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For Eukaryotes the electron transport chain occurs in the Inner Membrane of a mitochondria. (mitochondria has 2 membranes both outer and inner). For Prokaryotes, it occurs in the plasma membrane as prokaryotes do not have mitochondria.
Copyright Â© Gary E. Kaiser. NADH and FADH 2 carry protons (H +) and electrons (e -) to the electron transport chain located in the membrane. The energy from the transfer of electrons along the chain transports protons across the membrane and creates an electrochemical gradient.t the end of the electron transport system, two protons, two electrons, and half of an oxygen molecule combine to form water. Since oxygen is the final electron acceptor, the process is called aerobic respiration.