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Gastrointestinal Causes of Yellow Diarrhea. There are a few disorders of the stomach and bowel which can cause yellow diarrhea. It can be quite complicated to make a diagnosis as the symptoms can overlap, therefore if you develop yellow diarrhea and you have other symptoms you should see a doctor and have some tests done.
The obstruction to the flow of bile causes backup of bile into the blood resulting in yellowness of skin and eyes that is referred to as jaundice. Yellow stool as a result of undigested fat also may occur with no symptoms.