Bacteria from the Marinitoga genus are thermophilic, anaerobic, and organotrophic microorganisms isolated from various hot environments such as deep-sea hydrothermal vents or costal thermal springs. Among the five Marinitoga species described (1–5), only the M. piezophila KA3 genome has been sequenced (6). Here, we present the draft genome sequences of two novel Marinitoga camini isolates, DV1155 and DV1197, both containing proviral sequences.