The measurements must still be transmitted to a CAD system that will automatically alter the pattern to conform to specific body measurements.
( ( The measurements ) ( ( ( must still ) ( be ( transmitted ( to ( ( a ( CAD system ) ) ( that ( ( will automatically ) ( alter ( the ( pattern ( to ( conform ( to ( specific ( body measurements ) ) ) ) ) ) ) ) ) ) ) ) ) ) ) . ) )
(ROOT (S (NP (DT The) (NNS measurements)) (VP (MD must) (ADVP (RB still)) (VP (VB be) (VP (VBN transmitted) (PP (TO to) (NP (NP (DT a) (NNP CAD) (NN system)) (SBAR (WHNP (WDT that)) (S (VP (MD will) (ADVP (RB automatically)) (VP (VB alter) (NP (DT the) (NN pattern) (S (VP (TO to) (VP (VB conform) (PP (TO to) (NP (JJ specific) (NN body) (NNS measurements)))))))))))))))) (. .)))
Transmitting the data to a CAD system would go against the intentions of the scientists for this experiment. 
( ( ( Transmitting ( the data ) ) ( to ( a ( CAD system ) ) ) ) ( ( would ( go ( against ( ( the intentions ) ( of ( ( the scientists ) ( for ( this experiment ) ) ) ) ) ) ) ) . ) )
(ROOT (S (S (VP (VBG Transmitting) (NP (DT the) (NNS data)) (PP (TO to) (NP (DT a) (NNP CAD) (NN system))))) (VP (MD would) (VP (VB go) (PP (IN against) (NP (NP (DT the) (NNS intentions)) (PP (IN of) (NP (NP (DT the) (NNS scientists)) (PP (IN for) (NP (DT this) (NN experiment))))))))) (. .)))