Update jolma_split.py
Browse files- jolma_split.py +4 -1
jolma_split.py
CHANGED
@@ -53,6 +53,9 @@ PROTEIN_INFO_FILE = _DOWNLODE_MANAGER.download(f"{_RESOURCE_URL}/ERP001824-Unipr
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pattern = re.compile("(\d+)")
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URL = "https://huggingface.co/datasets/thewall/jolma_split/resolve/main"
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class JolmaSplitConfig(datasets.BuilderConfig):
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def __init__(self, protein_prefix="", protein_suffix="", max_length=1000, max_gene_num=1,
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@@ -73,7 +76,7 @@ class JolmaSubset(datasets.GeneratorBasedBuilder):
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PROTEIN_INFO = pd.read_excel(PROTEIN_INFO_FILE, index_col=0)
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BUILDER_CONFIGS = [
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-
JolmaSplitConfig(name=key) for key in ["p70c10s61087t100", "p99c3s325414t1000"]
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]
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DEFAULT_CONFIG_NAME = "p70c10s61087t100"
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pattern = re.compile("(\d+)")
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URL = "https://huggingface.co/datasets/thewall/jolma_split/resolve/main"
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"""
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p70c10s61087t100 p70:70种蛋白,c10:count>10的序列,s61087:总共61087条序列,t100:小于100条序列的蛋白质划分至训练集
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"""
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class JolmaSplitConfig(datasets.BuilderConfig):
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def __init__(self, protein_prefix="", protein_suffix="", max_length=1000, max_gene_num=1,
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PROTEIN_INFO = pd.read_excel(PROTEIN_INFO_FILE, index_col=0)
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BUILDER_CONFIGS = [
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JolmaSplitConfig(name=key) for key in ["p70c10s61087t100", "p99c3s325414t1000", "p70c3s312303t100"]
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]
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DEFAULT_CONFIG_NAME = "p70c10s61087t100"
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