Dynamic tissue‐specific gene co‐expression clusters. (a) Five clusters were generated using Fuzzy C‐means soft clustering algorithm implemented in Mfuzz. Data points on the X‐axis represent root (RT), developing seed (DSD), stem and peduncles (ST_PD), leaf and petioles (LF_PT), flowers (FL) tissues, respectively. The Y‐axis represents gene expression values, where gene expression values were standardized to have zero mean and one standard deviation. (b) The scatterplot generated using REVIGO web browser shows the cluster representatives (i.e. terms remaining after the redundancy reduction) for leaf and petiole tissue‐enriched Cluster 2 biological processes in a two‐dimensional space derived by applying multidimensional scaling to a matrix of the GO terms’ semantic similarities. Bubble colour indicates the P‐value (legend in upper left‐hand corner); size indicates the frequency of the GO term in the wholeUniProt GOA database (bubbles of more general terms are larger).