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Most calcium carbonate deposits are made up of the skeletal remains of marine plants and animals that have fallen to sediment on the bottom of shallow seas after their death. If the conditions are right, these sediments can build up over geological time to form extremely thick layers.
There seems to be no good correlation between temperature and the rate of reef growth. Perhaps the higher rate of production of skeletal calcium carbonate is offset by the production of weaker skeletons which are more quickly eroded; however, there are too many facets to this issue to give it unambiguous support.