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Further pathogens of urinary tract infections: 1  Anaerobic Gram-positive pathogens: Peptococcus and Peptostreptococcus. 2  Neisseria gonorrhoeae. 3  Mycobacterium tuberculosis. 4  Fungi, most commonly Candida species (total 5% of UTI), and Aspergillus.
Causes of urinary tract infections. The vast majority of UTI cases are caused by the bacterium Escherichia coli (E. coli), usually found in the digestive system. Chlamydia and Mycoplasma bacteria can infect the urethra but not the bladder.