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arxiv/1-7/index.json

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19061521, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00024.mds", "bytes": 67062335, "hashes": {}}, "samples": 1209, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00024.mds.zstd", "bytes": 19228918, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00025.mds", "bytes": 67074095, "hashes": {}}, "samples": 1189, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00025.mds.zstd", "bytes": 19009292, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00026.mds", "bytes": 1713284, "hashes": {}}, "samples": 29, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00026.mds.zstd", "bytes": 478861, "hashes": {}}}], "version": 2}

arxiv/1-7/tokenize_output.log

@@ -0,0 +1,58 @@
+Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
+Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained.
+Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/1-7...
+Using tokenizer model bclavie/olmo_bert_template...
+Using 1 processes for tokenization, with 1000 items per process.
+
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 81, in sample_dataset_from_config
+    results = pool.map(process_func, chunks)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 367, in map
+    return self._map_async(func, iterable, mapstar, chunksize).get()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 768, in get
+    self.wait(timeout)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 765, in wait
+    self._event.wait(timeout)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/threading.py", line 607, in wait
+    signaled = self._cond.wait(timeout)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/threading.py", line 320, in wait
+    waiter.acquire()
+KeyboardInterrupt
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 64, in sample_dataset_from_config
+    with mp.Pool(num_processes) as pool:
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 739, in __exit__
+    self.terminate()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 657, in terminate
+    self._terminate()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 224, in __call__
+    res = self._callback(*self._args, **self._kwargs)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 732, in _terminate_pool
+    p.join()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
+    res = self._popen.wait(timeout)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
+    return self.poll(os.WNOHANG if timeout == 0.0 else 0)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
+    pid, sts = os.waitpid(self.pid, flag)
+KeyboardInterrupt
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
+    sample_dataset_from_config(args)
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 63, in sample_dataset_from_config
+    with MDSWriter(out=output_dir, columns=MDS_COLS_PRE_TOKENIZED, compression='zstd') as mds_writer:
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 354, in __exit__
+    self.finish()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 298, in finish
+    self.flush_shard()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 428, in flush_shard
+    raw_data = self.encode_joint_shard()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/mds/writer.py", line 143, in encode_joint_shard
+    sample_data = b''.join(self.new_samples)
+KeyboardInterrupt
+

