CHAMPS De-identified Dataset, v4.2
<|begin_of_text|><|start_header_id|>system<|end_header_id|> You are a research archivist expert in dataset metadata. Answer the question truthfully.  <|eot_id|><|start_header_id|>user<|end_header_id|> Here is the Description of a dataset. Description:'(rev. 2021-04-01) Request dataset here: https://champshealth.org/data-access/ Version 4.2 of the standard, de-identified CHAMPS dataset included these files: case demographics (including MITS measurements), verbal autopsy, DeCoDe results, TAC results, and lab results. One new column (site_iso_code) was added to this dataset to the file CHAMPS_deid_basic_demographics.csv. This dataset is updated monthly. The version of this dataset changes quarterly when a revised ICD-10 mapping document is uploaded.</br' . Please return only a json list of at most 3 Keywords corresponding to the Description:.<|eot_id|><|start_header_id|>assistant<|end_header_id|> {"Answer" : ["Anemias","Assays: Bordatella spp., C. difficile, C. diphtheria, H. influenzae, Arenavirus/Lassa Fever, MERS coronavirus, Salmonella spp., V. cholerae, Acinetobacter baumannii, Adenovirus, Adenovirus 40/41, Aeromonas spp., Ascaris lumbricoides, Astrovirus, Bartonella spp.","Bordetella parapertussi, Bordetella bronchiseptica","Bordetella pertussis, Bordetella holmseii","Bordetella pertussis (pertussis toxin), Brucellaspp., Burkholderia pseudomallei, C. difficile paLOC, C. difficile tcdA, C. difficile tcdB, Campylobacter coli, Campylobacter jejuni, Candida albicans, Crimean-Congo Hemorrhagic Fever virus (CCHF), Chikungunya virus, Chlamydia pneumoniae, Chlamydia trachomatis, Corynebacterium diptheriae","Corynebacterium ulcerans, Corynebacterium pseudotuberculosis","Corynebactrium spp. (tox gene), Coxiella burnettii","Cryptococcus neoformans, Cryptococcus gattii","Cryptosporidium parvum, Cytomegalovirus (CMV), Dengue (pan), Entamoeba histolytica, Escherichia coli (aaiC gene), Escherichia coli (aatA gene), Enterococcus facium, Enterococcus faecalis, Enterovirus, Escherichia coli (bfpA gene), Escherichia coli (eae gene), Escherichia coli/Shigella, Escherichia coli (heat-labile enterotoxin), Escherichia coli (heat-stable enterotoxin)","Bacterial Infections and Mycoses","Birth Trauma","Cancer","Cardiovascular Diseases","Cervical Insufficiency and Pelvic Anomalies","Cesarean Delivery","Chemically-Induced Disorders","Chorioamnionitis and Membrane Complications","Congenital Birth Defects","Congenital, Hereditary, and Neonatal Diseases and Abnormalities","Congenital Infection","Diarrheal Diseases","Digestive System Diseases","Disorders of Environmental Origin","Endocrine System Diseases","Epilepsy","Eye Diseases","Female Urogenital Diseases and Pregnancy Complications","Giardia spp, Group A Streptococcus, Group B Streptococcus, Haemophilus influenzae, Haemophilus influenzae type B, Human coronavirus 1 (229E), Human coronavirus 2 (NL63), Human coronavirus 3 (OC43), Human coronavirus 4 (HKU1), Hepatitis E virus, Human metapneumovirus (HMPV), Herpes simplex virus 1 (HSV1), Herpes simplex virus 2 (HSV2), Human nucleic acid control (Rnase P), Influenza A, Influenza B, Internal Positive Control (IPC), Japanese encephalitis virus, Klebsiella pneumoniae","PAN Lassa Fever Virus, can cross react with other arenavirus","Lassa Fever Virus target 1 and target 2, Leptospira (pan-serovar), Listeria monocytogenes, Measles, MERS coronavirus (N gene), MERS coronavirus (upE gene), Moraxella catarrhalis, Mumps, MS2 phage for extraction control, Mycobacterium tuberculosis, Mycoplasma pneumoniae, Neisseria gonorrhoeae, Neisseria meningitidis, Nipah virus, Norovirus GI, Norovirus GII, Orientia tsutsugamushi, Parechovirus, Parvovirus B19 VP2","Parainfluenza virus type 1, type 2, type 3 and type 4","Plasmodium falciparum, Plasmodium vivax, Pneumocystis jirovecii, Pseudomonas aeruginosa, Respiratory syncytical virus (RSV), Rhinovirus, Rickettsia spp., Rift Valley Fever, Rotavirus A, Rotavirus B, Rotavirus