On January 18, 1988 Kimura and Fujinami reunited to win the IWGP Tag Team titles from Kazuo Yamazaki and Yoshiaki Fujiwara. The team's third reign ended on June 10, 1988 at the hands of Riki Choshu and Masa Saito, with the two not winning the title again until approximately nine years later when they defeated Hiroyoshi Tenzan and Masahiro Chono on January 4, 1997. Later that year Kimura teamed up with Takashi Ishikawa to capture Big Japan Pro Wrestling's inaugural BJW Tag Team Championship. In the 1990s, he was part of Shiro Koshinaka's Heisei Ishingun faction, alongside Kuniaki Kobayashi, Akitoshi Saito, Tatsutoshi Goto, Akira Nogami, and Michiyoshi Ohara. In early 2003 Kengo Kimura announced that he would retire at the end of the "Kengo Kimura Inazuma Countdown Tour". Kimura's retirement match took place on March 23, 2003 where he wrestled Osamu Nishimura to a time limit draw. Since his official retirement Kimura has only made one or two "special appearances" in the wrestling ring.