arxiv/1-8/index.json

@@ -0,0 +1 @@
+{"shards": [{"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00000.mds", "bytes": 67074413, "hashes": {}}, "samples": 1194, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00000.mds.zstd", "bytes": 19111371, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00001.mds", "bytes": 67101366, "hashes": {}}, "samples": 1092, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00001.mds.zstd", "bytes": 18397889, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00002.mds", "bytes": 67103759, "hashes": {}}, "samples": 1171, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00002.mds.zstd", "bytes": 19118318, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00003.mds", "bytes": 67097248, "hashes": {}}, "samples": 1142, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00003.mds.zstd", "bytes": 19186786, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00004.mds", "bytes": 67106702, "hashes": {}}, "samples": 1223, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00004.mds.zstd", "bytes": 19347241, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00005.mds", "bytes": 67098257, "hashes": {}}, "samples": 1179, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00005.mds.zstd", "bytes": 19200718, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00006.mds", "bytes": 67099847, "hashes": {}}, "samples": 1179, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00006.mds.zstd", "bytes": 18992360, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00007.mds", "bytes": 67096337, "hashes": {}}, "samples": 1142, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00007.mds.zstd", "bytes": 19015486, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00008.mds", "bytes": 67049551, "hashes": {}}, "samples": 1168, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00008.mds.zstd", "bytes": 19146060, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00009.mds", "bytes": 67098220, "hashes": {}}, "samples": 1123, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00009.mds.zstd", "bytes": 18904656, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00010.mds", "bytes": 67077010, "hashes": {}}, "samples": 1190, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00010.mds.zstd", "bytes": 19041096, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00011.mds", "bytes": 67105213, "hashes": {}}, "samples": 1155, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00011.mds.zstd", "bytes": 19262109, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00012.mds", "bytes": 67086670, "hashes": {}}, "samples": 1151, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00012.mds.zstd", "bytes": 19058952, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00013.mds", "bytes": 66766218, "hashes": {}}, "samples": 1191, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00013.mds.zstd", "bytes": 19097296, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00014.mds", "bytes": 67073232, "hashes": {}}, "samples": 1161, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00014.mds.zstd", "bytes": 19027679, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00015.mds", "bytes": 67067933, "hashes": {}}, "samples": 1193, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00015.mds.zstd", "bytes": 18989067, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00016.mds", "bytes": 60960508, "hashes": {}}, "samples": 1107, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00016.mds.zstd", "bytes": 17583058, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00017.mds", "bytes": 67096917, "hashes": {}}, "samples": 1080, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00017.mds.zstd", "bytes": 18433875, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00018.mds", "bytes": 67072357, "hashes": {}}, "samples": 1223, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00018.mds.zstd", "bytes": 19151523, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00019.mds", "bytes": 67033430, "hashes": {}}, "samples": 1122, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00019.mds.zstd", "bytes": 18843830, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00020.mds", "bytes": 67102983, "hashes": {}}, "samples": 1113, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00020.mds.zstd", "bytes": 18975833, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00021.mds", "bytes": 66992280, "hashes": {}}, "samples": 1170, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00021.mds.zstd", "bytes": 19232726, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00022.mds", "bytes": 67025333, "hashes": {}}, "samples": 1120, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00022.mds.zstd", "bytes": 18631274, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00023.mds", "bytes": 67079935, "hashes": {}}, "samples": 1101, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00023.mds.zstd", "bytes": 18934789, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00024.mds", "bytes": 64890853, "hashes": {}}, "samples": 1097, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00024.mds.zstd", "bytes": 18242785, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00025.mds", "bytes": 67061679, "hashes": {}}, "samples": 1015, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00025.mds.zstd", "bytes": 17061979, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00026.mds", "bytes": 58558474, "hashes": {}}, "samples": 957, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00026.mds.zstd", "bytes": 16462783, "hashes": {}}}], "version": 2}

arxiv/1-8/tokenize_output.log

@@ -0,0 +1,42 @@
+Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
+Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained.
+Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/1-8...
+Using tokenizer model bclavie/olmo_bert_template...
+Using 1 processes for tokenization, with 1000 items per process.
+
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 64, in sample_dataset_from_config
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 739, in __exit__
+    self.terminate()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 657, in terminate
+    self._terminate()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 224, in __call__
+    res = self._callback(*self._args, **self._kwargs)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 732, in _terminate_pool
+    p.join()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
+    res = self._popen.wait(timeout)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
+    return self.poll(os.WNOHANG if timeout == 0.0 else 0)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
+    pid, sts = os.waitpid(self.pid, flag)
+KeyboardInterrupt
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
+    sample_dataset_from_config(args)
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 63, in sample_dataset_from_config
+    with MDSWriter(out=output_dir, columns=MDS_COLS_PRE_TOKENIZED, compression='zstd') as mds_writer:
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 354, in __exit__
+    self.finish()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 298, in finish
+    self.flush_shard()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 428, in flush_shard
+    raw_data = self.encode_joint_shard()
+KeyboardInterrupt
+

arxiv/2-1/index.json

@@ -0,0 +1 @@
+{"shards": [{"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00000.mds", "bytes": 67050396, "hashes": {}}, "samples": 1178, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00000.mds.zstd", "bytes": 19393002, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00001.mds", "bytes": 67064931, "hashes": {}}, "samples": 1219, "size_limit": 67108864, "version": 2, "zip_data": {"basename": "shard.00001.mds.zstd", "bytes": 19312518, "hashes": {}}}, {"column_encodings": ["str", "str"], "column_names": ["domain", "text"], "column_sizes": [null, null], "compression": "zstd", "format": "mds", "hashes": [], "raw_data": {"basename": "shard.00002.mds", "bytes": 67067964, "hashes": {}}, 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arxiv/2-1/tokenize_output.log

