_72 geometry"]=s
s= marker_sets["particle_72 geometry"]
mark=s.place_marker((9850.8, 7274.64, 2651.05), (0.7, 0.7, 0.7), 846)
if "particle_73 geometry" not in marker_sets:
  s=new_marker_set('particle_73 geometry')
  marker_sets["particle_73 geometry"]=s
s= marker_sets["particle_73 geometry"]
mark=s.place_marker((8807.36, 8460.09, 2052.42), (0.7, 0.7, 0.7), 846)
if "particle_74 geometry" not in marker_sets:
  s=new_marker_set('particle_74 geometry')
  marker_sets["particle_74 geometry"]=s
s= marker_sets["particle_74 geometry"]
mark=s.place_marker((9886.32, 7148.38, 3077.91), (0, 1, 0), 846)
for k in surf_sets.keys():
  chimera.openModels.add([surf_sets[k]])
