text: Although the free-water method likely contains some benthic metabolic signal, isolating the benthic contribution to whole-lake metabolism requires benthic-specific methods. Analogous to the light and dark bottle methods described above, lake sediment cores can be collected and changes in dissolved oxygen or carbon fixation can be used to estimate rates of primary productivity and respiration. Relatively new methods describe isolating the sediment-water interface with transparent domes and measure changes in dissolved oxygen in-situ, which is a hybrid between the free-water method and light-dark bottle method. These in-situ benthic chamber methods allow for relatively easy multi-day estimate of benthic metabolism, which helps the researcher determine how benthic metabolism changes with varying weather patterns and lake characteristics.