@@ -0,0 +1,45 @@
+Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
+Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained.
+Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/2-1...
+Using tokenizer model bclavie/olmo_bert_template...
+Using 1 processes for tokenization, with 1000 items per process.
+
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 64, in sample_dataset_from_config
+    with mp.Pool(num_processes) as pool:
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 739, in __exit__
+    self.terminate()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 657, in terminate
+    self._terminate()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 224, in __call__
+    res = self._callback(*self._args, **self._kwargs)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 732, in _terminate_pool
+    p.join()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
+    res = self._popen.wait(timeout)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
+    return self.poll(os.WNOHANG if timeout == 0.0 else 0)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
+    pid, sts = os.waitpid(self.pid, flag)
+KeyboardInterrupt
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
+    sample_dataset_from_config(args)
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 63, in sample_dataset_from_config
+    with MDSWriter(out=output_dir, columns=MDS_COLS_PRE_TOKENIZED, compression='zstd') as mds_writer:
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 354, in __exit__
+    self.finish()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 298, in finish
+    self.flush_shard()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 428, in flush_shard
+    raw_data = self.encode_joint_shard()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/mds/writer.py", line 143, in encode_joint_shard
+    sample_data = b''.join(self.new_samples)
+KeyboardInterrupt
+

arxiv/2-6/index.json

@@ -0,0 +1 @@
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arxiv/2-6/tokenize_output.log

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+Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
+Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained.
+Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/2-6...
+Using tokenizer model bclavie/olmo_bert_template...
+Using 1 processes for tokenization, with 1000 items per process.
+
+Traceback (most recent call last):
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 314, in _bootstrap
+    self.run()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 108, in run
+    self._target(*self._args, **self._kwargs)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 114, in worker
+    task = get()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/queues.py", line 365, in get
+    res = self._reader.recv_bytes()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/connection.py", line 216, in recv_bytes
+    buf = self._recv_bytes(maxlength)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/connection.py", line 414, in _recv_bytes
+    buf = self._recv(4)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/connection.py", line 379, in _recv
+    chunk = read(handle, remaining)
+KeyboardInterrupt
+Traceback (most recent call last):
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/dataset.py", line 1235, in get_item
+    sample = shard[shard_sample_id]
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/array.py", line 90, in __getitem__
+    return self.get_item(at)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/reader.py", line 319, in get_item
+    data = self.get_sample_data(idx)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/mds/reader.py", line 138, in get_sample_data
+    with open(filename, 'rb', 0) as fp:
+FileNotFoundError: [Errno 2] No such file or directory: '/home/oweller/bert24-data/data/ProLong_text/arxiv/2-6/shard.00012.mds'
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/dataset.py", line 1252, in get_item
+    self.prepare_shard(shard_id)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/dataset.py", line 1199, in prepare_shard
+    delta = stream.prepare_shard(shard)  # Decompress and remove zip.
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/stream.py", line 421, in prepare_shard
+    delta += self._prepare_shard_part(raw_info, zip_info, shard.compression)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/stream.py", line 389, in _prepare_shard_part
+    self._decompress_shard_part(zip_info, zip_filename, raw_filename, compression)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/stream.py", line 339, in _decompress_shard_part
+    data = decompress(compression, data)  # pyright: ignore
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/compression.py", line 258, in decompress
+    return obj.decompress(data)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/compression.py", line 156, in decompress
+    return zstd.decompress(data)
+KeyboardInterrupt
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 74, in sample_dataset_from_config
+    chunk = [dataset[k] for k in range(start, end)]
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 74, in <listcomp>
+    chunk = [dataset[k] for k in range(start, end)]
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/array.py", line 90, in __getitem__
+    return self.get_item(at)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/dataset.py", line 1252, in get_item
+    self.prepare_shard(shard_id)
+KeyboardInterrupt
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 64, in sample_dataset_from_config
+    with mp.Pool(num_processes) as pool:
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 739, in __exit__
+    self.terminate()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 657, in terminate
+    self._terminate()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 224, in __call__
+    res = self._callback(*self._args, **self._kwargs)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 732, in _terminate_pool
+    p.join()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
+    res = self._popen.wait(timeout)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
+    return self.poll(os.WNOHANG if timeout == 0.0 else 0)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
+    pid, sts = os.waitpid(self.pid, flag)
+KeyboardInterrupt
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
+    sample_dataset_from_config(args)
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 63, in sample_dataset_from_config
+    with MDSWriter(out=output_dir, columns=MDS_COLS_PRE_TOKENIZED, compression='zstd') as mds_writer:
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 354, in __exit__
+    self.finish()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 298, in finish
+    self.flush_shard()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 428, in flush_shard
+    raw_data = self.encode_joint_shard()
+KeyboardInterrupt
+