C","Global Health","Heart Diseases","Hemic and Lymphatic Diseases","HIV","Immune System Diseases","Injury","Kidney Disease","Liver Disease","Lower Respiratory Infections","Malaria","Malnutrition","Malpresentation Before Labor","Maternal Circulatory and Respiratory Diseases","Maternal Diabetes","Maternal HIV","Maternal Hypertension","Maternal Infection","Maternal Injury and Accident","Maternal Medication or Toxic Exposure","Maternal Nutritional Disorder","Maternal Surgical and Medical Procedures","Measles","Meningitis/Encephalitis","Motor Neuron Disease","Multiple Gestation","Musculoskeletal Diseases","Neonatal Aspiration Syndromes","Neonatal Encephalopathy","Neonatal Preterm Birth Complications","Neonatal Sepsis","Neoplasms","Nervous System Diseases","Nutritional and Metabolic Diseases","Obstructed Labor and Fetal Malpresentation","Other Disorders of Fluid, Electrolyte and Acid-Base Balance","Other Endocrine, Metabolic, Blood and Immune Disorders","Other Gastrointestinal Disease","Other Immunodeficiencies","Other Infections","Other Injury","Other Labor and Delivery Complications","Other Maternal Factor","Other Neonatal Disorders","Other Neurological Disorders","Other Nutritional Deficiencies","Other Respiratory Diseases","Other Skin and Subcutaneous Diseases","Paralytic Ileus and Intestinal Obstruction","Parasitic Diseases","Pathological Conditions, Signs and Symptoms","Perinatal Asphyxia/Hypoxia","Placental Complications","Poisoning","Premature Rupture of Membranes","Preterm Labor or Delivery","Prolapsed Cord","Public Health","Respiratory Tract Diseases","Road Injuries","Sepsis","Sickle Cell Disorders","Skin and Connective Tissue Diseases","Spontaneous Abortion","Stomatognathic Diseases","Sudden Infant Death Syndrome (SIDS)","Syphilis","Tuberculosis (TB)","Umbilical Cord Complications","Upper Respiratory Infections","Uterine Fluid Disorders","Uterine Rupture","Virus Diseases","Wounds and Injuries"]} <|eot_id|>
 Here is the Description of a dataset. Description:'(rev. 2021-04-01) Request dataset here: https://champshealth.org/data-access/ Version 4.2 of the standard, de-identified CHAMPS dataset included these files: case demographics (including MITS measurements), verbal autopsy, DeCoDe results, TAC results, and lab results. One new column (site_iso_code) was added to this dataset to the file CHAMPS_deid_basic_demographics.csv. This dataset is updated monthly. The version of this dataset changes quarterly when a revised ICD-10 mapping document is uploaded.</br' . Please return only a json list of at most 3 Keywords corresponding to the Description:.
(rev. 2021-04-01) Request dataset here: https://champshealth.org/data-access/ Version 4.2 of the standard, de-identified CHAMPS dataset included these files: case demographics (including MITS measurements), verbal autopsy, DeCoDe results, TAC results, and lab results. One new column (site_iso_code) was added to this dataset to the file CHAMPS_deid_basic_demographics.csv. This dataset is updated monthly. The version of this dataset changes quarterly when a revised ICD-10 mapping document is uploaded.</br
Anemias; Assays: Bordatella spp., C. difficile, C. diphtheria, H. influenzae, Arenavirus/Lassa Fever, MERS coronavirus, Salmonella spp., V. cholerae, Acinetobacter baumannii, Adenovirus, Adenovirus 40/41, Aeromonas spp., Ascaris lumbricoides, Astrovirus, Bartonella spp.; Bordetella parapertussi, Bordetella bronchiseptica; Bordetella pertussis, Bordetella holmseii; Bordetella pertussis (pertussis toxin), Brucellaspp., Burkholderia pseudomallei, C. difficile paLOC, C. difficile tcdA, C. difficile tcdB, Campylobacter coli, Campylobacter jejuni, Candida albicans, Crimean-Congo Hemorrhagic Fever virus (CCHF), Chikungunya virus, Chlamydia pneumoniae, Chlamydia trachomatis, Corynebacterium diptheriae; Corynebacterium ulcerans, Corynebacterium pseudotuberculosis; Corynebactrium spp. (tox gene), Coxiella burnettii; Cryptococcus neoformans, Cryptococcus gattii; Cryptosporidium