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Regions of the brain that may be affected by depression include the hypothalamus, hippocampus, anterior cingulate gyrus, amygdala, and all parts of the limbic system (which is involved with emotion formation as well as processing, learning, and memory). Certain parts of the brain associated with emotion, memory, and learning, particularly the prefrontal cortex and the hippocampus, can shrink in size. 2  This might explain some of the emotional changes observed in people with depression.
The causes of depression are not fully understood, but scientists think that an imbalance in the brain's signaling chemicals may be responsible for the condition in many patients. However, there are several theories about what this imbalance actually is and which signaling chemicals are involved.