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arxiv/4-1/tokenize_output.log

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+Because `predownload` was not specified, it will default to 8*batch_size if batch_size is not None, otherwise 64. Prior to Streaming v0.7.0, `predownload` defaulted to max(batch_size, 256 * batch_size // num_canonical_nodes).
+Special tokens have been added in the vocabulary, make sure the associated word embeddings are fine-tuned or trained.
+Using local dataset /home/oweller/bert24-data/data/ProLong_text/arxiv/4-1...
+Using tokenizer model bclavie/olmo_bert_template...
+Using 1 processes for tokenization, with 1000 items per process.
+
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 64, in sample_dataset_from_config
+    with mp.Pool(num_processes) as pool:
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 739, in __exit__
+    self.terminate()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 657, in terminate
+    self._terminate()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/util.py", line 224, in __call__
+    res = self._callback(*self._args, **self._kwargs)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/pool.py", line 732, in _terminate_pool
+    p.join()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/process.py", line 149, in join
+    res = self._popen.wait(timeout)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 43, in wait
+    return self.poll(os.WNOHANG if timeout == 0.0 else 0)
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/multiprocessing/popen_fork.py", line 27, in poll
+    pid, sts = os.waitpid(self.pid, flag)
+KeyboardInterrupt
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/logging/__init__.py", line 1732, in isEnabledFor
+    return self._cache[level]
+KeyError: 10
+
+During handling of the above exception, another exception occurred:
+
+Traceback (most recent call last):
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 108, in <module>
+    sample_dataset_from_config(args)
+  File "/home/oweller/bert24-data/src/bert24_data/tokenization/tokenize_mds.py", line 63, in sample_dataset_from_config
+    with MDSWriter(out=output_dir, columns=MDS_COLS_PRE_TOKENIZED, compression='zstd') as mds_writer:
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 354, in __exit__
+    self.finish()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 300, in finish
+    self._write_index()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/streaming/base/format/base/writer.py", line 286, in _write_index
+    logger.debug(
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/logging/__init__.py", line 1464, in debug
+    if self.isEnabledFor(DEBUG):
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/logging/__init__.py", line 1736, in isEnabledFor
+    if self.manager.disable >= level:
+KeyboardInterrupt
+Exception ignored in atexit callback: <bound method finalize._exitfunc of <class 'weakref.finalize'>>
+Traceback (most recent call last):
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/weakref.py", line 667, in _exitfunc
+    f()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/weakref.py", line 591, in __call__
+    return info.func(*info.args, **(info.kwargs or {}))
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/urllib3/connectionpool.py", line 1180, in _close_pool_connections
+    conn.close()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/site-packages/urllib3/connection.py", line 275, in close
+    super().close()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/http/client.py", line 961, in close
+    sock.close()   # close it manually... there may be other refs
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/socket.py", line 502, in close
+    self._real_close()
+  File "/home/oweller/miniconda3/envs/bert24/lib/python3.10/ssl.py", line 1366, in _real_close
+    super()._real_close()
+KeyboardInterrupt: 
+

arxiv/4-6/shard.00000.mds.zstd

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