parvum, Cytomegalovirus (CMV), Dengue (pan), Entamoeba histolytica, Escherichia coli (aaiC gene), Escherichia coli (aatA gene), Enterococcus facium, Enterococcus faecalis, Enterovirus, Escherichia coli (bfpA gene), Escherichia coli (eae gene), Escherichia coli/Shigella, Escherichia coli (heat-labile enterotoxin), Escherichia coli (heat-stable enterotoxin); Bacterial Infections and Mycoses; Birth Trauma; Cancer; Cardiovascular Diseases; Cervical Insufficiency and Pelvic Anomalies; Cesarean Delivery; Chemically-Induced Disorders; Chorioamnionitis and Membrane Complications; Congenital Birth Defects; Congenital, Hereditary, and Neonatal Diseases and Abnormalities; Congenital Infection; Diarrheal Diseases; Digestive System Diseases; Disorders of Environmental Origin; Endocrine System Diseases; Epilepsy; Eye Diseases; Female Urogenital Diseases and Pregnancy Complications; Giardia spp, Group A Streptococcus, Group B Streptococcus, Haemophilus influenzae, Haemophilus influenzae type B, Human coronavirus 1 (229E), Human coronavirus 2 (NL63), Human coronavirus 3 (OC43), Human coronavirus 4 (HKU1), Hepatitis E virus, Human metapneumovirus (HMPV), Herpes simplex virus 1 (HSV1), Herpes simplex virus 2 (HSV2), Human nucleic acid control (Rnase P), Influenza A, Influenza B, Internal Positive Control (IPC), Japanese encephalitis virus, Klebsiella pneumoniae; PAN Lassa Fever Virus, can cross react with other arenavirus; Lassa Fever Virus target 1 and target 2, Leptospira (pan-serovar), Listeria monocytogenes, Measles, MERS coronavirus (N gene), MERS coronavirus (upE gene), Moraxella catarrhalis, Mumps, MS2 phage for extraction control, Mycobacterium tuberculosis, Mycoplasma pneumoniae, Neisseria gonorrhoeae, Neisseria meningitidis, Nipah virus, Norovirus GI, Norovirus GII, Orientia tsutsugamushi, Parechovirus, Parvovirus B19 VP2; Parainfluenza virus type 1, type 2, type 3 and type 4; Plasmodium falciparum, Plasmodium vivax, Pneumocystis jirovecii, Pseudomonas aeruginosa, Respiratory syncytical virus (RSV), Rhinovirus, Rickettsia spp., Rift Valley Fever, Rotavirus A, Rotavirus B, Rotavirus C; Global Health; Heart Diseases; Hemic and Lymphatic Diseases; HIV; Immune System Diseases; Injury; Kidney Disease; Liver Disease; Lower Respiratory Infections; Malaria; Malnutrition; Malpresentation Before Labor; Maternal Circulatory and Respiratory Diseases; Maternal Diabetes; Maternal HIV; Maternal Hypertension; Maternal Infection; Maternal Injury and Accident; Maternal Medication or Toxic Exposure; Maternal Nutritional Disorder; Maternal Surgical and Medical Procedures; Measles; Meningitis/Encephalitis; Motor Neuron Disease; Multiple Gestation; Musculoskeletal Diseases; Neonatal Aspiration Syndromes; Neonatal Encephalopathy; Neonatal Preterm Birth Complications; Neonatal Sepsis; Neoplasms; Nervous System Diseases; Nutritional and Metabolic Diseases; Obstructed Labor and Fetal Malpresentation; Other Disorders of Fluid, Electrolyte and Acid-Base Balance; Other Endocrine, Metabolic, Blood and Immune Disorders; Other Gastrointestinal Disease; Other Immunodeficiencies; Other Infections; Other Injury; Other Labor and Delivery Complications; Other Maternal Factor; Other Neonatal Disorders; Other Neurological Disorders; Other Nutritional Deficiencies; Other Respiratory Diseases; Other Skin and Subcutaneous Diseases; Paralytic Ileus and Intestinal Obstruction; Parasitic Diseases; Pathological Conditions, Signs and Symptoms; Perinatal Asphyxia/Hypoxia; Placental Complications; Poisoning; Premature Rupture of Membranes; Preterm Labor or Delivery; Prolapsed Cord; Public Health; Respiratory Tract Diseases; Road Injuries; Sepsis; Sickle Cell Disorders; Skin and Connective Tissue Diseases; Spontaneous Abortion; Stomatognathic Diseases; Sudden Infant Death Syndrome (SIDS); Syphilis; Tuberculosis (TB); Umbilical Cord Complications; Upper Respiratory Infections; Uterine Fluid Disorders; Uterine Rupture; Virus Diseases; Wounds and Injuries