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The biggest cause for a short luteal phase is having low levels of the hormone progesterone. If you have a short luteal phase and it causes a miscarriage, your health care provider may wish to do a progesterone test just after ovulation to help figure out how short your luteal phase is.
In most cases, a luteal phase defect is attributable to low progesterone levels or insufficient/unsustained progesterone production by the corpus luteum. With the decrease of progesterone, the uterine lining begins to break down (or will not develop properly in the first place) and menstruation takes place.