#!/bin/bash source scripts/utils.sh echo -n function activate_gitannex { _conda_env=$(git config --file scripts/config/datalad_config --get datalad.conda.conda-env || echo -n) if [[ ! -z "${_conda_env}" ]] then _modules=$(git config --file scripts/config/datalad_config --get datalad.conda.modules || echo -n) if [[ -z "$(which conda)" ]] && [[ ! -z "${_modules}" ]] then module load ${_modules} 2>/dev/null eval "$(conda shell.bash hook)" fi conda activate ${_conda_env} >/dev/null 2>&1 || eval "$(conda shell.bash hook)" conda activate ${_conda_env} exit_on_error_code "Failed to init git-annex conda env" fi } function install_datalad { init_venv --name venv --prefix .tmp/ exit_on_error_code "Failed to init venv" datalad --version >/dev/null 2>&1 || python3 -m pip install -r scripts/requirements_datalad.txt exit_on_error_code "Failed to install datalad requirements: pip install" } which git-annex || activate_gitannex datalad --version >/dev/null 2>&1 || install_datalad exit_on_error_code "Failed to install datalad requirements: pip install" # Add bin to PATH [[ -d "$(realpath bin/)" ]] && export PATH="${PATH}:$(realpath bin)" datalad "$@"