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Further pathogens of urinary tract infections: 1  Anaerobic Gram-positive pathogens: Peptococcus and Peptostreptococcus. 2  Neisseria gonorrhoeae. 3  Mycobacterium tuberculosis. 4  Fungi, most commonly Candida species (total 5% of UTI), and Aspergillus.
And about 5% or less of urinary tract infections are caused by other bacteria. Gram-negative microorganisms causing UTIs include Proteus, Klebsiella, Citrobacter, Enterobacter, and Pseudomonas spp. Gram-positive microorganisms such as Enterococcus faecalis can also infect the urinary tract.